RNA–Protein interactions for RNA: ENST00000566251.1

TUBGCP4-211, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-211ENST00000566251 PNISRQ8TF01 805 aaKnown RBP13.28□□□□□ -0.28
TUBGCP4-211ENST00000566251 ATP7BP35670 1465 aa13.28□□□□□ -0.28
TUBGCP4-211ENST00000566251 CCDC184Q52MB2 194 aa13.27□□□□□ -0.29
TUBGCP4-211ENST00000566251 PPIP5K1Q6PFW1 1433 aa13.27□□□□□ -0.29
TUBGCP4-211ENST00000566251 A0A1W2PP64 1363 aa13.26□□□□□ -0.29
TUBGCP4-211ENST00000566251 ADGRB2O60241 1585 aa13.26□□□□□ -0.29
TUBGCP4-211ENST00000566251 HNRNPUQ00839 825 aaKnown RBP eCLIP13.26□□□□□ -0.29
TUBGCP4-211ENST00000566251 C14orf37Q86TY3 774 aa13.26□□□□□ -0.29
TUBGCP4-211ENST00000566251 SPINK5Q9NQ38 1064 aaPredicted RBP13.26□□□□□ -0.29
TUBGCP4-211ENST00000566251 LTBP4Q8N2S1 1624 aa13.25□□□□□ -0.29
TUBGCP4-211ENST00000566251 PLEKHG3A1L390 1219 aa13.25□□□□□ -0.29
TUBGCP4-211ENST00000566251 CFAP53Q96M91 514 aa13.25□□□□□ -0.29
TUBGCP4-211ENST00000566251 XRN1Q8IZH2 1706 aaKnown RBP13.25□□□□□ -0.29
TUBGCP4-211ENST00000566251 USP32Q8NFA0 1604 aa13.24□□□□□ -0.29
TUBGCP4-211ENST00000566251 WDR43Q15061 677 aaKnown RBP eCLIP13.24□□□□□ -0.29
TUBGCP4-211ENST00000566251 PROSER2Q86WR7 435 aaPredicted RBP13.24□□□□□ -0.29
TUBGCP4-211ENST00000566251 CHD2O14647 1828 aaKnown RBP13.23□□□□□ -0.29
TUBGCP4-211ENST00000566251 EDC4Q6P2E9 1401 aaKnown RBP13.22□□□□□ -0.29
TUBGCP4-211ENST00000566251 ANKARQ7Z5J8 1434 aa13.22□□□□□ -0.29
TUBGCP4-211ENST00000566251 SPRYD3Q8NCJ5 442 aa13.22□□□□□ -0.29
TUBGCP4-211ENST00000566251 NGDNQ8NEJ9 315 aaKnown RBP13.22□□□□□ -0.29
TUBGCP4-211ENST00000566251 IQSEC2Q5JU85 1478 aa13.22□□□□□ -0.29
TUBGCP4-211ENST00000566251 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.22□□□□□ -0.29
TUBGCP4-211ENST00000566251 CPSF1Q10570 1443 aaKnown RBP13.22□□□□□ -0.29
TUBGCP4-211ENST00000566251 INSRP06213 1382 aa13.21□□□□□ -0.29
TUBGCP4-211ENST00000566251 FYB1O15117 783 aa13.21□□□□□ -0.29
TUBGCP4-211ENST00000566251 RGL2O15211 777 aa13.21□□□□□ -0.29
TUBGCP4-211ENST00000566251 TSHZ2Q9NRE2 1034 aa13.21□□□□□ -0.29
TUBGCP4-211ENST00000566251 PRR36Q9H6K5 1346 aa13.2□□□□□ -0.3
TUBGCP4-211ENST00000566251 NUTM2FA1L443 756 aa13.2□□□□□ -0.3
TUBGCP4-211ENST00000566251 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.2□□□□□ -0.3
TUBGCP4-211ENST00000566251 CD163L1Q9NR16 1453 aa13.2□□□□□ -0.3
TUBGCP4-211ENST00000566251 ACEP12821 1306 aa13.19□□□□□ -0.3
TUBGCP4-211ENST00000566251 NKTRP30414 1462 aaKnown RBP13.19□□□□□ -0.3
TUBGCP4-211ENST00000566251 COG3Q96JB2 828 aa13.19□□□□□ -0.3
TUBGCP4-211ENST00000566251 GGNBP2Q9H3C7 697 aa13.19□□□□□ -0.3
TUBGCP4-211ENST00000566251 C19orf44Q9H6X5 657 aa13.19□□□□□ -0.3
TUBGCP4-211ENST00000566251 NCOA3Q9Y6Q9 1424 aa13.19□□□□□ -0.3
TUBGCP4-211ENST00000566251 CDC42BPGQ6DT37 1551 aa13.19□□□□□ -0.3
TUBGCP4-211ENST00000566251 POLR3AO14802 1390 aaPredicted RBP13.19□□□□□ -0.3
TUBGCP4-211ENST00000566251 TNNT2P45379 298 aaPredicted RBP13.18□□□□□ -0.3
TUBGCP4-211ENST00000566251 ZBTB12Q9Y330 459 aaPredicted RBP13.18□□□□□ -0.3
TUBGCP4-211ENST00000566251 ADGRL3Q9HAR2 1447 aa13.18□□□□□ -0.3
TUBGCP4-211ENST00000566251 ZBED9Q6R2W3 1325 aa13.17□□□□□ -0.3
TUBGCP4-211ENST00000566251 TTC21AQ8NDW8 1320 aa13.17□□□□□ -0.3
TUBGCP4-211ENST00000566251 NWD1Q149M9 1564 aa13.17□□□□□ -0.3
TUBGCP4-211ENST00000566251 NUDCQ9Y266 331 aa13.17□□□□□ -0.3
TUBGCP4-211ENST00000566251 ATF3P18847 181 aa13.16□□□□□ -0.3
TUBGCP4-211ENST00000566251 MTHFSP49914 203 aa13.16□□□□□ -0.3
TUBGCP4-211ENST00000566251 ITSN1Q15811 1721 aa13.16□□□□□ -0.3
TUBGCP4-211ENST00000566251 TTC21BQ7Z4L5 1316 aa13.15□□□□□ -0.3
TUBGCP4-211ENST00000566251 NGEFQ8N5V2 710 aa13.15□□□□□ -0.3
TUBGCP4-211ENST00000566251 PMFBP1Q8TBY8 1022 aa13.15□□□□□ -0.3
TUBGCP4-211ENST00000566251 PHF8Q9UPP1 1060 aa13.15□□□□□ -0.3
TUBGCP4-211ENST00000566251 UBAP1LF5GYI3 381 aa13.14□□□□□ -0.31
TUBGCP4-211ENST00000566251 PNNQ9H307 717 aaKnown RBP13.14□□□□□ -0.31
TUBGCP4-211ENST00000566251 USP6P35125 1406 aa13.13□□□□□ -0.31
TUBGCP4-211ENST00000566251 PSME1Q06323 249 aa13.13□□□□□ -0.31
TUBGCP4-211ENST00000566251 ESCO1Q5FWF5 840 aa13.13□□□□□ -0.31
TUBGCP4-211ENST00000566251 CADPS2Q86UW7 1296 aa13.13□□□□□ -0.31
TUBGCP4-211ENST00000566251 ADAMTS8Q9UP79 889 aa13.13□□□□□ -0.31
TUBGCP4-211ENST00000566251 ZNF335Q9H4Z2 1342 aaPredicted RBP13.13□□□□□ -0.31
TUBGCP4-211ENST00000566251 NME9Q86XW9 330 aa13.12□□□□□ -0.31
TUBGCP4-211ENST00000566251 FMN2Q9NZ56 1722 aa13.12□□□□□ -0.31
TUBGCP4-211ENST00000566251 TOPAZ1Q8N9V7 1692 aa13.12□□□□□ -0.31
TUBGCP4-211ENST00000566251 AATKQ6ZMQ8 1374 aa13.11□□□□□ -0.31
TUBGCP4-211ENST00000566251 PDE3BQ13370 1112 aa13.11□□□□□ -0.31
TUBGCP4-211ENST00000566251 RBM33Q96EV2 1170 aaKnown RBP13.11□□□□□ -0.31
TUBGCP4-211ENST00000566251 KIF20BQ96Q89 1820 aa13.11□□□□□ -0.31
TUBGCP4-211ENST00000566251 MON2Q7Z3U7 1717 aa13.1□□□□□ -0.31
TUBGCP4-211ENST00000566251 MSH6P52701 1360 aa13.1□□□□□ -0.31
TUBGCP4-211ENST00000566251 TMEM94Q12767 1356 aa13.1□□□□□ -0.31
TUBGCP4-211ENST00000566251 AKAP12Q02952 1782 aa13.1□□□□□ -0.31
TUBGCP4-211ENST00000566251 CAPN15O75808 1086 aa13.1□□□□□ -0.31
TUBGCP4-211ENST00000566251 DCCP43146 1447 aa13.1□□□□□ -0.31
TUBGCP4-211ENST00000566251 ANKRD26Q9UPS8 1709 aa13.1□□□□□ -0.31
TUBGCP4-211ENST00000566251 DIAPH1O60610 1272 aaKnown RBP13.09□□□□□ -0.31
TUBGCP4-211ENST00000566251 PAK3O75914 559 aaPredicted RBP13.09□□□□□ -0.31
TUBGCP4-211ENST00000566251 NALCNQ8IZF0 1738 aa13.08□□□□□ -0.32
TUBGCP4-211ENST00000566251 BLMP54132 1417 aaPredicted RBP13.08□□□□□ -0.32
TUBGCP4-211ENST00000566251 NEFMP07197 916 aa13.08□□□□□ -0.32
TUBGCP4-211ENST00000566251 USP31Q70CQ4 1352 aa13.07□□□□□ -0.32
TUBGCP4-211ENST00000566251 SSH2Q76I76 1423 aa13.07□□□□□ -0.32
TUBGCP4-211ENST00000566251 PPM1GO15355 546 aaPredicted RBP13.07□□□□□ -0.32
TUBGCP4-211ENST00000566251 U2AF1L5P0DN76 240 aaPredicted RBP13.07□□□□□ -0.32
TUBGCP4-211ENST00000566251 NLRP6P59044 892 aa13.07□□□□□ -0.32
TUBGCP4-211ENST00000566251 U2AF1Q01081 240 aaKnown RBP eCLIP13.07□□□□□ -0.32
TUBGCP4-211ENST00000566251 PLCD3Q8N3E9 789 aa13.07□□□□□ -0.32
TUBGCP4-211ENST00000566251 ABTB2Q8N961 1025 aa13.07□□□□□ -0.32
TUBGCP4-211ENST00000566251 RUNDC1Q96C34 613 aa13.07□□□□□ -0.32
TUBGCP4-211ENST00000566251 POLKQ9UBT6 870 aa13.07□□□□□ -0.32
TUBGCP4-211ENST00000566251 U2SURPO15042 1029 aaKnown RBP13.06□□□□□ -0.32
TUBGCP4-211ENST00000566251 NEFLP07196 543 aa13.05□□□□□ -0.32
TUBGCP4-211ENST00000566251 ZRANB1Q9UGI0 708 aa13.05□□□□□ -0.32
TUBGCP4-211ENST00000566251 PNPLA6Q8IY17 1366 aa13.05□□□□□ -0.32
TUBGCP4-211ENST00000566251 C1orf167Q5SNV9 1468 aa13.04□□□□□ -0.32
TUBGCP4-211ENST00000566251 ORAI2Q96SN7 254 aa13.04□□□□□ -0.32
TUBGCP4-211ENST00000566251 MED1Q15648 1581 aaPredicted RBP13.03□□□□□ -0.32
TUBGCP4-211ENST00000566251 FOXO3O43524 673 aa13.03□□□□□ -0.32
TUBGCP4-211ENST00000566251 HSPA1LP34931 641 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms