RNA–Protein interactions for RNA: ENST00000570587.5

KCNAB3-202, Transcript of potassium voltage-gated channel subfamily A regulatory beta subunit 3, humanhuman

TSL 1 (best)

Gene KCNAB3, Length 2,406 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNAB3-202ENST00000570587 KIF2CQ99661 725 aa16.62■□□□□ 0.25
KCNAB3-202ENST00000570587 TNNQ9UQP3 1299 aa16.62■□□□□ 0.25
KCNAB3-202ENST00000570587 RIMBP3CA6NJZ7 1639 aa16.61■□□□□ 0.25
KCNAB3-202ENST00000570587 RIMBP3BA6NNM3 1639 aa16.61■□□□□ 0.25
KCNAB3-202ENST00000570587 RIMBP3Q9UFD9 1639 aa16.61■□□□□ 0.25
KCNAB3-202ENST00000570587 ABCC1P33527 1531 aa16.61■□□□□ 0.25
KCNAB3-202ENST00000570587 IQGAP3Q86VI3 1631 aa16.6■□□□□ 0.25
KCNAB3-202ENST00000570587 GTF2F1P35269 517 aaKnown RBP eCLIP16.6■□□□□ 0.25
KCNAB3-202ENST00000570587 CDCA8Q53HL2 280 aa16.6■□□□□ 0.25
KCNAB3-202ENST00000570587 TAF3Q5VWG9 929 aa16.6■□□□□ 0.25
KCNAB3-202ENST00000570587 PRIMPOLQ96LW4 560 aa16.6■□□□□ 0.25
KCNAB3-202ENST00000570587 CAVIN1Q6NZI2 390 aaKnown RBP16.6■□□□□ 0.25
KCNAB3-202ENST00000570587 KLHL34Q8N239 644 aa16.6■□□□□ 0.25
KCNAB3-202ENST00000570587 PRIM1P49642 420 aaKnown RBP16.59■□□□□ 0.25
KCNAB3-202ENST00000570587 HMGN5P82970 282 aaKnown RBP16.59■□□□□ 0.25
KCNAB3-202ENST00000570587 CD2BP2O95400 341 aaKnown RBP16.58■□□□□ 0.24
KCNAB3-202ENST00000570587 ZNF710Q8N1W2 664 aa16.58■□□□□ 0.24
KCNAB3-202ENST00000570587 SPAG9O60271 1321 aaKnown RBP16.57■□□□□ 0.24
KCNAB3-202ENST00000570587 KIAA2012Q0VF49 1180 aa16.57■□□□□ 0.24
KCNAB3-202ENST00000570587 IPO4Q8TEX9 1081 aaKnown RBP16.57■□□□□ 0.24
KCNAB3-202ENST00000570587 LMBRD1Q9NUN5 540 aa16.57■□□□□ 0.24
KCNAB3-202ENST00000570587 KANK1Q14678 1352 aa16.57■□□□□ 0.24
KCNAB3-202ENST00000570587 CBX1P83916 185 aa16.57■□□□□ 0.24
KCNAB3-202ENST00000570587 FOXD4L1Q9NU39 408 aa16.57■□□□□ 0.24
KCNAB3-202ENST00000570587 NPM1P06748 294 aaKnown RBP eCLIP16.56■□□□□ 0.24
KCNAB3-202ENST00000570587 GAS2L2Q8NHY3 880 aa16.56■□□□□ 0.24
KCNAB3-202ENST00000570587 PHF23Q9BUL5 403 aaPredicted RBP16.56■□□□□ 0.24
KCNAB3-202ENST00000570587 TMEM51Q9NW97 253 aa16.56■□□□□ 0.24
KCNAB3-202ENST00000570587 WDR63Q8IWG1 891 aa16.56■□□□□ 0.24
KCNAB3-202ENST00000570587 NUCB2P80303 420 aa16.55■□□□□ 0.24
KCNAB3-202ENST00000570587 MCTP1Q6DN14 999 aa16.55■□□□□ 0.24
KCNAB3-202ENST00000570587 ZKSCAN2Q63HK3 967 aa16.55■□□□□ 0.24
KCNAB3-202ENST00000570587 LRSAM1Q6UWE0 723 aa16.55■□□□□ 0.24
KCNAB3-202ENST00000570587 DZIP1LQ8IYY4 767 aaKnown RBP16.55■□□□□ 0.24
KCNAB3-202ENST00000570587 MYOM1P52179 1685 aa16.54■□□□□ 0.24
KCNAB3-202ENST00000570587 BCL2L13Q9BXK5 485 aa16.54■□□□□ 0.24
KCNAB3-202ENST00000570587 POLR3AO14802 1390 aaPredicted RBP16.54■□□□□ 0.24
KCNAB3-202ENST00000570587 CYP2E1P05181 493 aaPredicted RBP16.54■□□□□ 0.24
KCNAB3-202ENST00000570587 FTSJ3Q8IY81 847 aaKnown RBP16.54■□□□□ 0.24
KCNAB3-202ENST00000570587 ATP10AO60312 1499 aa16.53■□□□□ 0.24
KCNAB3-202ENST00000570587 ATP2B3Q16720 1220 aa16.53■□□□□ 0.24
KCNAB3-202ENST00000570587 BMP2KLQ5H9B9 411 aa16.53■□□□□ 0.24
KCNAB3-202ENST00000570587 IQGAP1P46940 1657 aa16.53■□□□□ 0.24
KCNAB3-202ENST00000570587 KIF16BQ96L93 1317 aa16.53■□□□□ 0.24
KCNAB3-202ENST00000570587 IQSEC2Q5JU85 1478 aa16.53■□□□□ 0.24
KCNAB3-202ENST00000570587 ZFYVE16Q7Z3T8 1539 aa16.51■□□□□ 0.23
KCNAB3-202ENST00000570587 NUCB1Q02818 461 aa16.51■□□□□ 0.23
KCNAB3-202ENST00000570587 DDX19BQ9UMR2 479 aa16.51■□□□□ 0.23
KCNAB3-202ENST00000570587 DNTTIP2Q5QJE6 756 aaKnown RBP16.5■□□□□ 0.23
KCNAB3-202ENST00000570587 KIF3AQ9Y496 699 aa16.5■□□□□ 0.23
KCNAB3-202ENST00000570587 CCDC27Q2M243 656 aa16.5■□□□□ 0.23
KCNAB3-202ENST00000570587 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.5■□□□□ 0.23
KCNAB3-202ENST00000570587 GPT2Q8TD30 523 aa16.49■□□□□ 0.23
KCNAB3-202ENST00000570587 PIBF1Q8WXW3 757 aa16.49■□□□□ 0.23
KCNAB3-202ENST00000570587 RUNDC1Q96C34 613 aa16.49■□□□□ 0.23
KCNAB3-202ENST00000570587 CFAP74Q9C0B2 1584 aa16.49■□□□□ 0.23
KCNAB3-202ENST00000570587 CT47B1P0C2W7 299 aaPredicted RBP16.49■□□□□ 0.23
KCNAB3-202ENST00000570587 FANCAO15360 1455 aa16.48■□□□□ 0.23
KCNAB3-202ENST00000570587 RBM42Q9BTD8 480 aaKnown RBP16.48■□□□□ 0.23
KCNAB3-202ENST00000570587 PTMAP06454 111 aaKnown RBP16.47■□□□□ 0.23
KCNAB3-202ENST00000570587 NCBP3Q53F19 620 aaKnown RBP16.47■□□□□ 0.23
KCNAB3-202ENST00000570587 JARID2Q92833 1246 aaPredicted RBP16.47■□□□□ 0.23
KCNAB3-202ENST00000570587 ARAP3Q8WWN8 1544 aa16.46■□□□□ 0.23
KCNAB3-202ENST00000570587 TCP11L2Q8N4U5 519 aa16.46■□□□□ 0.23
KCNAB3-202ENST00000570587 TSC1Q92574 1164 aa16.46■□□□□ 0.23
KCNAB3-202ENST00000570587 TMEM63CQ9P1W3 806 aa16.46■□□□□ 0.23
KCNAB3-202ENST00000570587 RBM27Q9P2N5 1060 aaKnown RBP16.46■□□□□ 0.23
KCNAB3-202ENST00000570587 SHPRHQ149N8 1683 aa16.46■□□□□ 0.23
KCNAB3-202ENST00000570587 SYCE3A1L190 88 aa16.46■□□□□ 0.23
KCNAB3-202ENST00000570587 PRPF40AO75400 957 aaKnown RBP16.46■□□□□ 0.23
KCNAB3-202ENST00000570587 CHD1LQ86WJ1 897 aa16.46■□□□□ 0.23
KCNAB3-202ENST00000570587 PDCL2Q8N4E4 241 aa16.46■□□□□ 0.23
KCNAB3-202ENST00000570587 CWC22Q9HCG8 908 aaKnown RBP16.46■□□□□ 0.23
KCNAB3-202ENST00000570587 ASXL2Q76L83 1435 aa16.46■□□□□ 0.22
KCNAB3-202ENST00000570587 SCAF11Q99590 1463 aaKnown RBP16.45■□□□□ 0.22
KCNAB3-202ENST00000570587 KIF3BO15066 747 aa16.45■□□□□ 0.22
KCNAB3-202ENST00000570587 NOLC1Q14978 699 aaKnown RBP eCLIP16.45■□□□□ 0.22
KCNAB3-202ENST00000570587 NEUROD2Q15784 382 aa16.45■□□□□ 0.22
KCNAB3-202ENST00000570587 BCL2L12Q9HB09 334 aa16.45■□□□□ 0.22
KCNAB3-202ENST00000570587 TRIM27P14373 513 aa16.44■□□□□ 0.22
KCNAB3-202ENST00000570587 RABEP1Q15276 862 aa16.44■□□□□ 0.22
KCNAB3-202ENST00000570587 RRP7AQ9Y3A4 280 aaKnown RBP16.44■□□□□ 0.22
KCNAB3-202ENST00000570587 KDM5AP29375 1690 aaKnown RBP16.44■□□□□ 0.22
KCNAB3-202ENST00000570587 FKBP5Q13451 457 aaPredicted RBP16.44■□□□□ 0.22
KCNAB3-202ENST00000570587 TBC1D9Q6ZT07 1266 aa16.44■□□□□ 0.22
KCNAB3-202ENST00000570587 ITPRIPQ8IWB1 547 aa16.44■□□□□ 0.22
KCNAB3-202ENST00000570587 LNPKQ9C0E8 428 aa16.44■□□□□ 0.22
KCNAB3-202ENST00000570587 ZBTB40Q9NUA8 1239 aa16.44■□□□□ 0.22
KCNAB3-202ENST00000570587 ATP7AQ04656 1500 aa16.43■□□□□ 0.22
KCNAB3-202ENST00000570587 ABCA9Q8IUA7 1624 aa16.43■□□□□ 0.22
KCNAB3-202ENST00000570587 MBD3O95983 291 aa16.43■□□□□ 0.22
KCNAB3-202ENST00000570587 FEZ1Q99689 392 aa16.43■□□□□ 0.22
KCNAB3-202ENST00000570587 SPTLC3Q9NUV7 552 aa16.43■□□□□ 0.22
KCNAB3-202ENST00000570587 ADGRL1O94910 1474 aa16.43■□□□□ 0.22
KCNAB3-202ENST00000570587 MADDQ8WXG6 1647 aa16.43■□□□□ 0.22
KCNAB3-202ENST00000570587 ZNF830Q96NB3 372 aaPredicted RBP16.43■□□□□ 0.22
KCNAB3-202ENST00000570587 AK9Q5TCS8 1911 aa16.42■□□□□ 0.22
KCNAB3-202ENST00000570587 REREQ9P2R6 1566 aa16.42■□□□□ 0.22
KCNAB3-202ENST00000570587 ANKRD7Q92527 254 aa16.42■□□□□ 0.22
KCNAB3-202ENST00000570587 PTPRTO14522 1441 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms