RNA–Protein interactions for RNA: ENST00000557890.1

CYFIP1-201, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 2

Gene CYFIP1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-201ENST00000557890 PRR20CP86479 221 aa8.4□□□□□ -1.06
CYFIP1-201ENST00000557890 PRR20DP86480 221 aa8.4□□□□□ -1.06
CYFIP1-201ENST00000557890 PRR20BP86481 221 aa8.4□□□□□ -1.06
CYFIP1-201ENST00000557890 PRR20AP86496 221 aa8.4□□□□□ -1.06
CYFIP1-201ENST00000557890 CSPP1Q1MSJ5 1256 aa8.4□□□□□ -1.06
CYFIP1-201ENST00000557890 CABLES1Q8TDN4 633 aa8.4□□□□□ -1.06
CYFIP1-201ENST00000557890 NUDT12Q9BQG2 462 aa8.4□□□□□ -1.06
CYFIP1-201ENST00000557890 PLEKHG3A1L390 1219 aa8.39□□□□□ -1.07
CYFIP1-201ENST00000557890 GDF9O60383 454 aa8.39□□□□□ -1.07
CYFIP1-201ENST00000557890 PTPRNQ16849 979 aa8.39□□□□□ -1.07
CYFIP1-201ENST00000557890 POLR3EQ9NVU0 708 aa8.39□□□□□ -1.07
CYFIP1-201ENST00000557890 UNC13AQ9UPW8 1703 aa8.38□□□□□ -1.07
CYFIP1-201ENST00000557890 CFAP99D6REC4 459 aa8.38□□□□□ -1.07
CYFIP1-201ENST00000557890 CCNYL3P0C7X3 344 aa8.38□□□□□ -1.07
CYFIP1-201ENST00000557890 TRIM32Q13049 653 aa8.38□□□□□ -1.07
CYFIP1-201ENST00000557890 SKIV2LQ15477 1246 aaKnown RBP8.38□□□□□ -1.07
CYFIP1-201ENST00000557890 NEUROD2Q15784 382 aa8.38□□□□□ -1.07
CYFIP1-201ENST00000557890 QPCTQ16769 361 aa8.38□□□□□ -1.07
CYFIP1-201ENST00000557890 SH3D19Q5HYK7 790 aa8.38□□□□□ -1.07
CYFIP1-201ENST00000557890 TOP2BQ02880 1626 aa8.37□□□□□ -1.07
CYFIP1-201ENST00000557890 NUTM2BA6NNL0 878 aaPredicted RBP8.37□□□□□ -1.07
CYFIP1-201ENST00000557890 NUTM2EB1AL46 878 aaPredicted RBP8.37□□□□□ -1.07
CYFIP1-201ENST00000557890 NUTM2DQ5VT03 806 aaPredicted RBP8.37□□□□□ -1.07
CYFIP1-201ENST00000557890 NUTM2AQ8IVF1 878 aaPredicted RBP8.37□□□□□ -1.07
CYFIP1-201ENST00000557890 EVA1BQ9NVM1 165 aa8.37□□□□□ -1.07
CYFIP1-201ENST00000557890 PKD2L1Q9P0L9 805 aa8.37□□□□□ -1.07
CYFIP1-201ENST00000557890 TIMELESSQ9UNS1 1208 aa8.37□□□□□ -1.07
CYFIP1-201ENST00000557890 BRPF1P55201 1214 aaPredicted RBP8.36□□□□□ -1.07
CYFIP1-201ENST00000557890 PTCRAQ6ISU1 281 aaPredicted RBP8.36□□□□□ -1.07
CYFIP1-201ENST00000557890 LYPD8Q6UX82 237 aa8.36□□□□□ -1.07
CYFIP1-201ENST00000557890 Q6ZNB5 142 aa8.36□□□□□ -1.07
CYFIP1-201ENST00000557890 BIVM-ERCC5R4GMW8 1640 aa8.36□□□□□ -1.07
CYFIP1-201ENST00000557890 TNFRSF10AO00220 468 aa8.35□□□□□ -1.07
CYFIP1-201ENST00000557890 FOXC1Q12948 553 aa8.35□□□□□ -1.07
CYFIP1-201ENST00000557890 RTL5Q5HYW3 569 aaPredicted RBP8.35□□□□□ -1.07
CYFIP1-201ENST00000557890 MAP3K1Q13233 1512 aa8.34□□□□□ -1.07
CYFIP1-201ENST00000557890 CUX2O14529 1486 aa8.34□□□□□ -1.07
CYFIP1-201ENST00000557890 KCNH2Q12809 1159 aa8.34□□□□□ -1.07
CYFIP1-201ENST00000557890 WNT7AO00755 349 aa8.33□□□□□ -1.08
CYFIP1-201ENST00000557890 PROCA1Q8NCQ7 364 aaPredicted RBP8.33□□□□□ -1.08
CYFIP1-201ENST00000557890 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.33□□□□□ -1.08
CYFIP1-201ENST00000557890 WNT7BP56706 349 aa8.32□□□□□ -1.08
CYFIP1-201ENST00000557890 SYNJ1O43426 1573 aa8.31□□□□□ -1.08
CYFIP1-201ENST00000557890 RRBP1Q9P2E9 1410 aaKnown RBP8.31□□□□□ -1.08
CYFIP1-201ENST00000557890 PER1O15534 1290 aaPredicted RBP8.31□□□□□ -1.08
CYFIP1-201ENST00000557890 SKOR1P84550 965 aa8.31□□□□□ -1.08
CYFIP1-201ENST00000557890 TSC1Q92574 1164 aa8.31□□□□□ -1.08
CYFIP1-201ENST00000557890 UNC93B1Q9H1C4 597 aa8.31□□□□□ -1.08
CYFIP1-201ENST00000557890 GOPCQ9HD26 462 aa8.31□□□□□ -1.08
CYFIP1-201ENST00000557890 ATAD2BQ9ULI0 1458 aa8.31□□□□□ -1.08
CYFIP1-201ENST00000557890 KIF27Q86VH2 1401 aa8.3□□□□□ -1.08
CYFIP1-201ENST00000557890 HMGXB3Q12766 1538 aa8.3□□□□□ -1.08
CYFIP1-201ENST00000557890 DGAT1O75907 488 aa8.3□□□□□ -1.08
CYFIP1-201ENST00000557890 F12P00748 615 aaPredicted RBP8.3□□□□□ -1.08
CYFIP1-201ENST00000557890 NEFLP07196 543 aa8.3□□□□□ -1.08
CYFIP1-201ENST00000557890 PPP2R2DQ66LE6 453 aa8.3□□□□□ -1.08
CYFIP1-201ENST00000557890 TRAF7Q6Q0C0 670 aa8.3□□□□□ -1.08
CYFIP1-201ENST00000557890 IL27Q8NEV9 243 aa8.3□□□□□ -1.08
CYFIP1-201ENST00000557890 HELBQ8NG08 1087 aaPredicted RBP8.3□□□□□ -1.08
CYFIP1-201ENST00000557890 TOR4AQ9NXH8 423 aa8.3□□□□□ -1.08
CYFIP1-201ENST00000557890 LCE2BO14633 110 aa8.29□□□□□ -1.08
CYFIP1-201ENST00000557890 CTHP32929 405 aa8.29□□□□□ -1.08
CYFIP1-201ENST00000557890 RC3H1Q5TC82 1133 aaKnown RBP8.29□□□□□ -1.08
CYFIP1-201ENST00000557890 FBXO31Q5XUX0 539 aaPredicted RBP8.29□□□□□ -1.08
CYFIP1-201ENST00000557890 CYP4X1Q8N118 509 aa8.29□□□□□ -1.08
CYFIP1-201ENST00000557890 PRXQ9BXM0 1461 aa8.29□□□□□ -1.08
CYFIP1-201ENST00000557890 BAP1Q92560 729 aa8.28□□□□□ -1.08
CYFIP1-201ENST00000557890 MRGPRX2Q96LB1 330 aa8.28□□□□□ -1.08
CYFIP1-201ENST00000557890 MAP10Q9P2G4 905 aa8.28□□□□□ -1.08
CYFIP1-201ENST00000557890 ATP1B4Q9UN42 357 aaPredicted RBP8.28□□□□□ -1.08
CYFIP1-201ENST00000557890 FAM187AA6NFU0 413 aa8.27□□□□□ -1.09
CYFIP1-201ENST00000557890 SH3BP2P78314 561 aa8.27□□□□□ -1.09
CYFIP1-201ENST00000557890 PKDCCQ504Y2 493 aa8.27□□□□□ -1.09
CYFIP1-201ENST00000557890 YTHDC1Q96MU7 727 aaKnown RBP8.27□□□□□ -1.09
CYFIP1-201ENST00000557890 FHAD1B1AJZ9 1412 aa8.27□□□□□ -1.09
CYFIP1-201ENST00000557890 CTDSPL2Q05D32 466 aa8.26□□□□□ -1.09
CYFIP1-201ENST00000557890 SNIP1Q8TAD8 396 aaKnown RBP8.26□□□□□ -1.09
CYFIP1-201ENST00000557890 PCMTD1Q96MG8 357 aaPredicted RBP8.26□□□□□ -1.09
CYFIP1-201ENST00000557890 BICRAQ9NZM4 1560 aa8.26□□□□□ -1.09
CYFIP1-201ENST00000557890 RAPGEF2Q9Y4G8 1499 aa8.26□□□□□ -1.09
CYFIP1-201ENST00000557890 DHX57Q6P158 1386 aaKnown RBP8.25□□□□□ -1.09
CYFIP1-201ENST00000557890 CCNB3Q8WWL7 1395 aa8.25□□□□□ -1.09
CYFIP1-201ENST00000557890 RUSC2Q8N2Y8 1516 aa8.25□□□□□ -1.09
CYFIP1-201ENST00000557890 TTC24A2A3L6 582 aaPredicted RBP8.25□□□□□ -1.09
CYFIP1-201ENST00000557890 LINC01559Q495D7 138 aa8.25□□□□□ -1.09
CYFIP1-201ENST00000557890 ZNF511Q8NB15 262 aa8.25□□□□□ -1.09
CYFIP1-201ENST00000557890 EHBP1Q8NDI1 1231 aa8.24□□□□□ -1.09
CYFIP1-201ENST00000557890 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.23□□□□□ -1.09
CYFIP1-201ENST00000557890 PRDM2Q13029 1718 aa8.23□□□□□ -1.09
CYFIP1-201ENST00000557890 SIAH2O43255 324 aa8.23□□□□□ -1.09
CYFIP1-201ENST00000557890 AVPP01185 164 aa8.22□□□□□ -1.09
CYFIP1-201ENST00000557890 SMPD1P17405 629 aa8.22□□□□□ -1.09
CYFIP1-201ENST00000557890 RFC5P40937 340 aa8.22□□□□□ -1.09
CYFIP1-201ENST00000557890 ARMC2Q8NEN0 867 aa8.22□□□□□ -1.09
CYFIP1-201ENST00000557890 CCER2I3L3R5 266 aa8.21□□□□□ -1.1
CYFIP1-201ENST00000557890 J3QL48 77 aa8.21□□□□□ -1.1
CYFIP1-201ENST00000557890 AP1G2O75843 785 aa8.21□□□□□ -1.1
CYFIP1-201ENST00000557890 VARSP26640 1264 aaKnown RBP8.21□□□□□ -1.1
CYFIP1-201ENST00000557890 LRRN4Q8WUT4 740 aa8.21□□□□□ -1.1
CYFIP1-201ENST00000557890 NCAPD3P42695 1498 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms