RNA–Protein interactions for RNA: ENST00000553804.5

ITGA7-206, Transcript of integrin subunit alpha 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGA7, Length 3,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-206ENST00000553804 SASS6Q6UVJ0 657 aa12.81□□□□□ -0.36
ITGA7-206ENST00000553804 PLCD3Q8N3E9 789 aa12.81□□□□□ -0.36
ITGA7-206ENST00000553804 FAM135AQ9P2D6 1515 aa12.8□□□□□ -0.36
ITGA7-206ENST00000553804 RBSNQ9H1K0 784 aa12.8□□□□□ -0.36
ITGA7-206ENST00000553804 GDPD2Q9HCC8 539 aa12.8□□□□□ -0.36
ITGA7-206ENST00000553804 C17orf53Q8N3J3 647 aaPredicted RBP12.8□□□□□ -0.36
ITGA7-206ENST00000553804 TRERF1Q96PN7 1200 aa12.8□□□□□ -0.36
ITGA7-206ENST00000553804 CIZ1Q9ULV3 898 aaPredicted RBP12.8□□□□□ -0.36
ITGA7-206ENST00000553804 ADGBQ8N7X0 1667 aa12.8□□□□□ -0.36
ITGA7-206ENST00000553804 TMEM57Q8N5G2 664 aa12.8□□□□□ -0.36
ITGA7-206ENST00000553804 SYAP1Q96A49 352 aaPredicted RBP12.8□□□□□ -0.36
ITGA7-206ENST00000553804 SHANK2Q9UPX8 1470 aa12.79□□□□□ -0.36
ITGA7-206ENST00000553804 ERBINQ96RT1 1412 aa12.79□□□□□ -0.36
ITGA7-206ENST00000553804 NPHP1O15259 732 aa12.79□□□□□ -0.36
ITGA7-206ENST00000553804 MYO5CQ9NQX4 1742 aa12.78□□□□□ -0.36
ITGA7-206ENST00000553804 DYNC1I1O14576 645 aa12.78□□□□□ -0.36
ITGA7-206ENST00000553804 KLHL40Q2TBA0 621 aa12.78□□□□□ -0.36
ITGA7-206ENST00000553804 CHD1LQ86WJ1 897 aa12.78□□□□□ -0.36
ITGA7-206ENST00000553804 RIMBP3CA6NJZ7 1639 aa12.78□□□□□ -0.36
ITGA7-206ENST00000553804 RIMBP3BA6NNM3 1639 aa12.78□□□□□ -0.36
ITGA7-206ENST00000553804 RIMBP3Q9UFD9 1639 aa12.78□□□□□ -0.36
ITGA7-206ENST00000553804 SMAP1Q8IYB5 467 aaPredicted RBP12.78□□□□□ -0.36
ITGA7-206ENST00000553804 RAB3GAP1Q15042 981 aa12.77□□□□□ -0.36
ITGA7-206ENST00000553804 KIF16BQ96L93 1317 aa12.77□□□□□ -0.36
ITGA7-206ENST00000553804 CFAP70Q5T0N1 1121 aa12.77□□□□□ -0.37
ITGA7-206ENST00000553804 ZKSCAN5Q9Y2L8 839 aa12.77□□□□□ -0.37
ITGA7-206ENST00000553804 TTC12Q9H892 705 aaPredicted RBP12.77□□□□□ -0.37
ITGA7-206ENST00000553804 USP25Q9UHP3 1055 aa12.77□□□□□ -0.37
ITGA7-206ENST00000553804 PDCL2Q8N4E4 241 aa12.76□□□□□ -0.37
ITGA7-206ENST00000553804 KIF3AQ9Y496 699 aa12.76□□□□□ -0.37
ITGA7-206ENST00000553804 PREX2Q70Z35 1606 aa12.76□□□□□ -0.37
ITGA7-206ENST00000553804 SSH1Q8WYL5 1049 aa12.76□□□□□ -0.37
ITGA7-206ENST00000553804 TAOK2Q9UL54 1235 aa12.76□□□□□ -0.37
ITGA7-206ENST00000553804 ERICH4A6NGS2 130 aa12.76□□□□□ -0.37
ITGA7-206ENST00000553804 TRIM6-TRIM34B2RNG4 842 aa12.76□□□□□ -0.37
ITGA7-206ENST00000553804 TRIM27P14373 513 aa12.76□□□□□ -0.37
ITGA7-206ENST00000553804 NEK4P51957 841 aa12.76□□□□□ -0.37
ITGA7-206ENST00000553804 TSPY26PQ9H489 355 aa12.76□□□□□ -0.37
ITGA7-206ENST00000553804 CDC42BPBQ9Y5S2 1711 aa12.75□□□□□ -0.37
ITGA7-206ENST00000553804 ARHGEF12Q9NZN5 1544 aa12.75□□□□□ -0.37
ITGA7-206ENST00000553804 CD2BP2O95400 341 aaKnown RBP12.75□□□□□ -0.37
ITGA7-206ENST00000553804 TNNT3P45378 269 aaPredicted RBP12.75□□□□□ -0.37
ITGA7-206ENST00000553804 TESK2Q96S53 571 aa12.75□□□□□ -0.37
ITGA7-206ENST00000553804 ATF7IPQ6VMQ6 1270 aa12.75□□□□□ -0.37
ITGA7-206ENST00000553804 SLC12A5Q9H2X9 1139 aa12.75□□□□□ -0.37
ITGA7-206ENST00000553804 TBC1D9Q6ZT07 1266 aa12.74□□□□□ -0.37
ITGA7-206ENST00000553804 CHMP4BQ9H444 224 aaKnown RBP12.74□□□□□ -0.37
ITGA7-206ENST00000553804 CDC45O75419 566 aa12.74□□□□□ -0.37
ITGA7-206ENST00000553804 TERF1P54274 439 aa12.74□□□□□ -0.37
ITGA7-206ENST00000553804 CCDC27Q2M243 656 aa12.74□□□□□ -0.37
ITGA7-206ENST00000553804 STK26Q9P289 416 aa12.74□□□□□ -0.37
ITGA7-206ENST00000553804 PKP1Q13835 747 aa12.73□□□□□ -0.37
ITGA7-206ENST00000553804 RILPL2Q969X0 211 aa12.73□□□□□ -0.37
ITGA7-206ENST00000553804 ZGPATQ8N5A5 531 aaKnown RBP12.73□□□□□ -0.37
ITGA7-206ENST00000553804 IFT57Q9NWB7 429 aa12.73□□□□□ -0.37
ITGA7-206ENST00000553804 GOLGA6L4A6NEF3 574 aa12.73□□□□□ -0.37
ITGA7-206ENST00000553804 TMEM132EQ6IEE7 984 aa12.73□□□□□ -0.37
ITGA7-206ENST00000553804 CCDC94Q9BW85 323 aaPredicted RBP12.73□□□□□ -0.37
ITGA7-206ENST00000553804 NOL7Q9UMY1 257 aaKnown RBP12.73□□□□□ -0.37
ITGA7-206ENST00000553804 SRPK2P78362 688 aaKnown RBP12.72□□□□□ -0.37
ITGA7-206ENST00000553804 HMGN5P82970 282 aaKnown RBP12.72□□□□□ -0.37
ITGA7-206ENST00000553804 SMC5Q8IY18 1101 aa12.72□□□□□ -0.37
ITGA7-206ENST00000553804 CHMP4AQ9BY43 222 aa12.72□□□□□ -0.37
ITGA7-206ENST00000553804 SLC4A10Q6U841 1118 aa12.72□□□□□ -0.37
ITGA7-206ENST00000553804 PHF14O94880 888 aa12.71□□□□□ -0.37
ITGA7-206ENST00000553804 ARHGEF5Q12774 1597 aa12.71□□□□□ -0.37
ITGA7-206ENST00000553804 DNAJC5Q9H3Z4 198 aa12.71□□□□□ -0.37
ITGA7-206ENST00000553804 PRDM4Q9UKN5 801 aa12.71□□□□□ -0.37
ITGA7-206ENST00000553804 ANO2Q9NQ90 1003 aa12.71□□□□□ -0.38
ITGA7-206ENST00000553804 CROCC2H7BZ55 1655 aa12.71□□□□□ -0.38
ITGA7-206ENST00000553804 RABEP1Q15276 862 aa12.7□□□□□ -0.38
ITGA7-206ENST00000553804 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.7□□□□□ -0.38
ITGA7-206ENST00000553804 RALGAPBQ86X10 1494 aa12.7□□□□□ -0.38
ITGA7-206ENST00000553804 FIBPO43427 364 aa12.7□□□□□ -0.38
ITGA7-206ENST00000553804 MCCP23508 829 aa12.7□□□□□ -0.38
ITGA7-206ENST00000553804 DUOX2Q9NRD8 1548 aa12.7□□□□□ -0.38
ITGA7-206ENST00000553804 PRAG1Q86YV5 1406 aa12.7□□□□□ -0.38
ITGA7-206ENST00000553804 DTNBO60941 627 aa12.69□□□□□ -0.38
ITGA7-206ENST00000553804 TSPOAP1O95153 1857 aa12.69□□□□□ -0.38
ITGA7-206ENST00000553804 PPP1R9BQ96SB3 815 aa12.69□□□□□ -0.38
ITGA7-206ENST00000553804 GGNBP2Q9H3C7 697 aa12.69□□□□□ -0.38
ITGA7-206ENST00000553804 DIAPH3Q9NSV4 1193 aa12.69□□□□□ -0.38
ITGA7-206ENST00000553804 BCORL1Q5H9F3 1711 aa12.69□□□□□ -0.38
ITGA7-206ENST00000553804 U2AF2P26368 475 aaKnown RBP eCLIP12.69□□□□□ -0.38
ITGA7-206ENST00000553804 AEBP1Q8IUX7 1158 aa12.69□□□□□ -0.38
ITGA7-206ENST00000553804 LARP6Q9BRS8 491 aaKnown RBP12.69□□□□□ -0.38
ITGA7-206ENST00000553804 THUMPD2Q9BTF0 503 aaKnown RBP12.69□□□□□ -0.38
ITGA7-206ENST00000553804 KCNJ4P48050 445 aa12.68□□□□□ -0.38
ITGA7-206ENST00000553804 NGEFQ8N5V2 710 aa12.68□□□□□ -0.38
ITGA7-206ENST00000553804 CFAP65Q6ZU64 1925 aaKnown RBP12.68□□□□□ -0.38
ITGA7-206ENST00000553804 MBD3O95983 291 aa12.68□□□□□ -0.38
ITGA7-206ENST00000553804 NOLC1Q14978 699 aaKnown RBP eCLIP12.68□□□□□ -0.38
ITGA7-206ENST00000553804 INTS3Q68E01 1043 aaKnown RBP12.68□□□□□ -0.38
ITGA7-206ENST00000553804 ADGRF5Q8IZF2 1346 aa12.68□□□□□ -0.38
ITGA7-206ENST00000553804 BLMP54132 1417 aaPredicted RBP12.68□□□□□ -0.38
ITGA7-206ENST00000553804 ZMYM4Q5VZL5 1548 aa12.68□□□□□ -0.38
ITGA7-206ENST00000553804 SOX12O15370 315 aa12.68□□□□□ -0.38
ITGA7-206ENST00000553804 UPF3BQ9BZI7 483 aaKnown RBP12.68□□□□□ -0.38
ITGA7-206ENST00000553804 A2MP01023 1474 aa12.68□□□□□ -0.38
ITGA7-206ENST00000553804 ABCC1P33527 1531 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms