RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 TRIM37O94972 964 aa13.48□□□□□ -0.25
RABGGTA-217ENST00000560521 SAFB2Q14151 953 aaKnown RBP eCLIP13.48□□□□□ -0.25
RABGGTA-217ENST00000560521 CAMTA1Q9Y6Y1 1673 aa13.47□□□□□ -0.25
RABGGTA-217ENST00000560521 SBF2Q86WG5 1849 aa13.46□□□□□ -0.25
RABGGTA-217ENST00000560521 FAM196AQ6ZSG2 479 aa13.46□□□□□ -0.25
RABGGTA-217ENST00000560521 PRAM1Q96QH2 718 aa13.46□□□□□ -0.25
RABGGTA-217ENST00000560521 DHX57Q6P158 1386 aaKnown RBP13.45□□□□□ -0.26
RABGGTA-217ENST00000560521 APBA3O96018 575 aa13.45□□□□□ -0.26
RABGGTA-217ENST00000560521 CFAP70Q5T0N1 1121 aa13.45□□□□□ -0.26
RABGGTA-217ENST00000560521 PHRF1Q9P1Y6 1649 aaKnown RBP13.45□□□□□ -0.26
RABGGTA-217ENST00000560521 ANKARQ7Z5J8 1434 aa13.45□□□□□ -0.26
RABGGTA-217ENST00000560521 CHD4Q14839 1912 aa13.45□□□□□ -0.26
RABGGTA-217ENST00000560521 SPATA31A1Q5TZJ5 1347 aa13.44□□□□□ -0.26
RABGGTA-217ENST00000560521 PARD3Q8TEW0 1356 aa13.44□□□□□ -0.26
RABGGTA-217ENST00000560521 DLC1Q96QB1 1528 aa13.44□□□□□ -0.26
RABGGTA-217ENST00000560521 ITSN1Q15811 1721 aa13.43□□□□□ -0.26
RABGGTA-217ENST00000560521 PRR36Q9H6K5 1346 aa13.42□□□□□ -0.26
RABGGTA-217ENST00000560521 ACIN1Q9UKV3 1341 aaKnown RBP13.42□□□□□ -0.26
RABGGTA-217ENST00000560521 PRDM11Q9NQV5 511 aa13.42□□□□□ -0.26
RABGGTA-217ENST00000560521 GPRASP1Q5JY77 1395 aa13.42□□□□□ -0.26
RABGGTA-217ENST00000560521 POGKQ9P215 609 aa13.41□□□□□ -0.26
RABGGTA-217ENST00000560521 CHRNA2Q15822 529 aa13.4□□□□□ -0.26
RABGGTA-217ENST00000560521 NBPF8Q3BBV2 869 aa13.4□□□□□ -0.26
RABGGTA-217ENST00000560521 NBPF14Q5TI25 921 aa13.4□□□□□ -0.26
RABGGTA-217ENST00000560521 MPHOSPH9Q99550 1183 aa13.4□□□□□ -0.26
RABGGTA-217ENST00000560521 HIRIP3Q9BW71 556 aaPredicted RBP13.4□□□□□ -0.26
RABGGTA-217ENST00000560521 TULP4Q9NRJ4 1543 aa13.39□□□□□ -0.27
RABGGTA-217ENST00000560521 PARP4Q9UKK3 1724 aaKnown RBP13.39□□□□□ -0.27
RABGGTA-217ENST00000560521 KCNQ2O43526 872 aa13.39□□□□□ -0.27
RABGGTA-217ENST00000560521 PAK3O75914 559 aaPredicted RBP13.39□□□□□ -0.27
RABGGTA-217ENST00000560521 STRN4Q9NRL3 753 aa13.39□□□□□ -0.27
RABGGTA-217ENST00000560521 KIAA0232Q92628 1395 aa13.39□□□□□ -0.27
RABGGTA-217ENST00000560521 CASZ1Q86V15 1759 aa13.39□□□□□ -0.27
RABGGTA-217ENST00000560521 RGPD3A6NKT7 1758 aaPredicted RBP13.38□□□□□ -0.27
RABGGTA-217ENST00000560521 RGPD4Q7Z3J3 1758 aa13.38□□□□□ -0.27
RABGGTA-217ENST00000560521 ADGRB1O14514 1584 aa13.38□□□□□ -0.27
RABGGTA-217ENST00000560521 SPON1Q9HCB6 807 aa13.38□□□□□ -0.27
RABGGTA-217ENST00000560521 USP35Q9P2H5 1018 aa13.38□□□□□ -0.27
RABGGTA-217ENST00000560521 PPP1R1BQ9UD71 204 aaPredicted RBP13.38□□□□□ -0.27
RABGGTA-217ENST00000560521 PDE3BQ13370 1112 aa13.37□□□□□ -0.27
RABGGTA-217ENST00000560521 BARGINQ6ZT62 677 aa13.37□□□□□ -0.27
RABGGTA-217ENST00000560521 NGDNQ8NEJ9 315 aaKnown RBP13.37□□□□□ -0.27
RABGGTA-217ENST00000560521 MINK1Q8N4C8 1332 aaPredicted RBP13.37□□□□□ -0.27
RABGGTA-217ENST00000560521 PEAK1Q9H792 1746 aa13.36□□□□□ -0.27
RABGGTA-217ENST00000560521 NINLQ9Y2I6 1382 aa13.36□□□□□ -0.27
RABGGTA-217ENST00000560521 WASLO00401 505 aaPredicted RBP13.36□□□□□ -0.27
RABGGTA-217ENST00000560521 ZC3H6P61129 1189 aaKnown RBP13.36□□□□□ -0.27
RABGGTA-217ENST00000560521 TRAK1Q9UPV9 953 aa13.36□□□□□ -0.27
RABGGTA-217ENST00000560521 LMO7Q8WWI1 1683 aa13.36□□□□□ -0.27
RABGGTA-217ENST00000560521 ARHGEF28Q8N1W1 1705 aaKnown RBP13.36□□□□□ -0.27
RABGGTA-217ENST00000560521 DCAF8L1A6NGE4 600 aa13.35□□□□□ -0.27
RABGGTA-217ENST00000560521 EIF3AQ14152 1382 aaKnown RBP13.34□□□□□ -0.27
RABGGTA-217ENST00000560521 UTRNP46939 3433 aa13.34□□□□□ -0.27
RABGGTA-217ENST00000560521 SSH2Q76I76 1423 aa13.34□□□□□ -0.27
RABGGTA-217ENST00000560521 EVA1CP58658 441 aa13.34□□□□□ -0.27
RABGGTA-217ENST00000560521 MYOM1P52179 1685 aa13.34□□□□□ -0.27
RABGGTA-217ENST00000560521 NRKQ7Z2Y5 1582 aa13.33□□□□□ -0.28
RABGGTA-217ENST00000560521 NUTM2GQ5VZR2 741 aa13.33□□□□□ -0.28
RABGGTA-217ENST00000560521 LARP1Q6PKG0 1096 aaKnown RBP13.33□□□□□ -0.28
RABGGTA-217ENST00000560521 TOPAZ1Q8N9V7 1692 aa13.33□□□□□ -0.28
RABGGTA-217ENST00000560521 AKAP12Q02952 1782 aa13.32□□□□□ -0.28
RABGGTA-217ENST00000560521 WNK3Q9BYP7 1800 aa13.32□□□□□ -0.28
RABGGTA-217ENST00000560521 TCP11L2Q8N4U5 519 aa13.32□□□□□ -0.28
RABGGTA-217ENST00000560521 ATP7BP35670 1465 aa13.31□□□□□ -0.28
RABGGTA-217ENST00000560521 RGPD5Q99666 1765 aa13.31□□□□□ -0.28
RABGGTA-217ENST00000560521 NUDT16Q96DE0 195 aaKnown RBP13.31□□□□□ -0.28
RABGGTA-217ENST00000560521 ZNF784Q8NCA9 323 aaPredicted RBP13.3□□□□□ -0.28
RABGGTA-217ENST00000560521 PDGFDQ9GZP0 370 aaPredicted RBP13.3□□□□□ -0.28
RABGGTA-217ENST00000560521 KAT6BQ8WYB5 2073 aa13.3□□□□□ -0.28
RABGGTA-217ENST00000560521 LRRC37A3O60309 1634 aa13.29□□□□□ -0.28
RABGGTA-217ENST00000560521 THRAP3Q9Y2W1 955 aaKnown RBP13.29□□□□□ -0.28
RABGGTA-217ENST00000560521 PLSCR1O15162 318 aa13.28□□□□□ -0.28
RABGGTA-217ENST00000560521 ANO8Q9HCE9 1232 aaPredicted RBP13.28□□□□□ -0.28
RABGGTA-217ENST00000560521 PTF1AQ7RTS3 328 aa13.27□□□□□ -0.29
RABGGTA-217ENST00000560521 PROM2Q8N271 834 aa13.27□□□□□ -0.29
RABGGTA-217ENST00000560521 ACEP12821 1306 aa13.27□□□□□ -0.29
RABGGTA-217ENST00000560521 POLR3AO14802 1390 aaPredicted RBP13.27□□□□□ -0.29
RABGGTA-217ENST00000560521 CPDO75976 1380 aa13.27□□□□□ -0.29
RABGGTA-217ENST00000560521 COL18A1P39060 1754 aa13.27□□□□□ -0.29
RABGGTA-217ENST00000560521 C11orf95C9JLR9 678 aaPredicted RBP13.26□□□□□ -0.29
RABGGTA-217ENST00000560521 COL5A2P05997 1499 aaPredicted RBP13.26□□□□□ -0.29
RABGGTA-217ENST00000560521 PTGER2P43116 358 aa13.26□□□□□ -0.29
RABGGTA-217ENST00000560521 OVOS2A0A0G2JMS6 1433 aa13.25□□□□□ -0.29
RABGGTA-217ENST00000560521 OVOS2A0A0J9YW53 1432 aa13.25□□□□□ -0.29
RABGGTA-217ENST00000560521 OVOS2Q6IE36 1432 aa13.25□□□□□ -0.29
RABGGTA-217ENST00000560521 ZBTB7AO95365 584 aa13.25□□□□□ -0.29
RABGGTA-217ENST00000560521 ABTB2Q8N961 1025 aa13.25□□□□□ -0.29
RABGGTA-217ENST00000560521 CDK19Q9BWU1 502 aa13.25□□□□□ -0.29
RABGGTA-217ENST00000560521 KDM2AQ9Y2K7 1162 aa13.25□□□□□ -0.29
RABGGTA-217ENST00000560521 USP19O94966 1318 aa13.24□□□□□ -0.29
RABGGTA-217ENST00000560521 ATF5Q9Y2D1 282 aaPredicted RBP13.24□□□□□ -0.29
RABGGTA-217ENST00000560521 CRB1P82279 1406 aa13.23□□□□□ -0.29
RABGGTA-217ENST00000560521 SENP3-EIF4A1A0A087X0R7 540 aa13.23□□□□□ -0.29
RABGGTA-217ENST00000560521 PLEKHG3A1L390 1219 aa13.23□□□□□ -0.29
RABGGTA-217ENST00000560521 GCP02774 474 aa13.23□□□□□ -0.29
RABGGTA-217ENST00000560521 SYT17Q9BSW7 474 aa13.23□□□□□ -0.29
RABGGTA-217ENST00000560521 BCL11BQ9C0K0 894 aaPredicted RBP13.23□□□□□ -0.29
RABGGTA-217ENST00000560521 C1QTNF8P60827 252 aa13.22□□□□□ -0.29
RABGGTA-217ENST00000560521 DCAF11Q8TEB1 546 aa13.22□□□□□ -0.29
RABGGTA-217ENST00000560521 CCDC61Q9Y6R9 512 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms