RNA–Protein interactions for RNA: ENST00000554423.1

IFT43-208, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-208ENST00000554423 PRR7Q8TB68 274 aa5.47□□□□□ -1.53
IFT43-208ENST00000554423 HLA-CQ95604 372 aa5.47□□□□□ -1.53
IFT43-208ENST00000554423 FCF1Q9Y324 198 aaKnown RBP5.47□□□□□ -1.53
IFT43-208ENST00000554423 CLK2P49760 499 aaKnown RBP5.46□□□□□ -1.54
IFT43-208ENST00000554423 CCDC24Q8N4L8 307 aa5.46□□□□□ -1.54
IFT43-208ENST00000554423 KRTAP4-8Q9BYQ9 185 aa5.46□□□□□ -1.54
IFT43-208ENST00000554423 GPBP1L1Q9HC44 474 aaPredicted RBP5.46□□□□□ -1.54
IFT43-208ENST00000554423 PCDHGC3Q9UN70 934 aa5.46□□□□□ -1.54
IFT43-208ENST00000554423 GDF11O95390 407 aa5.45□□□□□ -1.54
IFT43-208ENST00000554423 CSPP1Q1MSJ5 1256 aa5.45□□□□□ -1.54
IFT43-208ENST00000554423 SH3D19Q5HYK7 790 aa5.45□□□□□ -1.54
IFT43-208ENST00000554423 SYMPKQ92797 1274 aaKnown RBP5.45□□□□□ -1.54
IFT43-208ENST00000554423 FAM117AQ9C073 453 aa5.45□□□□□ -1.54
IFT43-208ENST00000554423 POLR3EQ9NVU0 708 aa5.45□□□□□ -1.54
IFT43-208ENST00000554423 HRCP23327 699 aa5.44□□□□□ -1.54
IFT43-208ENST00000554423 PTPRNQ16849 979 aa5.44□□□□□ -1.54
IFT43-208ENST00000554423 HELBQ8NG08 1087 aaPredicted RBP5.44□□□□□ -1.54
IFT43-208ENST00000554423 PCMTD1Q96MG8 357 aaPredicted RBP5.44□□□□□ -1.54
IFT43-208ENST00000554423 GOPCQ9HD26 462 aa5.44□□□□□ -1.54
IFT43-208ENST00000554423 PCDHB15Q9Y5E8 787 aa5.44□□□□□ -1.54
IFT43-208ENST00000554423 CCNYL3P0C7X3 344 aa5.43□□□□□ -1.54
IFT43-208ENST00000554423 VEGFBP49765 207 aa5.43□□□□□ -1.54
IFT43-208ENST00000554423 NPAS3Q8IXF0 933 aa5.43□□□□□ -1.54
IFT43-208ENST00000554423 NUDT12Q9BQG2 462 aa5.43□□□□□ -1.54
IFT43-208ENST00000554423 PRDM9Q9NQV7 894 aa5.43□□□□□ -1.54
IFT43-208ENST00000554423 LILRB3O75022 631 aa5.42□□□□□ -1.54
IFT43-208ENST00000554423 IL27Q8NEV9 243 aa5.42□□□□□ -1.54
IFT43-208ENST00000554423 TSC1Q92574 1164 aa5.42□□□□□ -1.54
IFT43-208ENST00000554423 GSK3AP49840 483 aa5.41□□□□□ -1.54
IFT43-208ENST00000554423 BRPF1P55201 1214 aaPredicted RBP5.41□□□□□ -1.54
IFT43-208ENST00000554423 RASSF7Q02833 373 aa5.41□□□□□ -1.54
IFT43-208ENST00000554423 LYPD8Q6UX82 237 aa5.41□□□□□ -1.54
IFT43-208ENST00000554423 ARMC2Q8NEN0 867 aa5.41□□□□□ -1.54
IFT43-208ENST00000554423 EVA1BQ9NVM1 165 aa5.41□□□□□ -1.54
IFT43-208ENST00000554423 LIMD1Q9UGP4 676 aa5.41□□□□□ -1.54
IFT43-208ENST00000554423 CTHP32929 405 aa5.4□□□□□ -1.54
IFT43-208ENST00000554423 WNT7BP56706 349 aa5.4□□□□□ -1.54
IFT43-208ENST00000554423 KCNH2Q12809 1159 aa5.4□□□□□ -1.54
IFT43-208ENST00000554423 TRIM32Q13049 653 aa5.4□□□□□ -1.54
IFT43-208ENST00000554423 PNMA1Q8ND90 353 aa5.4□□□□□ -1.54
IFT43-208ENST00000554423 CABLES1Q8TDN4 633 aa5.4□□□□□ -1.54
IFT43-208ENST00000554423 PLEKHG3A1L390 1219 aa5.39□□□□□ -1.55
IFT43-208ENST00000554423 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.39□□□□□ -1.55
IFT43-208ENST00000554423 CFAP99D6REC4 459 aa5.39□□□□□ -1.55
IFT43-208ENST00000554423 H3BM21 787 aa5.39□□□□□ -1.55
IFT43-208ENST00000554423 QPCTQ16769 361 aa5.39□□□□□ -1.55
IFT43-208ENST00000554423 GPAT2Q6NUI2 795 aa5.39□□□□□ -1.55
IFT43-208ENST00000554423 PSMG3-AS1Q96PY0 264 aa5.39□□□□□ -1.55
IFT43-208ENST00000554423 ERBB4Q15303 1308 aa5.39□□□□□ -1.55
IFT43-208ENST00000554423 SMPD1P17405 629 aa5.38□□□□□ -1.55
IFT43-208ENST00000554423 TMEM259Q4ZIN3 620 aa5.38□□□□□ -1.55
IFT43-208ENST00000554423 PPP2R2DQ66LE6 453 aa5.38□□□□□ -1.55
IFT43-208ENST00000554423 SNIP1Q8TAD8 396 aaKnown RBP5.38□□□□□ -1.55
IFT43-208ENST00000554423 RNF225M0QZC1 329 aaPredicted RBP5.37□□□□□ -1.55
IFT43-208ENST00000554423 WNT7AO00755 349 aa5.37□□□□□ -1.55
IFT43-208ENST00000554423 RTL5Q5HYW3 569 aaPredicted RBP5.37□□□□□ -1.55
IFT43-208ENST00000554423 PROCA1Q8NCQ7 364 aaPredicted RBP5.37□□□□□ -1.55
IFT43-208ENST00000554423 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.37□□□□□ -1.55
IFT43-208ENST00000554423 KRTAP9-2Q9BYQ4 174 aa5.37□□□□□ -1.55
IFT43-208ENST00000554423 AP1G2O75843 785 aa5.36□□□□□ -1.55
IFT43-208ENST00000554423 IGHA1P01876 353 aa5.36□□□□□ -1.55
IFT43-208ENST00000554423 PRKCSHP14314 528 aaPredicted RBP5.36□□□□□ -1.55
IFT43-208ENST00000554423 UNC93B1Q9H1C4 597 aa5.36□□□□□ -1.55
IFT43-208ENST00000554423 KRTAP9-6A0A140TA67 174 aa5.35□□□□□ -1.55
IFT43-208ENST00000554423 APBB1O00213 710 aa5.35□□□□□ -1.55
IFT43-208ENST00000554423 RC3H1Q5TC82 1133 aaKnown RBP5.35□□□□□ -1.55
IFT43-208ENST00000554423 NBPF14Q5TI25 921 aa5.35□□□□□ -1.55
IFT43-208ENST00000554423 PTCRAQ6ISU1 281 aaPredicted RBP5.35□□□□□ -1.55
IFT43-208ENST00000554423 AGERQ15109 404 aa5.34□□□□□ -1.55
IFT43-208ENST00000554423 BPHLQ86WA6 291 aaPredicted RBP5.34□□□□□ -1.55
IFT43-208ENST00000554423 KRTAP1-3Q8IUG1 177 aa5.34□□□□□ -1.55
IFT43-208ENST00000554423 EHBP1Q8NDI1 1231 aa5.34□□□□□ -1.55
IFT43-208ENST00000554423 BAP1Q92560 729 aa5.34□□□□□ -1.55
IFT43-208ENST00000554423 HPS1Q92902 700 aa5.34□□□□□ -1.55
IFT43-208ENST00000554423 GPKOWQ92917 476 aaPredicted RBP eCLIP5.34□□□□□ -1.55
IFT43-208ENST00000554423 J3QL48 77 aa5.33□□□□□ -1.56
IFT43-208ENST00000554423 VARSP26640 1264 aaKnown RBP5.33□□□□□ -1.56
IFT43-208ENST00000554423 RFC5P40937 340 aa5.33□□□□□ -1.56
IFT43-208ENST00000554423 CTDSPL2Q05D32 466 aa5.33□□□□□ -1.56
IFT43-208ENST00000554423 ZNF511Q8NB15 262 aa5.33□□□□□ -1.56
IFT43-208ENST00000554423 FAM174AQ8TBP5 190 aa5.33□□□□□ -1.56
IFT43-208ENST00000554423 ZC3H4Q9UPT8 1303 aaKnown RBP5.32□□□□□ -1.56
IFT43-208ENST00000554423 PER1O15534 1290 aaPredicted RBP5.32□□□□□ -1.56
IFT43-208ENST00000554423 F12P00748 615 aaPredicted RBP5.32□□□□□ -1.56
IFT43-208ENST00000554423 SH3BP2P78314 561 aa5.32□□□□□ -1.56
IFT43-208ENST00000554423 BANK1Q8NDB2 785 aa5.32□□□□□ -1.56
IFT43-208ENST00000554423 MRGPRX2Q96LB1 330 aa5.32□□□□□ -1.56
IFT43-208ENST00000554423 PRM3Q9NNZ6 103 aa5.32□□□□□ -1.56
IFT43-208ENST00000554423 SKOR1P84550 965 aa5.31□□□□□ -1.56
IFT43-208ENST00000554423 LINC01559Q495D7 138 aa5.31□□□□□ -1.56
IFT43-208ENST00000554423 MAP10Q9P2G4 905 aa5.31□□□□□ -1.56
IFT43-208ENST00000554423 WASF2Q9Y6W5 498 aa5.31□□□□□ -1.56
IFT43-208ENST00000554423 ALDH1A1P00352 501 aa5.3□□□□□ -1.56
IFT43-208ENST00000554423 MPNDQ8N594 471 aa5.3□□□□□ -1.56
IFT43-208ENST00000554423 TRIM52Q96A61 297 aa5.3□□□□□ -1.56
IFT43-208ENST00000554423 FKBPLQ9UIM3 349 aa5.3□□□□□ -1.56
IFT43-208ENST00000554423 DNMT3AQ9Y6K1 912 aaPredicted RBP5.3□□□□□ -1.56
IFT43-208ENST00000554423 USP17L8P0C7I0 530 aa5.29□□□□□ -1.56
IFT43-208ENST00000554423 PTK2Q05397 1052 aa5.29□□□□□ -1.56
IFT43-208ENST00000554423 PDXDC2PQ6P474 469 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms