RNA–Protein interactions for RNA: ENST00000560986.1

HMG20A-212, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 747 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-212ENST00000560986 FAM9AQ8IZU1 332 aaPredicted RBP8.89□□□□□ -0.99
HMG20A-212ENST00000560986 NESP48681 1621 aa8.89□□□□□ -0.99
HMG20A-212ENST00000560986 RUSC2Q8N2Y8 1516 aa8.89□□□□□ -0.99
HMG20A-212ENST00000560986 MRC2Q9UBG0 1479 aa8.89□□□□□ -0.99
HMG20A-212ENST00000560986 CEP162Q5TB80 1403 aa8.88□□□□□ -0.99
HMG20A-212ENST00000560986 DIXDC1Q155Q3 683 aa8.88□□□□□ -0.99
HMG20A-212ENST00000560986 MYSM1Q5VVJ2 828 aa8.88□□□□□ -0.99
HMG20A-212ENST00000560986 URB2Q14146 1524 aaKnown RBP8.88□□□□□ -0.99
HMG20A-212ENST00000560986 CUX2O14529 1486 aa8.88□□□□□ -0.99
HMG20A-212ENST00000560986 MMP16P51512 607 aa8.87□□□□□ -0.99
HMG20A-212ENST00000560986 HLA-CQ95604 372 aa8.87□□□□□ -0.99
HMG20A-212ENST00000560986 TBC1D2Q9BYX2 928 aa8.87□□□□□ -0.99
HMG20A-212ENST00000560986 POLR3EQ9NVU0 708 aa8.87□□□□□ -0.99
HMG20A-212ENST00000560986 DACH1Q9UI36 760 aa8.87□□□□□ -0.99
HMG20A-212ENST00000560986 CUL7Q14999 1698 aa8.87□□□□□ -0.99
HMG20A-212ENST00000560986 IGF1RP08069 1367 aa8.86□□□□□ -0.99
HMG20A-212ENST00000560986 WDR62O43379 1518 aa8.86□□□□□ -0.99
HMG20A-212ENST00000560986 KDM4AO75164 1064 aa8.86□□□□□ -0.99
HMG20A-212ENST00000560986 AVPP01185 164 aa8.86□□□□□ -0.99
HMG20A-212ENST00000560986 Q3C1V9 767 aa8.86□□□□□ -0.99
HMG20A-212ENST00000560986 CYP4X1Q8N118 509 aa8.86□□□□□ -0.99
HMG20A-212ENST00000560986 CRIPAKQ8N1N5 446 aa8.86□□□□□ -0.99
HMG20A-212ENST00000560986 RAPGEF2Q9Y4G8 1499 aa8.85□□□□□ -0.99
HMG20A-212ENST00000560986 PROCA1Q8NCQ7 364 aaPredicted RBP8.85□□□□□ -0.99
HMG20A-212ENST00000560986 SPIRE2Q8WWL2 714 aa8.85□□□□□ -0.99
HMG20A-212ENST00000560986 ATP1B4Q9UN42 357 aaPredicted RBP8.85□□□□□ -0.99
HMG20A-212ENST00000560986 ZBTB24O43167 697 aaPredicted RBP8.84□□□□□ -0.99
HMG20A-212ENST00000560986 CLK2P49760 499 aaKnown RBP8.84□□□□□ -0.99
HMG20A-212ENST00000560986 USB1Q9BQ65 265 aaKnown RBP8.84□□□□□ -0.99
HMG20A-212ENST00000560986 DXOO77932 396 aaKnown RBP8.83□□□□□ -1
HMG20A-212ENST00000560986 UBTFP17480 764 aaKnown RBP8.83□□□□□ -1
HMG20A-212ENST00000560986 FLIIQ13045 1269 aa8.83□□□□□ -1
HMG20A-212ENST00000560986 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.83□□□□□ -1
HMG20A-212ENST00000560986 KIF21AQ7Z4S6 1674 aa8.83□□□□□ -1
HMG20A-212ENST00000560986 ABCA5Q8WWZ7 1642 aa8.83□□□□□ -1
HMG20A-212ENST00000560986 IFT140Q96RY7 1462 aa8.83□□□□□ -1
HMG20A-212ENST00000560986 WNT7AO00755 349 aa8.82□□□□□ -1
HMG20A-212ENST00000560986 TRIM32Q13049 653 aa8.82□□□□□ -1
HMG20A-212ENST00000560986 NUTM1Q86Y26 1132 aa8.82□□□□□ -1
HMG20A-212ENST00000560986 CARMIL1Q5VZK9 1371 aa8.82□□□□□ -1
HMG20A-212ENST00000560986 CLIP1P30622 1438 aa8.81□□□□□ -1
HMG20A-212ENST00000560986 TARBP1Q13395 1621 aaKnown RBP8.81□□□□□ -1
HMG20A-212ENST00000560986 HOXA2O43364 376 aa8.81□□□□□ -1
HMG20A-212ENST00000560986 USP46P62068 366 aa8.81□□□□□ -1
HMG20A-212ENST00000560986 TTC24A2A3L6 582 aaPredicted RBP8.8□□□□□ -1
HMG20A-212ENST00000560986 AXIN1O15169 862 aa8.8□□□□□ -1
HMG20A-212ENST00000560986 SMPD1P17405 629 aa8.8□□□□□ -1
HMG20A-212ENST00000560986 GUCA2AQ02747 115 aa8.8□□□□□ -1
HMG20A-212ENST00000560986 TRIM26Q12899 539 aaPredicted RBP8.8□□□□□ -1
HMG20A-212ENST00000560986 LCE2AQ5TA79 106 aaPredicted RBP8.8□□□□□ -1
HMG20A-212ENST00000560986 RIC3Q7Z5B4 369 aa8.8□□□□□ -1
HMG20A-212ENST00000560986 ZMYND15Q9H091 742 aa8.8□□□□□ -1
HMG20A-212ENST00000560986 GMPR2Q9P2T1 348 aaKnown RBP8.8□□□□□ -1
HMG20A-212ENST00000560986 LIMD1Q9UGP4 676 aa8.8□□□□□ -1
HMG20A-212ENST00000560986 VPS8Q8N3P4 1428 aa8.8□□□□□ -1
HMG20A-212ENST00000560986 GAPVD1Q14C86 1478 aa8.79□□□□□ -1
HMG20A-212ENST00000560986 SMCPP49901 116 aaPredicted RBP8.79□□□□□ -1
HMG20A-212ENST00000560986 CTC1Q2NKJ3 1217 aa8.79□□□□□ -1
HMG20A-212ENST00000560986 SNIP1Q8TAD8 396 aaKnown RBP8.79□□□□□ -1
HMG20A-212ENST00000560986 MRGPRX2Q96LB1 330 aa8.79□□□□□ -1
HMG20A-212ENST00000560986 MOXD2PA6NHM9 499 aa8.78□□□□□ -1
HMG20A-212ENST00000560986 SPTLC1O15269 473 aa8.78□□□□□ -1
HMG20A-212ENST00000560986 TUSC1Q2TAM9 212 aa8.78□□□□□ -1
HMG20A-212ENST00000560986 RSBN1LQ6PCB5 846 aaPredicted RBP8.78□□□□□ -1
HMG20A-212ENST00000560986 SYMPKQ92797 1274 aaKnown RBP8.78□□□□□ -1
HMG20A-212ENST00000560986 EFCAB5A4FU69 1503 aa8.78□□□□□ -1
HMG20A-212ENST00000560986 J3QL48 77 aa8.77□□□□□ -1.01
HMG20A-212ENST00000560986 TREML4Q6UXN2 200 aa8.77□□□□□ -1.01
HMG20A-212ENST00000560986 ERCC6Q03468 1493 aa8.77□□□□□ -1.01
HMG20A-212ENST00000560986 RAD54L2Q9Y4B4 1467 aa8.77□□□□□ -1.01
HMG20A-212ENST00000560986 NDUFV2P19404 249 aa8.76□□□□□ -1.01
HMG20A-212ENST00000560986 GJA5P36382 358 aa8.76□□□□□ -1.01
HMG20A-212ENST00000560986 SKOR1P84550 965 aa8.76□□□□□ -1.01
HMG20A-212ENST00000560986 CCDC24Q8N4L8 307 aa8.76□□□□□ -1.01
HMG20A-212ENST00000560986 THOC2Q8NI27 1593 aaKnown RBP8.76□□□□□ -1.01
HMG20A-212ENST00000560986 GRIN2BQ13224 1484 aa8.76□□□□□ -1.01
HMG20A-212ENST00000560986 MAP3K1Q13233 1512 aa8.75□□□□□ -1.01
HMG20A-212ENST00000560986 FHAD1B1AJZ9 1412 aa8.75□□□□□ -1.01
HMG20A-212ENST00000560986 RFC5P40937 340 aa8.75□□□□□ -1.01
HMG20A-212ENST00000560986 MCM6Q14566 821 aa8.75□□□□□ -1.01
HMG20A-212ENST00000560986 FBXO31Q5XUX0 539 aaPredicted RBP8.75□□□□□ -1.01
HMG20A-212ENST00000560986 PPP2R2DQ66LE6 453 aa8.75□□□□□ -1.01
HMG20A-212ENST00000560986 C11orf95C9JLR9 678 aaPredicted RBP8.74□□□□□ -1.01
HMG20A-212ENST00000560986 RC3H1Q5TC82 1133 aaKnown RBP8.74□□□□□ -1.01
HMG20A-212ENST00000560986 JUNDP17535 347 aa8.73□□□□□ -1.01
HMG20A-212ENST00000560986 CSPP1Q1MSJ5 1256 aa8.73□□□□□ -1.01
HMG20A-212ENST00000560986 PTCRAQ6ISU1 281 aaPredicted RBP8.73□□□□□ -1.01
HMG20A-212ENST00000560986 PCDHGC3Q9UN70 934 aa8.73□□□□□ -1.01
HMG20A-212ENST00000560986 MAGI1Q96QZ7 1491 aaPredicted RBP8.72□□□□□ -1.01
HMG20A-212ENST00000560986 HPS1Q92902 700 aa8.72□□□□□ -1.01
HMG20A-212ENST00000560986 PCDHB15Q9Y5E8 787 aa8.72□□□□□ -1.01
HMG20A-212ENST00000560986 AQRO60306 1485 aaKnown RBP eCLIP8.71□□□□□ -1.01
HMG20A-212ENST00000560986 LILRB3O75022 631 aa8.71□□□□□ -1.02
HMG20A-212ENST00000560986 WNT7BP56706 349 aa8.71□□□□□ -1.02
HMG20A-212ENST00000560986 QPCTQ16769 361 aa8.71□□□□□ -1.02
HMG20A-212ENST00000560986 TMEM259Q4ZIN3 620 aa8.71□□□□□ -1.02
HMG20A-212ENST00000560986 BANK1Q8NDB2 785 aa8.71□□□□□ -1.02
HMG20A-212ENST00000560986 ATP13A2Q9NQ11 1180 aa8.71□□□□□ -1.02
HMG20A-212ENST00000560986 SPDYE5A6NIY4 337 aa8.7□□□□□ -1.02
HMG20A-212ENST00000560986 FDX1P10109 184 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms