RNA–Protein interactions for RNA: ENST00000564511.1

TUBGCP4-209, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-209ENST00000564511 UHRF1BP1Q6BDS2 1440 aa8.67□□□□□ -1.02
TUBGCP4-209ENST00000564511 BLOC1S3Q6QNY0 202 aa8.67□□□□□ -1.02
TUBGCP4-209ENST00000564511 METTL3Q86U44 580 aaKnown RBP8.67□□□□□ -1.02
TUBGCP4-209ENST00000564511 ARHGEF12Q9NZN5 1544 aa8.66□□□□□ -1.02
TUBGCP4-209ENST00000564511 ACTN4O43707 911 aaKnown RBP8.66□□□□□ -1.02
TUBGCP4-209ENST00000564511 EFCAB2Q5VUJ9 269 aa8.66□□□□□ -1.02
TUBGCP4-209ENST00000564511 PREX1Q8TCU6 1659 aa8.65□□□□□ -1.02
TUBGCP4-209ENST00000564511 PLCH2O75038 1416 aa8.65□□□□□ -1.02
TUBGCP4-209ENST00000564511 C9orf84Q5VXU9 1444 aa8.65□□□□□ -1.02
TUBGCP4-209ENST00000564511 KMT5BQ4FZB7 885 aa8.65□□□□□ -1.02
TUBGCP4-209ENST00000564511 PRKD2Q9BZL6 878 aa8.65□□□□□ -1.02
TUBGCP4-209ENST00000564511 ESF1Q9H501 851 aaKnown RBP8.65□□□□□ -1.02
TUBGCP4-209ENST00000564511 ATP1B4Q9UN42 357 aaPredicted RBP8.65□□□□□ -1.02
TUBGCP4-209ENST00000564511 STRCQ7RTU9 1775 aa8.64□□□□□ -1.03
TUBGCP4-209ENST00000564511 CFHP08603 1231 aa8.64□□□□□ -1.03
TUBGCP4-209ENST00000564511 AFAP1Q8N556 730 aa8.64□□□□□ -1.03
TUBGCP4-209ENST00000564511 PTPRTO14522 1441 aa8.63□□□□□ -1.03
TUBGCP4-209ENST00000564511 UBAP1LF5GYI3 381 aa8.62□□□□□ -1.03
TUBGCP4-209ENST00000564511 GPIHBP1Q8IV16 184 aa8.62□□□□□ -1.03
TUBGCP4-209ENST00000564511 CDK13Q14004 1512 aaKnown RBP8.61□□□□□ -1.03
TUBGCP4-209ENST00000564511 NLRP7Q8WX94 980 aa8.61□□□□□ -1.03
TUBGCP4-209ENST00000564511 PHOX2BQ99453 314 aa8.61□□□□□ -1.03
TUBGCP4-209ENST00000564511 TMUB1Q9BVT8 246 aa8.61□□□□□ -1.03
TUBGCP4-209ENST00000564511 DAXXQ9UER7 740 aaPredicted RBP8.61□□□□□ -1.03
TUBGCP4-209ENST00000564511 CDK11AQ9UQ88 783 aaPredicted RBP8.61□□□□□ -1.03
TUBGCP4-209ENST00000564511 TLL1O43897 1013 aa8.6□□□□□ -1.03
TUBGCP4-209ENST00000564511 GGCXP38435 758 aa8.6□□□□□ -1.03
TUBGCP4-209ENST00000564511 V9GY48 417 aaPredicted RBP8.6□□□□□ -1.03
TUBGCP4-209ENST00000564511 LTBP4Q8N2S1 1624 aa8.6□□□□□ -1.03
TUBGCP4-209ENST00000564511 TRAPPC8Q9Y2L5 1435 aa8.6□□□□□ -1.03
TUBGCP4-209ENST00000564511 MED1Q15648 1581 aaPredicted RBP8.6□□□□□ -1.03
TUBGCP4-209ENST00000564511 ZNF518AQ6AHZ1 1483 aa8.59□□□□□ -1.03
TUBGCP4-209ENST00000564511 IQSEC2Q5JU85 1478 aa8.58□□□□□ -1.04
TUBGCP4-209ENST00000564511 RSPH4AQ5TD94 716 aa8.58□□□□□ -1.04
TUBGCP4-209ENST00000564511 ZNF335Q9H4Z2 1342 aaPredicted RBP8.57□□□□□ -1.04
TUBGCP4-209ENST00000564511 SETD1BQ9UPS6 1966 aaKnown RBP8.57□□□□□ -1.04
TUBGCP4-209ENST00000564511 NCOA1Q15788 1441 aa8.57□□□□□ -1.04
TUBGCP4-209ENST00000564511 RNF223E7ERA6 249 aa8.57□□□□□ -1.04
TUBGCP4-209ENST00000564511 GFRA3O60609 400 aa8.57□□□□□ -1.04
TUBGCP4-209ENST00000564511 PUS10Q3MIT2 529 aaKnown RBP8.57□□□□□ -1.04
TUBGCP4-209ENST00000564511 SCUBE3Q8IX30 993 aa8.57□□□□□ -1.04
TUBGCP4-209ENST00000564511 ARHGAP5Q13017 1502 aa8.56□□□□□ -1.04
TUBGCP4-209ENST00000564511 DDX11L8A8MPP1 907 aa8.56□□□□□ -1.04
TUBGCP4-209ENST00000564511 NR1I2O75469 434 aa8.56□□□□□ -1.04
TUBGCP4-209ENST00000564511 Q6ZNB5 142 aa8.56□□□□□ -1.04
TUBGCP4-209ENST00000564511 PPEF1O14829 653 aaPredicted RBP8.55□□□□□ -1.04
TUBGCP4-209ENST00000564511 LAPTM4AQ15012 233 aa8.55□□□□□ -1.04
TUBGCP4-209ENST00000564511 RDH13Q8NBN7 331 aa8.55□□□□□ -1.04
TUBGCP4-209ENST00000564511 DIP2CQ9Y2E4 1556 aa8.55□□□□□ -1.04
TUBGCP4-209ENST00000564511 C3P01024 1663 aa8.55□□□□□ -1.04
TUBGCP4-209ENST00000564511 MYO5CQ9NQX4 1742 aa8.54□□□□□ -1.04
TUBGCP4-209ENST00000564511 KDM5CP41229 1560 aa8.54□□□□□ -1.04
TUBGCP4-209ENST00000564511 MLH3Q9UHC1 1453 aa8.54□□□□□ -1.04
TUBGCP4-209ENST00000564511 S1PR4O95977 384 aa8.54□□□□□ -1.04
TUBGCP4-209ENST00000564511 EMID1Q96A84 441 aaPredicted RBP8.54□□□□□ -1.04
TUBGCP4-209ENST00000564511 CAMSAP1Q5T5Y3 1602 aa8.54□□□□□ -1.04
TUBGCP4-209ENST00000564511 EEA1Q15075 1411 aa8.54□□□□□ -1.04
TUBGCP4-209ENST00000564511 CNTLNQ9NXG0 1405 aa8.54□□□□□ -1.04
TUBGCP4-209ENST00000564511 REREQ9P2R6 1566 aa8.53□□□□□ -1.04
TUBGCP4-209ENST00000564511 ADH1BP00325 375 aa8.53□□□□□ -1.04
TUBGCP4-209ENST00000564511 UBTFP17480 764 aaKnown RBP8.53□□□□□ -1.04
TUBGCP4-209ENST00000564511 PIP4K2BP78356 416 aa8.53□□□□□ -1.04
TUBGCP4-209ENST00000564511 KIF14Q15058 1648 aa8.53□□□□□ -1.04
TUBGCP4-209ENST00000564511 AGLP35573 1532 aa8.53□□□□□ -1.04
TUBGCP4-209ENST00000564511 TROQ12816 1431 aaPredicted RBP8.53□□□□□ -1.04
TUBGCP4-209ENST00000564511 FMN1Q68DA7 1419 aa8.53□□□□□ -1.04
TUBGCP4-209ENST00000564511 ZMYM3Q14202 1370 aa8.52□□□□□ -1.05
TUBGCP4-209ENST00000564511 ABCA6Q8N139 1617 aa8.52□□□□□ -1.05
TUBGCP4-209ENST00000564511 TULP1O00294 542 aaPredicted RBP8.52□□□□□ -1.05
TUBGCP4-209ENST00000564511 HSPA1LP34931 641 aa8.52□□□□□ -1.05
TUBGCP4-209ENST00000564511 GCGRP47871 477 aa8.52□□□□□ -1.05
TUBGCP4-209ENST00000564511 MAP2K5Q13163 448 aa8.52□□□□□ -1.05
TUBGCP4-209ENST00000564511 CLIP1P30622 1438 aa8.52□□□□□ -1.05
TUBGCP4-209ENST00000564511 LCE2BO14633 110 aa8.51□□□□□ -1.05
TUBGCP4-209ENST00000564511 IRF6O14896 467 aa8.51□□□□□ -1.05
TUBGCP4-209ENST00000564511 SLC19A1P41440 591 aa8.51□□□□□ -1.05
TUBGCP4-209ENST00000564511 FUT2Q10981 343 aa8.51□□□□□ -1.05
TUBGCP4-209ENST00000564511 MORN1Q5T089 497 aa8.51□□□□□ -1.05
TUBGCP4-209ENST00000564511 SULF1Q8IWU6 871 aa8.51□□□□□ -1.05
TUBGCP4-209ENST00000564511 ANKLE1Q8NAG6 615 aa8.51□□□□□ -1.05
TUBGCP4-209ENST00000564511 NPATQ14207 1427 aa8.51□□□□□ -1.05
TUBGCP4-209ENST00000564511 NRG2O14511 850 aaPredicted RBP8.5□□□□□ -1.05
TUBGCP4-209ENST00000564511 TOM1O60784 492 aa8.5□□□□□ -1.05
TUBGCP4-209ENST00000564511 ATP6V1AP38606 617 aa8.5□□□□□ -1.05
TUBGCP4-209ENST00000564511 SPSB2Q99619 263 aa8.5□□□□□ -1.05
TUBGCP4-209ENST00000564511 SLC6A16Q9GZN6 736 aa8.5□□□□□ -1.05
TUBGCP4-209ENST00000564511 ZNF777Q9ULD5 760 aaPredicted RBP8.5□□□□□ -1.05
TUBGCP4-209ENST00000564511 GGT6Q6P531 493 aa8.49□□□□□ -1.05
TUBGCP4-209ENST00000564511 LIAT1Q6ZQX7 453 aa8.49□□□□□ -1.05
TUBGCP4-209ENST00000564511 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.49□□□□□ -1.05
TUBGCP4-209ENST00000564511 THAP11Q96EK4 314 aa8.48□□□□□ -1.05
TUBGCP4-209ENST00000564511 PDZRN3Q9UPQ7 1066 aa8.48□□□□□ -1.05
TUBGCP4-209ENST00000564511 SLC27A5Q9Y2P5 690 aa8.48□□□□□ -1.05
TUBGCP4-209ENST00000564511 SPAG9O60271 1321 aaKnown RBP8.48□□□□□ -1.05
TUBGCP4-209ENST00000564511 MINK1Q8N4C8 1332 aaPredicted RBP8.48□□□□□ -1.05
TUBGCP4-209ENST00000564511 PLA2R1Q13018 1463 aa8.47□□□□□ -1.05
TUBGCP4-209ENST00000564511 ARHGAP35Q9NRY4 1499 aa8.47□□□□□ -1.05
TUBGCP4-209ENST00000564511 HNRNPMP52272 730 aaKnown RBP eCLIP8.47□□□□□ -1.05
TUBGCP4-209ENST00000564511 SPRYD7Q5W111 196 aa8.47□□□□□ -1.05
TUBGCP4-209ENST00000564511 TRAF7Q6Q0C0 670 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms