RNA–Protein interactions for RNA: ENST00000556631.1

KTN1-224, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 5,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-224ENST00000556631 DDX27Q96GQ7 796 aaKnown RBP2.25□□□□□ -2.05
KTN1-224ENST00000556631 UBA5Q9GZZ9 404 aa2.25□□□□□ -2.05
KTN1-224ENST00000556631 FBXO2Q9UK22 296 aaPredicted RBP2.25□□□□□ -2.05
KTN1-224ENST00000556631 COMMD10Q9Y6G5 202 aa2.25□□□□□ -2.05
KTN1-224ENST00000556631 FAM170AA1A519 330 aa2.25□□□□□ -2.05
KTN1-224ENST00000556631 SFI1A8K8P3 1242 aa2.25□□□□□ -2.05
KTN1-224ENST00000556631 CHAF1AQ13111 956 aaPredicted RBP2.25□□□□□ -2.05
KTN1-224ENST00000556631 NAALADL2Q58DX5 795 aa2.25□□□□□ -2.05
KTN1-224ENST00000556631 TTLL5Q6EMB2 1281 aa2.25□□□□□ -2.05
KTN1-224ENST00000556631 HELBQ8NG08 1087 aaPredicted RBP2.25□□□□□ -2.05
KTN1-224ENST00000556631 TCHPQ9BT92 498 aa2.25□□□□□ -2.05
KTN1-224ENST00000556631 CNPY4Q8N129 248 aa2.24□□□□□ -2.05
KTN1-224ENST00000556631 ZNF428Q96B54 188 aa2.24□□□□□ -2.05
KTN1-224ENST00000556631 SPATA32Q96LK8 384 aa2.24□□□□□ -2.05
KTN1-224ENST00000556631 MAP10Q9P2G4 905 aa2.24□□□□□ -2.05
KTN1-224ENST00000556631 SALL2Q9Y467 1007 aaPredicted RBP2.24□□□□□ -2.05
KTN1-224ENST00000556631 TSPY2A6NKD2 308 aa2.24□□□□□ -2.05
KTN1-224ENST00000556631 ZBBXA8MT70 800 aa2.24□□□□□ -2.05
KTN1-224ENST00000556631 GIGYF1O75420 1035 aaPredicted RBP2.24□□□□□ -2.05
KTN1-224ENST00000556631 TSPY3P0CV98 308 aa2.24□□□□□ -2.05
KTN1-224ENST00000556631 TSPY8P0CW00 308 aa2.24□□□□□ -2.05
KTN1-224ENST00000556631 EIF4G2P78344 907 aaKnown RBP eCLIP2.24□□□□□ -2.05
KTN1-224ENST00000556631 TSPY1Q01534 308 aa2.24□□□□□ -2.05
KTN1-224ENST00000556631 EAPPQ56P03 285 aaPredicted RBP2.24□□□□□ -2.05
KTN1-224ENST00000556631 FBXW10Q5XX13 1052 aa2.24□□□□□ -2.05
KTN1-224ENST00000556631 SND1Q7KZF4 910 aaKnown RBP eCLIP2.24□□□□□ -2.05
KTN1-224ENST00000556631 CRBNQ96SW2 442 aa2.24□□□□□ -2.05
KTN1-224ENST00000556631 INPP5FQ9Y2H2 1132 aa2.24□□□□□ -2.05
KTN1-224ENST00000556631 PRR29P0C7W0 189 aa2.24□□□□□ -2.05
KTN1-224ENST00000556631 GTF2E1P29083 439 aaPredicted RBP2.24□□□□□ -2.05
KTN1-224ENST00000556631 PSMD2Q13200 908 aa2.24□□□□□ -2.05
KTN1-224ENST00000556631 NFE2L2Q16236 605 aa2.24□□□□□ -2.05
KTN1-224ENST00000556631 FOXD4L6Q3SYB3 417 aaPredicted RBP2.24□□□□□ -2.05
KTN1-224ENST00000556631 FOXD4L3Q6VB84 417 aaPredicted RBP2.24□□□□□ -2.05
KTN1-224ENST00000556631 NOC3LQ8WTT2 800 aaKnown RBP2.24□□□□□ -2.05
KTN1-224ENST00000556631 PPM1EQ8WY54 764 aa2.24□□□□□ -2.05
KTN1-224ENST00000556631 HINFPQ9BQA5 517 aa2.24□□□□□ -2.05
KTN1-224ENST00000556631 IFT57Q9NWB7 429 aa2.24□□□□□ -2.05
KTN1-224ENST00000556631 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.24□□□□□ -2.05
KTN1-224ENST00000556631 FAM177BA6PVY3 158 aa2.24□□□□□ -2.05
KTN1-224ENST00000556631 FOSP01100 380 aaPredicted RBP2.24□□□□□ -2.05
KTN1-224ENST00000556631 DSG3P32926 999 aa2.24□□□□□ -2.05
KTN1-224ENST00000556631 TPD52P55327 224 aaPredicted RBP2.24□□□□□ -2.05
KTN1-224ENST00000556631 BIRC3Q13489 604 aa2.24□□□□□ -2.05
KTN1-224ENST00000556631 SEPT6Q14141 434 aa2.24□□□□□ -2.05
KTN1-224ENST00000556631 KSR2Q6VAB6 950 aa2.24□□□□□ -2.05
KTN1-224ENST00000556631 RPAINQ86UA6 219 aa2.24□□□□□ -2.05
KTN1-224ENST00000556631 SIX5Q8N196 739 aa2.24□□□□□ -2.05
KTN1-224ENST00000556631 TRIM52Q96A61 297 aa2.24□□□□□ -2.05
KTN1-224ENST00000556631 CEP63Q96MT8 703 aa2.24□□□□□ -2.05
KTN1-224ENST00000556631 TSPYL2Q9H2G4 693 aaPredicted RBP2.24□□□□□ -2.05
KTN1-224ENST00000556631 MINK1Q8N4C8 1332 aaPredicted RBP2.24□□□□□ -2.05
KTN1-224ENST00000556631 DNAJC6O75061 913 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 FCHSD2O94868 740 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 CCDC157Q569K6 752 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 CCDC125Q86Z20 511 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 ATL2Q8NHH9 583 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 CTNNBL1Q8WYA6 563 aaPredicted RBP2.23□□□□□ -2.05
KTN1-224ENST00000556631 NECTIN2Q92692 538 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 CDK5RAP3Q96JB5 506 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 FEZ1Q99689 392 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 TRIM66O15016 1216 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 PRC1O43663 620 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 ABCB7O75027 752 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 PYGBP11216 843 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 ATF3P18847 181 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 MAPK8P45983 427 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 C9orf131Q5VYM1 1079 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 LRRC43Q8N309 656 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 TRIML1Q8N9V2 468 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 CCT6BQ92526 530 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 GOPCQ9HD26 462 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 CCER2I3L3R5 266 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 KIAA0754O94854 1291 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 CCDC175P0C221 793 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 TNNT1P13805 278 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 NASPP49321 788 aaPredicted RBP2.23□□□□□ -2.05
KTN1-224ENST00000556631 PDAP1Q13442 181 aaKnown RBP2.23□□□□□ -2.05
KTN1-224ENST00000556631 SYCP1Q15431 976 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 ODF2Q5BJF6 829 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 ANO1Q5XXA6 986 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 FILIP1Q7Z7B0 1213 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 ATRIPQ8WXE1 791 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 DDX12PQ92771 950 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 DEF6Q9H4E7 631 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 DDX41Q9UJV9 622 aaKnown RBP2.23□□□□□ -2.05
KTN1-224ENST00000556631 IKBKGQ9Y6K9 419 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 GOLGA6CA6NDK9 693 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 GOLGA6BA6NDN3 693 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 GOLGA6DP0CG33 693 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 DEKP35659 375 aaKnown RBP2.23□□□□□ -2.05
KTN1-224ENST00000556631 PDE3BQ13370 1112 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 SART3Q15020 963 aaKnown RBP2.23□□□□□ -2.05
KTN1-224ENST00000556631 HDGFL1Q5TGJ6 251 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 CC2D1AQ6P1N0 951 aaPredicted RBP2.23□□□□□ -2.05
KTN1-224ENST00000556631 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.23□□□□□ -2.05
KTN1-224ENST00000556631 FERMT3Q86UX7 667 aa2.23□□□□□ -2.05
KTN1-224ENST00000556631 SMAP1Q8IYB5 467 aaPredicted RBP2.23□□□□□ -2.05
KTN1-224ENST00000556631 MSL3Q8N5Y2 521 aaKnown RBP2.23□□□□□ -2.05
KTN1-224ENST00000556631 CCDC89Q8N998 374 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms