RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 ZDHHC16Q969W1 377 aa9.22□□□□□ -0.93
FOXN3-215ENST00000557261 CDCA7LQ96GN5 454 aa9.22□□□□□ -0.93
FOXN3-215ENST00000557261 MAP3K1Q13233 1512 aa9.21□□□□□ -0.93
FOXN3-215ENST00000557261 KIAA0586Q9BVV6 1533 aa9.21□□□□□ -0.93
FOXN3-215ENST00000557261 BRD1O95696 1058 aa9.21□□□□□ -0.94
FOXN3-215ENST00000557261 VAC14Q08AM6 782 aa9.21□□□□□ -0.94
FOXN3-215ENST00000557261 CYB5RLQ6IPT4 315 aa9.21□□□□□ -0.94
FOXN3-215ENST00000557261 NUTM1Q86Y26 1132 aa9.21□□□□□ -0.94
FOXN3-215ENST00000557261 CEP170Q5SW79 1584 aa9.2□□□□□ -0.94
FOXN3-215ENST00000557261 CHD1O14646 1710 aa9.2□□□□□ -0.94
FOXN3-215ENST00000557261 NUTM2BA6NNL0 878 aaPredicted RBP9.2□□□□□ -0.94
FOXN3-215ENST00000557261 NUTM2EB1AL46 878 aaPredicted RBP9.2□□□□□ -0.94
FOXN3-215ENST00000557261 KCNA1Q09470 495 aa9.2□□□□□ -0.94
FOXN3-215ENST00000557261 NUTM2DQ5VT03 806 aaPredicted RBP9.2□□□□□ -0.94
FOXN3-215ENST00000557261 NUTM2AQ8IVF1 878 aaPredicted RBP9.2□□□□□ -0.94
FOXN3-215ENST00000557261 KCTD12Q96CX2 325 aaKnown RBP9.2□□□□□ -0.94
FOXN3-215ENST00000557261 STAC3Q96MF2 364 aa9.2□□□□□ -0.94
FOXN3-215ENST00000557261 EYA1Q99502 592 aa9.2□□□□□ -0.94
FOXN3-215ENST00000557261 TRIM34Q9BYJ4 488 aa9.2□□□□□ -0.94
FOXN3-215ENST00000557261 HCSTQ9UBK5 93 aa9.2□□□□□ -0.94
FOXN3-215ENST00000557261 IVNS1ABPQ9Y6Y0 642 aa9.2□□□□□ -0.94
FOXN3-215ENST00000557261 CFAP43Q8NDM7 1665 aa9.2□□□□□ -0.94
FOXN3-215ENST00000557261 COL9A1P20849 921 aa9.19□□□□□ -0.94
FOXN3-215ENST00000557261 CERKQ8TCT0 537 aa9.19□□□□□ -0.94
FOXN3-215ENST00000557261 PPP1R12CQ9BZL4 782 aa9.19□□□□□ -0.94
FOXN3-215ENST00000557261 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.18□□□□□ -0.94
FOXN3-215ENST00000557261 CSB-PGBD3P0DP91 1061 aa9.18□□□□□ -0.94
FOXN3-215ENST00000557261 CTDSPL2Q05D32 466 aa9.18□□□□□ -0.94
FOXN3-215ENST00000557261 HLA-CQ95604 372 aa9.18□□□□□ -0.94
FOXN3-215ENST00000557261 UCN2Q96RP3 112 aa9.18□□□□□ -0.94
FOXN3-215ENST00000557261 FYCO1Q9BQS8 1478 aa9.18□□□□□ -0.94
FOXN3-215ENST00000557261 ZBED2Q9BTP6 218 aa9.18□□□□□ -0.94
FOXN3-215ENST00000557261 KIAA0556O60303 1618 aa9.17□□□□□ -0.94
FOXN3-215ENST00000557261 FMN1Q68DA7 1419 aa9.17□□□□□ -0.94
FOXN3-215ENST00000557261 PALM3A6NDB9 673 aaPredicted RBP9.17□□□□□ -0.94
FOXN3-215ENST00000557261 SOCS7O14512 581 aa9.17□□□□□ -0.94
FOXN3-215ENST00000557261 GUCA2AQ02747 115 aa9.17□□□□□ -0.94
FOXN3-215ENST00000557261 EPS8L1Q8TE68 723 aa9.17□□□□□ -0.94
FOXN3-215ENST00000557261 SLC4A5Q9BY07 1137 aa9.17□□□□□ -0.94
FOXN3-215ENST00000557261 RBM27Q9P2N5 1060 aaKnown RBP9.17□□□□□ -0.94
FOXN3-215ENST00000557261 USTQ9Y2C2 406 aa9.17□□□□□ -0.94
FOXN3-215ENST00000557261 NDUFB9Q9Y6M9 179 aa9.17□□□□□ -0.94
FOXN3-215ENST00000557261 SHROOM2Q13796 1616 aa9.16□□□□□ -0.94
FOXN3-215ENST00000557261 LMOD1P29536 600 aaPredicted RBP9.16□□□□□ -0.94
FOXN3-215ENST00000557261 PRM3Q9NNZ6 103 aa9.16□□□□□ -0.94
FOXN3-215ENST00000557261 TSKSQ9UJT2 592 aa9.16□□□□□ -0.94
FOXN3-215ENST00000557261 PCDHGC3Q9UN70 934 aa9.16□□□□□ -0.94
FOXN3-215ENST00000557261 PCF11O94913 1555 aaKnown RBP9.16□□□□□ -0.94
FOXN3-215ENST00000557261 E9PSI1 815 aa9.15□□□□□ -0.94
FOXN3-215ENST00000557261 LRRN4Q8WUT4 740 aa9.15□□□□□ -0.94
FOXN3-215ENST00000557261 TFIP11Q9UBB9 837 aaKnown RBP9.15□□□□□ -0.94
FOXN3-215ENST00000557261 TMEM88BA6NKF7 163 aa9.14□□□□□ -0.95
FOXN3-215ENST00000557261 PPP1R3GB7ZBB8 358 aa9.14□□□□□ -0.95
FOXN3-215ENST00000557261 PDE4CQ08493 712 aa9.14□□□□□ -0.95
FOXN3-215ENST00000557261 NUDT18Q6ZVK8 323 aa9.14□□□□□ -0.95
FOXN3-215ENST00000557261 ALG2Q9H553 416 aa9.14□□□□□ -0.95
FOXN3-215ENST00000557261 PLA2G2EQ9NZK7 142 aa9.14□□□□□ -0.95
FOXN3-215ENST00000557261 CASKIN1Q8WXD9 1431 aa9.14□□□□□ -0.95
FOXN3-215ENST00000557261 TIAM1Q13009 1591 aa9.13□□□□□ -0.95
FOXN3-215ENST00000557261 PRR7Q8TB68 274 aa9.13□□□□□ -0.95
FOXN3-215ENST00000557261 HECW1Q76N89 1606 aa9.13□□□□□ -0.95
FOXN3-215ENST00000557261 CLASP1Q7Z460 1538 aa9.12□□□□□ -0.95
FOXN3-215ENST00000557261 DISP1Q96F81 1524 aa9.12□□□□□ -0.95
FOXN3-215ENST00000557261 BHMG1C9JSJ3 638 aaPredicted RBP9.12□□□□□ -0.95
FOXN3-215ENST00000557261 CCDC27Q2M243 656 aa9.12□□□□□ -0.95
FOXN3-215ENST00000557261 VRTNQ9H8Y1 702 aa9.12□□□□□ -0.95
FOXN3-215ENST00000557261 UNCXA6NJT0 531 aa9.11□□□□□ -0.95
FOXN3-215ENST00000557261 SMAPO00193 183 aa9.11□□□□□ -0.95
FOXN3-215ENST00000557261 PROX2Q3B8N5 592 aa9.11□□□□□ -0.95
FOXN3-215ENST00000557261 SND1Q7KZF4 910 aaKnown RBP eCLIP9.11□□□□□ -0.95
FOXN3-215ENST00000557261 MRPL50Q8N5N7 158 aaKnown RBP9.11□□□□□ -0.95
FOXN3-215ENST00000557261 NBPF3Q9H094 633 aa9.11□□□□□ -0.95
FOXN3-215ENST00000557261 CCDC18Q5T9S5 1454 aa9.1□□□□□ -0.95
FOXN3-215ENST00000557261 KDM4AO75164 1064 aa9.1□□□□□ -0.95
FOXN3-215ENST00000557261 GJA5P36382 358 aa9.1□□□□□ -0.95
FOXN3-215ENST00000557261 PTPN5P54829 565 aa9.1□□□□□ -0.95
FOXN3-215ENST00000557261 RDH13Q8NBN7 331 aa9.1□□□□□ -0.95
FOXN3-215ENST00000557261 CHMP7Q8WUX9 453 aaPredicted RBP9.1□□□□□ -0.95
FOXN3-215ENST00000557261 ZBTB3Q9H5J0 574 aa9.1□□□□□ -0.95
FOXN3-215ENST00000557261 FHOD3Q2V2M9 1422 aa9.1□□□□□ -0.95
FOXN3-215ENST00000557261 LRRIQ1Q96JM4 1722 aa9.09□□□□□ -0.95
FOXN3-215ENST00000557261 GOLGA8CPA6NN73 597 aa9.09□□□□□ -0.95
FOXN3-215ENST00000557261 PATL2C9JE40 543 aaKnown RBP9.09□□□□□ -0.95
FOXN3-215ENST00000557261 HOXA2O43364 376 aa9.09□□□□□ -0.95
FOXN3-215ENST00000557261 WASHC4Q2M389 1173 aa9.09□□□□□ -0.95
FOXN3-215ENST00000557261 PRPF38BQ5VTL8 546 aaKnown RBP9.09□□□□□ -0.95
FOXN3-215ENST00000557261 THSD4Q6ZMP0 1018 aa9.09□□□□□ -0.95
FOXN3-215ENST00000557261 TBC1D9Q6ZT07 1266 aa9.09□□□□□ -0.95
FOXN3-215ENST00000557261 SULF1Q8IWU6 871 aa9.09□□□□□ -0.95
FOXN3-215ENST00000557261 TSC1Q92574 1164 aa9.09□□□□□ -0.95
FOXN3-215ENST00000557261 TMEM134Q9H6X4 195 aa9.09□□□□□ -0.95
FOXN3-215ENST00000557261 CARMIL2Q6F5E8 1435 aa9.08□□□□□ -0.96
FOXN3-215ENST00000557261 CFAP99D6REC4 459 aa9.08□□□□□ -0.96
FOXN3-215ENST00000557261 FDX1P10109 184 aa9.08□□□□□ -0.96
FOXN3-215ENST00000557261 DNAJB2P25686 324 aa9.08□□□□□ -0.96
FOXN3-215ENST00000557261 PNMA3Q9UL41 463 aa9.08□□□□□ -0.96
FOXN3-215ENST00000557261 RAPGEF6Q8TEU7 1601 aa9.07□□□□□ -0.96
FOXN3-215ENST00000557261 TATDN2Q93075 761 aa9.07□□□□□ -0.96
FOXN3-215ENST00000557261 WNT2BQ93097 391 aa9.07□□□□□ -0.96
FOXN3-215ENST00000557261 MAFBQ9Y5Q3 323 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms