RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 SP4Q02446 784 aa3.99□□□□□ -1.77
SYNE2-212ENST00000554584 TOM1L2Q6ZVM7 507 aa3.99□□□□□ -1.77
SYNE2-212ENST00000554584 RIC3Q7Z5B4 369 aa3.98□□□□□ -1.77
SYNE2-212ENST00000554584 MRPS9P82933 396 aaKnown RBP3.98□□□□□ -1.77
SYNE2-212ENST00000554584 CABLES1Q8TDN4 633 aa3.98□□□□□ -1.77
SYNE2-212ENST00000554584 MACROD2A1Z1Q3 448 aa3.98□□□□□ -1.77
SYNE2-212ENST00000554584 ATF3P18847 181 aa3.98□□□□□ -1.77
SYNE2-212ENST00000554584 GPTP24298 496 aa3.98□□□□□ -1.77
SYNE2-212ENST00000554584 PDE4DIPQ5VU43 2346 aa3.98□□□□□ -1.77
SYNE2-212ENST00000554584 WASHC2CQ9Y4E1 1318 aa3.98□□□□□ -1.77
SYNE2-212ENST00000554584 MSL1Q68DK7 614 aa3.98□□□□□ -1.77
SYNE2-212ENST00000554584 AMOTL1Q8IY63 956 aa3.98□□□□□ -1.77
SYNE2-212ENST00000554584 HSP90AB4PQ58FF6 505 aa3.98□□□□□ -1.77
SYNE2-212ENST00000554584 GOLGA6L3A6NEY3 463 aa3.98□□□□□ -1.77
SYNE2-212ENST00000554584 THUMPD2Q9BTF0 503 aaKnown RBP3.98□□□□□ -1.77
SYNE2-212ENST00000554584 TCHPQ9BT92 498 aa3.98□□□□□ -1.77
SYNE2-212ENST00000554584 SPATA17Q96L03 361 aa3.98□□□□□ -1.77
SYNE2-212ENST00000554584 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.98□□□□□ -1.77
SYNE2-212ENST00000554584 C9orf78Q9NZ63 289 aaPredicted RBP3.98□□□□□ -1.77
SYNE2-212ENST00000554584 TEFQ10587 303 aa3.98□□□□□ -1.77
SYNE2-212ENST00000554584 TRIM29Q14134 588 aa3.98□□□□□ -1.77
SYNE2-212ENST00000554584 CCDC157Q569K6 752 aa3.98□□□□□ -1.77
SYNE2-212ENST00000554584 KANK4Q5T7N3 995 aaPredicted RBP3.98□□□□□ -1.77
SYNE2-212ENST00000554584 CTNNBL1Q8WYA6 563 aaPredicted RBP3.98□□□□□ -1.77
SYNE2-212ENST00000554584 CCDC113Q9H0I3 377 aa3.98□□□□□ -1.77
SYNE2-212ENST00000554584 CPLX1O14810 134 aa3.98□□□□□ -1.77
SYNE2-212ENST00000554584 ABCC8Q09428 1581 aa3.98□□□□□ -1.77
SYNE2-212ENST00000554584 SMC1AQ14683 1233 aaKnown RBP3.97□□□□□ -1.77
SYNE2-212ENST00000554584 TPM2P07951 284 aa3.97□□□□□ -1.77
SYNE2-212ENST00000554584 CCDC96Q2M329 555 aa3.97□□□□□ -1.77
SYNE2-212ENST00000554584 RNF214Q8ND24 703 aa3.97□□□□□ -1.77
SYNE2-212ENST00000554584 OTUD6BQ8N6M0 293 aa3.97□□□□□ -1.77
SYNE2-212ENST00000554584 DZIP1LQ8IYY4 767 aaKnown RBP3.97□□□□□ -1.77
SYNE2-212ENST00000554584 PPP2R5CQ13362 524 aa3.97□□□□□ -1.77
SYNE2-212ENST00000554584 GPATCH3Q96I76 525 aa3.97□□□□□ -1.77
SYNE2-212ENST00000554584 TMCO5BA8MYB1 307 aa3.97□□□□□ -1.77
SYNE2-212ENST00000554584 SH3BP5O60239 455 aa3.97□□□□□ -1.77
SYNE2-212ENST00000554584 SMARCA5O60264 1052 aaPredicted RBP3.97□□□□□ -1.77
SYNE2-212ENST00000554584 GSE1Q14687 1217 aa3.97□□□□□ -1.77
SYNE2-212ENST00000554584 KCNQ4P56696 695 aa3.97□□□□□ -1.77
SYNE2-212ENST00000554584 PANK1Q8TE04 598 aa3.97□□□□□ -1.77
SYNE2-212ENST00000554584 GJA3Q9Y6H8 435 aa3.96□□□□□ -1.77
SYNE2-212ENST00000554584 NF2P35240 595 aa3.96□□□□□ -1.77
SYNE2-212ENST00000554584 NKX1-1Q15270 411 aaPredicted RBP3.96□□□□□ -1.77
SYNE2-212ENST00000554584 CHMP4AQ9BY43 222 aa3.96□□□□□ -1.77
SYNE2-212ENST00000554584 DDX17Q92841 729 aaKnown RBP3.96□□□□□ -1.77
SYNE2-212ENST00000554584 RUFY1Q96T51 708 aa3.96□□□□□ -1.77
SYNE2-212ENST00000554584 CCDC144CPQ8IYA2 1237 aa3.96□□□□□ -1.78
SYNE2-212ENST00000554584 GBP4Q96PP9 640 aa3.96□□□□□ -1.78
SYNE2-212ENST00000554584 BIRC2Q13490 618 aa3.96□□□□□ -1.78
SYNE2-212ENST00000554584 SOGA3Q5TF21 947 aa3.96□□□□□ -1.78
SYNE2-212ENST00000554584 IL27Q8NEV9 243 aa3.96□□□□□ -1.78
SYNE2-212ENST00000554584 PUF60Q9UHX1 559 aaKnown RBP3.96□□□□□ -1.78
SYNE2-212ENST00000554584 HTATSF1O43719 755 aaKnown RBP3.96□□□□□ -1.78
SYNE2-212ENST00000554584 SLC9A5Q14940 896 aa3.96□□□□□ -1.78
SYNE2-212ENST00000554584 SPC24Q8NBT2 197 aa3.96□□□□□ -1.78
SYNE2-212ENST00000554584 C8orf37Q96NL8 207 aa3.96□□□□□ -1.78
SYNE2-212ENST00000554584 PANK3Q9H999 370 aa3.96□□□□□ -1.78
SYNE2-212ENST00000554584 ZNF76P36508 570 aa3.96□□□□□ -1.78
SYNE2-212ENST00000554584 SYCP1Q15431 976 aa3.96□□□□□ -1.78
SYNE2-212ENST00000554584 FAM13BQ9NYF5 915 aa3.96□□□□□ -1.78
SYNE2-212ENST00000554584 CLIP1P30622 1438 aa3.96□□□□□ -1.78
SYNE2-212ENST00000554584 TSR2Q969E8 191 aaKnown RBP3.96□□□□□ -1.78
SYNE2-212ENST00000554584 NFKBIBQ15653 356 aa3.96□□□□□ -1.78
SYNE2-212ENST00000554584 MPRIPQ6WCQ1 1025 aa3.96□□□□□ -1.78
SYNE2-212ENST00000554584 CDK5RAP3Q96JB5 506 aa3.96□□□□□ -1.78
SYNE2-212ENST00000554584 SPAG9O60271 1321 aaKnown RBP3.96□□□□□ -1.78
SYNE2-212ENST00000554584 RPGRIP1LQ68CZ1 1315 aa3.96□□□□□ -1.78
SYNE2-212ENST00000554584 UBE4AQ14139 1066 aa3.96□□□□□ -1.78
SYNE2-212ENST00000554584 KSR1Q8IVT5 923 aa3.96□□□□□ -1.78
SYNE2-212ENST00000554584 GTF3C6Q969F1 213 aa3.96□□□□□ -1.78
SYNE2-212ENST00000554584 GUCY1B3Q02153 619 aa3.95□□□□□ -1.78
SYNE2-212ENST00000554584 CCDC112Q8NEF3 446 aa3.95□□□□□ -1.78
SYNE2-212ENST00000554584 SIRT1Q96EB6 747 aa3.95□□□□□ -1.78
SYNE2-212ENST00000554584 CNNM1Q9NRU3 951 aa3.95□□□□□ -1.78
SYNE2-212ENST00000554584 SBNO2Q9Y2G9 1366 aa3.95□□□□□ -1.78
SYNE2-212ENST00000554584 BCAR3O75815 825 aa3.95□□□□□ -1.78
SYNE2-212ENST00000554584 IFIT2P09913 472 aaKnown RBP3.95□□□□□ -1.78
SYNE2-212ENST00000554584 SUDS3Q9H7L9 328 aaPredicted RBP3.95□□□□□ -1.78
SYNE2-212ENST00000554584 DIAPH3Q9NSV4 1193 aa3.95□□□□□ -1.78
SYNE2-212ENST00000554584 UBAP1LF5GYI3 381 aa3.95□□□□□ -1.78
SYNE2-212ENST00000554584 STK25O00506 426 aa3.95□□□□□ -1.78
SYNE2-212ENST00000554584 CALD1Q05682 793 aaKnown RBP3.95□□□□□ -1.78
SYNE2-212ENST00000554584 ZYXQ15942 572 aaKnown RBP3.95□□□□□ -1.78
SYNE2-212ENST00000554584 C16orf71Q8IYS4 520 aaPredicted RBP3.95□□□□□ -1.78
SYNE2-212ENST00000554584 DIDO1Q9BTC0 2240 aaKnown RBP3.95□□□□□ -1.78
SYNE2-212ENST00000554584 SMC2O95347 1197 aa3.95□□□□□ -1.78
SYNE2-212ENST00000554584 NLRP6P59044 892 aa3.95□□□□□ -1.78
SYNE2-212ENST00000554584 ERICH4A6NGS2 130 aa3.95□□□□□ -1.78
SYNE2-212ENST00000554584 PDE3BQ13370 1112 aa3.95□□□□□ -1.78
SYNE2-212ENST00000554584 FKBP5Q13451 457 aaPredicted RBP3.95□□□□□ -1.78
SYNE2-212ENST00000554584 PLS1Q14651 629 aa3.95□□□□□ -1.78
SYNE2-212ENST00000554584 ANKRD12Q6UB98 2062 aa3.95□□□□□ -1.78
SYNE2-212ENST00000554584 BECN2A8MW95 431 aa3.95□□□□□ -1.78
SYNE2-212ENST00000554584 PANK2Q9BZ23 570 aa3.95□□□□□ -1.78
SYNE2-212ENST00000554584 USP8P40818 1118 aa3.95□□□□□ -1.78
SYNE2-212ENST00000554584 CLSTN2Q9H4D0 955 aa3.95□□□□□ -1.78
SYNE2-212ENST00000554584 APAF1O14727 1248 aa3.95□□□□□ -1.78
SYNE2-212ENST00000554584 MYBP10242 640 aa3.95□□□□□ -1.78
SYNE2-212ENST00000554584 SYAP1Q96A49 352 aaPredicted RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms