RNA–Protein interactions for RNA: ENST00000560222.1

IPO4-212, Transcript of importin 4, humanhuman

TSL 3

Gene IPO4, Length 573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-212ENST00000560222 NBPF14Q5TI25 921 aa24.18■■□□□ 1.46
IPO4-212ENST00000560222 STRN4Q9NRL3 753 aa24.18■■□□□ 1.46
IPO4-212ENST00000560222 IFT172Q9UG01 1749 aa24.18■■□□□ 1.46
IPO4-212ENST00000560222 SPATA31E1Q6ZUB1 1445 aa24.18■■□□□ 1.46
IPO4-212ENST00000560222 HIRIP3Q9BW71 556 aaPredicted RBP24.17■■□□□ 1.46
IPO4-212ENST00000560222 ABCA3Q99758 1704 aa24.17■■□□□ 1.46
IPO4-212ENST00000560222 DISP2A7MBM2 1401 aa24.17■■□□□ 1.46
IPO4-212ENST00000560222 USP35Q9P2H5 1018 aa24.16■■□□□ 1.46
IPO4-212ENST00000560222 NGDNQ8NEJ9 315 aaKnown RBP24.15■■□□□ 1.46
IPO4-212ENST00000560222 PDE3BQ13370 1112 aa24.14■■□□□ 1.45
IPO4-212ENST00000560222 NRAPQ86VF7 1730 aa24.14■■□□□ 1.45
IPO4-212ENST00000560222 COL14A1Q05707 1796 aaKnown RBP24.14■■□□□ 1.45
IPO4-212ENST00000560222 CHRNA2Q15822 529 aa24.13■■□□□ 1.45
IPO4-212ENST00000560222 SPATA31A1Q5TZJ5 1347 aa24.12■■□□□ 1.45
IPO4-212ENST00000560222 ACIN1Q9UKV3 1341 aaKnown RBP24.12■■□□□ 1.45
IPO4-212ENST00000560222 EVA1CP58658 441 aa24.12■■□□□ 1.45
IPO4-212ENST00000560222 MPHOSPH9Q99550 1183 aa24.12■■□□□ 1.45
IPO4-212ENST00000560222 ANKARQ7Z5J8 1434 aa24.11■■□□□ 1.45
IPO4-212ENST00000560222 SPON1Q9HCB6 807 aa24.11■■□□□ 1.45
IPO4-212ENST00000560222 MINK1Q8N4C8 1332 aaPredicted RBP24.1■■□□□ 1.45
IPO4-212ENST00000560222 PARD3Q8TEW0 1356 aa24.1■■□□□ 1.45
IPO4-212ENST00000560222 TRAK1Q9UPV9 953 aa24.09■■□□□ 1.45
IPO4-212ENST00000560222 ADGRB2O60241 1585 aa24.08■■□□□ 1.45
IPO4-212ENST00000560222 TNS1Q9HBL0 1735 aaKnown RBP24.08■■□□□ 1.45
IPO4-212ENST00000560222 ZC3H6P61129 1189 aaKnown RBP24.08■■□□□ 1.45
IPO4-212ENST00000560222 KIAA0232Q92628 1395 aa24.06■■□□□ 1.44
IPO4-212ENST00000560222 THSD7AQ9UPZ6 1657 aa24.05■■□□□ 1.44
IPO4-212ENST00000560222 KCNQ2O43526 872 aa24.05■■□□□ 1.44
IPO4-212ENST00000560222 NUTM2GQ5VZR2 741 aa24.05■■□□□ 1.44
IPO4-212ENST00000560222 PRR36Q9H6K5 1346 aa24.04■■□□□ 1.44
IPO4-212ENST00000560222 EIF3AQ14152 1382 aaKnown RBP24.03■■□□□ 1.44
IPO4-212ENST00000560222 TRPM3Q9HCF6 1732 aaPredicted RBP24.02■■□□□ 1.44
IPO4-212ENST00000560222 WASLO00401 505 aaPredicted RBP24.02■■□□□ 1.44
IPO4-212ENST00000560222 ALS2Q96Q42 1657 aa24■■□□□ 1.43
IPO4-212ENST00000560222 BARGINQ6ZT62 677 aa23.99■■□□□ 1.43
IPO4-212ENST00000560222 TCP11L2Q8N4U5 519 aa23.98■■□□□ 1.43
IPO4-212ENST00000560222 LARP1Q6PKG0 1096 aaKnown RBP23.97■■□□□ 1.43
IPO4-212ENST00000560222 NINLQ9Y2I6 1382 aa23.97■■□□□ 1.43
IPO4-212ENST00000560222 DLC1Q96QB1 1528 aa23.95■■□□□ 1.43
IPO4-212ENST00000560222 KDM2AQ9Y2K7 1162 aa23.95■■□□□ 1.42
IPO4-212ENST00000560222 NUDT16Q96DE0 195 aaKnown RBP23.94■■□□□ 1.42
IPO4-212ENST00000560222 TULP4Q9NRJ4 1543 aa23.93■■□□□ 1.42
IPO4-212ENST00000560222 SSH2Q76I76 1423 aa23.92■■□□□ 1.42
IPO4-212ENST00000560222 NUP188Q5SRE5 1749 aa23.9■■□□□ 1.42
IPO4-212ENST00000560222 ABTB2Q8N961 1025 aa23.9■■□□□ 1.42
IPO4-212ENST00000560222 RREB1Q92766 1687 aa23.89■■□□□ 1.42
IPO4-212ENST00000560222 ZBTB7CA1YPR0 619 aa23.89■■□□□ 1.41
IPO4-212ENST00000560222 C11orf95C9JLR9 678 aaPredicted RBP23.88■■□□□ 1.41
IPO4-212ENST00000560222 ZNF784Q8NCA9 323 aaPredicted RBP23.88■■□□□ 1.41
IPO4-212ENST00000560222 BCL11BQ9C0K0 894 aaPredicted RBP23.88■■□□□ 1.41
IPO4-212ENST00000560222 ZBTB7AO95365 584 aa23.87■■□□□ 1.41
IPO4-212ENST00000560222 THRAP3Q9Y2W1 955 aaKnown RBP23.87■■□□□ 1.41
IPO4-212ENST00000560222 CRYBG1Q9Y4K1 1723 aa23.87■■□□□ 1.41
IPO4-212ENST00000560222 SENP3-EIF4A1A0A087X0R7 540 aa23.86■■□□□ 1.41
IPO4-212ENST00000560222 DCAF11Q8TEB1 546 aa23.85■■□□□ 1.41
IPO4-212ENST00000560222 CDK19Q9BWU1 502 aa23.85■■□□□ 1.41
IPO4-212ENST00000560222 ATF5Q9Y2D1 282 aaPredicted RBP23.85■■□□□ 1.41
IPO4-212ENST00000560222 ACEP12821 1306 aa23.84■■□□□ 1.41
IPO4-212ENST00000560222 CAMTA1Q9Y6Y1 1673 aa23.83■■□□□ 1.41
IPO4-212ENST00000560222 PDGFDQ9GZP0 370 aaPredicted RBP23.83■■□□□ 1.41
IPO4-212ENST00000560222 ADGRB1O14514 1584 aa23.82■■□□□ 1.4
IPO4-212ENST00000560222 ATP7BP35670 1465 aa23.82■■□□□ 1.4
IPO4-212ENST00000560222 PLSCR1O15162 318 aa23.82■■□□□ 1.4
IPO4-212ENST00000560222 ANO8Q9HCE9 1232 aaPredicted RBP23.82■■□□□ 1.4
IPO4-212ENST00000560222 PHRF1Q9P1Y6 1649 aaKnown RBP23.81■■□□□ 1.4
IPO4-212ENST00000560222 DDB1Q16531 1140 aa23.8■■□□□ 1.4
IPO4-212ENST00000560222 NLRP13Q86W25 1043 aa23.8■■□□□ 1.4
IPO4-212ENST00000560222 CCDC61Q9Y6R9 512 aa23.8■■□□□ 1.4
IPO4-212ENST00000560222 GCP02774 474 aa23.79■■□□□ 1.4
IPO4-212ENST00000560222 OVOS2A0A0G2JMS6 1433 aa23.78■■□□□ 1.4
IPO4-212ENST00000560222 OVOS2A0A0J9YW53 1432 aa23.78■■□□□ 1.4
IPO4-212ENST00000560222 OVOS2Q6IE36 1432 aa23.78■■□□□ 1.4
IPO4-212ENST00000560222 PTF1AQ7RTS3 328 aa23.78■■□□□ 1.4
IPO4-212ENST00000560222 CPDO75976 1380 aa23.78■■□□□ 1.4
IPO4-212ENST00000560222 STK32BQ9NY57 414 aa23.77■■□□□ 1.4
IPO4-212ENST00000560222 TOM1L2Q6ZVM7 507 aa23.76■■□□□ 1.39
IPO4-212ENST00000560222 FHDC1Q9C0D6 1143 aaPredicted RBP23.76■■□□□ 1.39
IPO4-212ENST00000560222 PTGER2P43116 358 aa23.75■■□□□ 1.39
IPO4-212ENST00000560222 SYT17Q9BSW7 474 aa23.75■■□□□ 1.39
IPO4-212ENST00000560222 ITSN1Q15811 1721 aa23.75■■□□□ 1.39
IPO4-212ENST00000560222 PLEKHG3A1L390 1219 aa23.74■■□□□ 1.39
IPO4-212ENST00000560222 C1QTNF8P60827 252 aa23.74■■□□□ 1.39
IPO4-212ENST00000560222 PROM2Q8N271 834 aa23.74■■□□□ 1.39
IPO4-212ENST00000560222 POLR3AO14802 1390 aaPredicted RBP23.74■■□□□ 1.39
IPO4-212ENST00000560222 NRKQ7Z2Y5 1582 aa23.74■■□□□ 1.39
IPO4-212ENST00000560222 CRB1P82279 1406 aa23.73■■□□□ 1.39
IPO4-212ENST00000560222 USP19O94966 1318 aa23.72■■□□□ 1.39
IPO4-212ENST00000560222 COL5A2P05997 1499 aaPredicted RBP23.71■■□□□ 1.39
IPO4-212ENST00000560222 SRPK2P78362 688 aaKnown RBP23.7■■□□□ 1.38
IPO4-212ENST00000560222 NLRP6P59044 892 aa23.69■■□□□ 1.38
IPO4-212ENST00000560222 TXNRD1Q16881 649 aa23.69■■□□□ 1.38
IPO4-212ENST00000560222 MARCH10Q8NA82 808 aaPredicted RBP23.69■■□□□ 1.38
IPO4-212ENST00000560222 STAC3Q96MF2 364 aa23.69■■□□□ 1.38
IPO4-212ENST00000560222 PARP4Q9UKK3 1724 aaKnown RBP23.69■■□□□ 1.38
IPO4-212ENST00000560222 SLC15A2Q16348 729 aa23.68■■□□□ 1.38
IPO4-212ENST00000560222 LMO7Q8WWI1 1683 aa23.67■■□□□ 1.38
IPO4-212ENST00000560222 MTFR1LQ9H019 292 aa23.67■■□□□ 1.38
IPO4-212ENST00000560222 MYOM1P52179 1685 aa23.66■■□□□ 1.38
IPO4-212ENST00000560222 CASZ1Q86V15 1759 aa23.65■■□□□ 1.38
IPO4-212ENST00000560222 CSB-PGBD3P0DP91 1061 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms