RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 NRXN1Q9ULB1 1477 aa10.23□□□□□ -0.77
LRRC28-207ENST00000558500 FMN2Q9NZ56 1722 aa10.22□□□□□ -0.77
LRRC28-207ENST00000558500 DSG3P32926 999 aa10.22□□□□□ -0.77
LRRC28-207ENST00000558500 PARD3Q8TEW0 1356 aa10.22□□□□□ -0.77
LRRC28-207ENST00000558500 YTHDC2Q9H6S0 1430 aaKnown RBP10.22□□□□□ -0.77
LRRC28-207ENST00000558500 TRIM37O94972 964 aa10.21□□□□□ -0.77
LRRC28-207ENST00000558500 FAM196AQ6ZSG2 479 aa10.21□□□□□ -0.77
LRRC28-207ENST00000558500 ATF5Q9Y2D1 282 aaPredicted RBP10.21□□□□□ -0.77
LRRC28-207ENST00000558500 ANKRD30BQ9BXX2 1392 aa10.21□□□□□ -0.78
LRRC28-207ENST00000558500 RGPD1P0DJD0 1748 aa10.21□□□□□ -0.78
LRRC28-207ENST00000558500 PPLO60437 1756 aa10.2□□□□□ -0.78
LRRC28-207ENST00000558500 APBA3O96018 575 aa10.2□□□□□ -0.78
LRRC28-207ENST00000558500 RGL3Q3MIN7 710 aa10.2□□□□□ -0.78
LRRC28-207ENST00000558500 PMFBP1Q8TBY8 1022 aa10.2□□□□□ -0.78
LRRC28-207ENST00000558500 PIK3C2GO75747 1445 aa10.19□□□□□ -0.78
LRRC28-207ENST00000558500 NRAPQ86VF7 1730 aa10.19□□□□□ -0.78
LRRC28-207ENST00000558500 ADGRB2O60241 1585 aa10.18□□□□□ -0.78
LRRC28-207ENST00000558500 SPATA31E1Q6ZUB1 1445 aa10.18□□□□□ -0.78
LRRC28-207ENST00000558500 SPATA31A1Q5TZJ5 1347 aa10.18□□□□□ -0.78
LRRC28-207ENST00000558500 NBPF8Q3BBV2 869 aa10.18□□□□□ -0.78
LRRC28-207ENST00000558500 NBPF14Q5TI25 921 aa10.18□□□□□ -0.78
LRRC28-207ENST00000558500 SPON1Q9HCB6 807 aa10.18□□□□□ -0.78
LRRC28-207ENST00000558500 PPP1R1BQ9UD71 204 aaPredicted RBP10.18□□□□□ -0.78
LRRC28-207ENST00000558500 ABCA3Q99758 1704 aa10.18□□□□□ -0.78
LRRC28-207ENST00000558500 THSD7AQ9UPZ6 1657 aa10.18□□□□□ -0.78
LRRC28-207ENST00000558500 ANKARQ7Z5J8 1434 aa10.17□□□□□ -0.78
LRRC28-207ENST00000558500 NINLQ9Y2I6 1382 aa10.17□□□□□ -0.78
LRRC28-207ENST00000558500 KNDC1Q76NI1 1749 aa10.17□□□□□ -0.78
LRRC28-207ENST00000558500 TNS1Q9HBL0 1735 aaKnown RBP10.17□□□□□ -0.78
LRRC28-207ENST00000558500 KCNQ2O43526 872 aa10.17□□□□□ -0.78
LRRC28-207ENST00000558500 PRDM11Q9NQV5 511 aa10.17□□□□□ -0.78
LRRC28-207ENST00000558500 COL14A1Q05707 1796 aaKnown RBP10.16□□□□□ -0.78
LRRC28-207ENST00000558500 GPRASP1Q5JY77 1395 aa10.16□□□□□ -0.78
LRRC28-207ENST00000558500 SAFB2Q14151 953 aaKnown RBP eCLIP10.16□□□□□ -0.78
LRRC28-207ENST00000558500 PRAM1Q96QH2 718 aa10.16□□□□□ -0.78
LRRC28-207ENST00000558500 C14orf93Q9H972 538 aaKnown RBP10.16□□□□□ -0.78
LRRC28-207ENST00000558500 DHX57Q6P158 1386 aaKnown RBP10.15□□□□□ -0.78
LRRC28-207ENST00000558500 ACIN1Q9UKV3 1341 aaKnown RBP10.15□□□□□ -0.78
LRRC28-207ENST00000558500 ABCB7O75027 752 aa10.15□□□□□ -0.78
LRRC28-207ENST00000558500 PDE3BQ13370 1112 aa10.14□□□□□ -0.79
LRRC28-207ENST00000558500 PPARGC1BQ86YN6 1023 aaKnown RBP10.14□□□□□ -0.79
LRRC28-207ENST00000558500 STRN4Q9NRL3 753 aa10.14□□□□□ -0.79
LRRC28-207ENST00000558500 CHRNA2Q15822 529 aa10.13□□□□□ -0.79
LRRC28-207ENST00000558500 CFAP70Q5T0N1 1121 aa10.13□□□□□ -0.79
LRRC28-207ENST00000558500 BARGINQ6ZT62 677 aa10.13□□□□□ -0.79
LRRC28-207ENST00000558500 ZNF784Q8NCA9 323 aaPredicted RBP10.13□□□□□ -0.79
LRRC28-207ENST00000558500 POGKQ9P215 609 aa10.13□□□□□ -0.79
LRRC28-207ENST00000558500 KIAA0232Q92628 1395 aa10.13□□□□□ -0.79
LRRC28-207ENST00000558500 PRR36Q9H6K5 1346 aa10.12□□□□□ -0.79
LRRC28-207ENST00000558500 PAK3O75914 559 aaPredicted RBP10.12□□□□□ -0.79
LRRC28-207ENST00000558500 USP35Q9P2H5 1018 aa10.12□□□□□ -0.79
LRRC28-207ENST00000558500 IFT172Q9UG01 1749 aa10.12□□□□□ -0.79
LRRC28-207ENST00000558500 TRPM3Q9HCF6 1732 aaPredicted RBP10.11□□□□□ -0.79
LRRC28-207ENST00000558500 SENP3-EIF4A1A0A087X0R7 540 aa10.11□□□□□ -0.79
LRRC28-207ENST00000558500 NGDNQ8NEJ9 315 aaKnown RBP10.11□□□□□ -0.79
LRRC28-207ENST00000558500 HIRIP3Q9BW71 556 aaPredicted RBP10.11□□□□□ -0.79
LRRC28-207ENST00000558500 RREB1Q92766 1687 aa10.11□□□□□ -0.79
LRRC28-207ENST00000558500 ALS2Q96Q42 1657 aa10.11□□□□□ -0.79
LRRC28-207ENST00000558500 EIF3AQ14152 1382 aaKnown RBP10.11□□□□□ -0.79
LRRC28-207ENST00000558500 ZC3H6P61129 1189 aaKnown RBP10.1□□□□□ -0.79
LRRC28-207ENST00000558500 DLC1Q96QB1 1528 aa10.1□□□□□ -0.79
LRRC28-207ENST00000558500 NUP188Q5SRE5 1749 aa10.1□□□□□ -0.79
LRRC28-207ENST00000558500 SSH2Q76I76 1423 aa10.09□□□□□ -0.79
LRRC28-207ENST00000558500 RGPD8O14715 1765 aaPredicted RBP10.09□□□□□ -0.79
LRRC28-207ENST00000558500 WASLO00401 505 aaPredicted RBP10.09□□□□□ -0.79
LRRC28-207ENST00000558500 EVA1CP58658 441 aa10.09□□□□□ -0.79
LRRC28-207ENST00000558500 IFFO2Q5TF58 517 aa10.09□□□□□ -0.79
LRRC28-207ENST00000558500 TCP11L2Q8N4U5 519 aa10.09□□□□□ -0.79
LRRC28-207ENST00000558500 MINK1Q8N4C8 1332 aaPredicted RBP10.08□□□□□ -0.8
LRRC28-207ENST00000558500 C11orf95C9JLR9 678 aaPredicted RBP10.08□□□□□ -0.8
LRRC28-207ENST00000558500 C1QTNF8P60827 252 aa10.08□□□□□ -0.8
LRRC28-207ENST00000558500 POLA2Q14181 598 aa10.08□□□□□ -0.8
LRRC28-207ENST00000558500 LARP1Q6PKG0 1096 aaKnown RBP10.08□□□□□ -0.8
LRRC28-207ENST00000558500 ANO8Q9HCE9 1232 aaPredicted RBP10.08□□□□□ -0.8
LRRC28-207ENST00000558500 TULP4Q9NRJ4 1543 aa10.07□□□□□ -0.8
LRRC28-207ENST00000558500 PLSCR1O15162 318 aa10.07□□□□□ -0.8
LRRC28-207ENST00000558500 PTGER2P43116 358 aa10.07□□□□□ -0.8
LRRC28-207ENST00000558500 MPHOSPH9Q99550 1183 aa10.07□□□□□ -0.8
LRRC28-207ENST00000558500 TRAK1Q9UPV9 953 aa10.07□□□□□ -0.8
LRRC28-207ENST00000558500 THRAP3Q9Y2W1 955 aaKnown RBP10.07□□□□□ -0.8
LRRC28-207ENST00000558500 CRYBG1Q9Y4K1 1723 aa10.07□□□□□ -0.8
LRRC28-207ENST00000558500 ZBTB7AO95365 584 aa10.06□□□□□ -0.8
LRRC28-207ENST00000558500 AMER1Q5JTC6 1135 aaPredicted RBP10.06□□□□□ -0.8
LRRC28-207ENST00000558500 NUTM2GQ5VZR2 741 aa10.06□□□□□ -0.8
LRRC28-207ENST00000558500 PDGFDQ9GZP0 370 aaPredicted RBP10.06□□□□□ -0.8
LRRC28-207ENST00000558500 CAMTA1Q9Y6Y1 1673 aa10.06□□□□□ -0.8
LRRC28-207ENST00000558500 RTN4Q9NQC3 1192 aaKnown RBP10.05□□□□□ -0.8
LRRC28-207ENST00000558500 OVOS2A0A0G2JMS6 1433 aa10.05□□□□□ -0.8
LRRC28-207ENST00000558500 OVOS2A0A0J9YW53 1432 aa10.05□□□□□ -0.8
LRRC28-207ENST00000558500 OVOS2Q6IE36 1432 aa10.05□□□□□ -0.8
LRRC28-207ENST00000558500 ADGRB1O14514 1584 aa10.05□□□□□ -0.8
LRRC28-207ENST00000558500 NRKQ7Z2Y5 1582 aa10.05□□□□□ -0.8
LRRC28-207ENST00000558500 ATP7BP35670 1465 aa10.04□□□□□ -0.8
LRRC28-207ENST00000558500 CPDO75976 1380 aa10.04□□□□□ -0.8
LRRC28-207ENST00000558500 NUDT16Q96DE0 195 aaKnown RBP10.04□□□□□ -0.8
LRRC28-207ENST00000558500 SYT17Q9BSW7 474 aa10.04□□□□□ -0.8
LRRC28-207ENST00000558500 BCL11BQ9C0K0 894 aaPredicted RBP10.04□□□□□ -0.8
LRRC28-207ENST00000558500 PROM2Q8N271 834 aa10.03□□□□□ -0.8
LRRC28-207ENST00000558500 FHDC1Q9C0D6 1143 aaPredicted RBP10.03□□□□□ -0.8
LRRC28-207ENST00000558500 PTF1AQ7RTS3 328 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms