RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 NUP188Q5SRE5 1749 aa14.55□□□□□ -0.08
CHD8-205ENST00000553651 TRIM37O94972 964 aa14.55□□□□□ -0.08
CHD8-205ENST00000553651 PARD3Q8TEW0 1356 aa14.55□□□□□ -0.08
CHD8-205ENST00000553651 SPATA31A1Q5TZJ5 1347 aa14.54□□□□□ -0.08
CHD8-205ENST00000553651 PRR36Q9H6K5 1346 aa14.53□□□□□ -0.08
CHD8-205ENST00000553651 PRAM1Q96QH2 718 aa14.53□□□□□ -0.08
CHD8-205ENST00000553651 DLC1Q96QB1 1528 aa14.52□□□□□ -0.08
CHD8-205ENST00000553651 FAM196AQ6ZSG2 479 aa14.52□□□□□ -0.09
CHD8-205ENST00000553651 ACIN1Q9UKV3 1341 aaKnown RBP14.51□□□□□ -0.09
CHD8-205ENST00000553651 APBA3O96018 575 aa14.51□□□□□ -0.09
CHD8-205ENST00000553651 SAFB2Q14151 953 aaKnown RBP eCLIP14.51□□□□□ -0.09
CHD8-205ENST00000553651 CFAP70Q5T0N1 1121 aa14.51□□□□□ -0.09
CHD8-205ENST00000553651 DHX57Q6P158 1386 aaKnown RBP14.5□□□□□ -0.09
CHD8-205ENST00000553651 PRDM11Q9NQV5 511 aa14.48□□□□□ -0.09
CHD8-205ENST00000553651 GPRASP1Q5JY77 1395 aa14.47□□□□□ -0.09
CHD8-205ENST00000553651 KIAA0232Q92628 1395 aa14.47□□□□□ -0.09
CHD8-205ENST00000553651 NINLQ9Y2I6 1382 aa14.47□□□□□ -0.09
CHD8-205ENST00000553651 ADGRB1O14514 1584 aa14.47□□□□□ -0.09
CHD8-205ENST00000553651 TULP4Q9NRJ4 1543 aa14.47□□□□□ -0.09
CHD8-205ENST00000553651 CAMTA1Q9Y6Y1 1673 aa14.47□□□□□ -0.09
CHD8-205ENST00000553651 PHRF1Q9P1Y6 1649 aaKnown RBP14.47□□□□□ -0.09
CHD8-205ENST00000553651 CHRNA2Q15822 529 aa14.46□□□□□ -0.09
CHD8-205ENST00000553651 BARGINQ6ZT62 677 aa14.46□□□□□ -0.09
CHD8-205ENST00000553651 KCNQ2O43526 872 aa14.45□□□□□ -0.1
CHD8-205ENST00000553651 SPON1Q9HCB6 807 aa14.45□□□□□ -0.1
CHD8-205ENST00000553651 MPHOSPH9Q99550 1183 aa14.44□□□□□ -0.1
CHD8-205ENST00000553651 HIRIP3Q9BW71 556 aaPredicted RBP14.44□□□□□ -0.1
CHD8-205ENST00000553651 SSH2Q76I76 1423 aa14.43□□□□□ -0.1
CHD8-205ENST00000553651 NBPF8Q3BBV2 869 aa14.43□□□□□ -0.1
CHD8-205ENST00000553651 NBPF14Q5TI25 921 aa14.43□□□□□ -0.1
CHD8-205ENST00000553651 POGKQ9P215 609 aa14.43□□□□□ -0.1
CHD8-205ENST00000553651 CASZ1Q86V15 1759 aa14.42□□□□□ -0.1
CHD8-205ENST00000553651 WASLO00401 505 aaPredicted RBP14.42□□□□□ -0.1
CHD8-205ENST00000553651 STRN4Q9NRL3 753 aa14.42□□□□□ -0.1
CHD8-205ENST00000553651 LMO7Q8WWI1 1683 aa14.42□□□□□ -0.1
CHD8-205ENST00000553651 MINK1Q8N4C8 1332 aaPredicted RBP14.41□□□□□ -0.1
CHD8-205ENST00000553651 PEAK1Q9H792 1746 aa14.41□□□□□ -0.1
CHD8-205ENST00000553651 EIF3AQ14152 1382 aaKnown RBP14.41□□□□□ -0.1
CHD8-205ENST00000553651 RGPD3A6NKT7 1758 aaPredicted RBP14.4□□□□□ -0.1
CHD8-205ENST00000553651 RGPD4Q7Z3J3 1758 aa14.4□□□□□ -0.1
CHD8-205ENST00000553651 ATP7BP35670 1465 aa14.4□□□□□ -0.1
CHD8-205ENST00000553651 PAK3O75914 559 aaPredicted RBP14.4□□□□□ -0.1
CHD8-205ENST00000553651 ZC3H6P61129 1189 aaKnown RBP14.4□□□□□ -0.1
CHD8-205ENST00000553651 PDE3BQ13370 1112 aa14.4□□□□□ -0.1
CHD8-205ENST00000553651 LARP1Q6PKG0 1096 aaKnown RBP14.4□□□□□ -0.1
CHD8-205ENST00000553651 NGDNQ8NEJ9 315 aaKnown RBP14.4□□□□□ -0.1
CHD8-205ENST00000553651 ANO8Q9HCE9 1232 aaPredicted RBP14.4□□□□□ -0.1
CHD8-205ENST00000553651 USP35Q9P2H5 1018 aa14.4□□□□□ -0.1
CHD8-205ENST00000553651 PPP1R1BQ9UD71 204 aaPredicted RBP14.4□□□□□ -0.1
CHD8-205ENST00000553651 PARP4Q9UKK3 1724 aaKnown RBP14.4□□□□□ -0.1
CHD8-205ENST00000553651 NRKQ7Z2Y5 1582 aa14.39□□□□□ -0.11
CHD8-205ENST00000553651 ZNF784Q8NCA9 323 aaPredicted RBP14.39□□□□□ -0.11
CHD8-205ENST00000553651 TRAK1Q9UPV9 953 aa14.39□□□□□ -0.11
CHD8-205ENST00000553651 UTRNP46939 3433 aa14.38□□□□□ -0.11
CHD8-205ENST00000553651 TCP11L2Q8N4U5 519 aa14.38□□□□□ -0.11
CHD8-205ENST00000553651 PDGFDQ9GZP0 370 aaPredicted RBP14.38□□□□□ -0.11
CHD8-205ENST00000553651 SBF2Q86WG5 1849 aa14.37□□□□□ -0.11
CHD8-205ENST00000553651 MYOM1P52179 1685 aa14.36□□□□□ -0.11
CHD8-205ENST00000553651 CPDO75976 1380 aa14.36□□□□□ -0.11
CHD8-205ENST00000553651 ITSN1Q15811 1721 aa14.36□□□□□ -0.11
CHD8-205ENST00000553651 PTGER2P43116 358 aa14.36□□□□□ -0.11
CHD8-205ENST00000553651 NUTM2GQ5VZR2 741 aa14.36□□□□□ -0.11
CHD8-205ENST00000553651 USP19O94966 1318 aa14.36□□□□□ -0.11
CHD8-205ENST00000553651 POLR3AO14802 1390 aaPredicted RBP14.35□□□□□ -0.11
CHD8-205ENST00000553651 PLSCR1O15162 318 aa14.35□□□□□ -0.11
CHD8-205ENST00000553651 PTF1AQ7RTS3 328 aa14.35□□□□□ -0.11
CHD8-205ENST00000553651 THRAP3Q9Y2W1 955 aaKnown RBP14.35□□□□□ -0.11
CHD8-205ENST00000553651 TOPAZ1Q8N9V7 1692 aa14.35□□□□□ -0.11
CHD8-205ENST00000553651 DCAF8L1A6NGE4 600 aa14.34□□□□□ -0.11
CHD8-205ENST00000553651 EVA1CP58658 441 aa14.34□□□□□ -0.11
CHD8-205ENST00000553651 PROM2Q8N271 834 aa14.34□□□□□ -0.11
CHD8-205ENST00000553651 NUDT16Q96DE0 195 aaKnown RBP14.34□□□□□ -0.11
CHD8-205ENST00000553651 COL5A2P05997 1499 aaPredicted RBP14.33□□□□□ -0.12
CHD8-205ENST00000553651 LRRC37A3O60309 1634 aa14.33□□□□□ -0.12
CHD8-205ENST00000553651 OVOS2A0A0G2JMS6 1433 aa14.32□□□□□ -0.12
CHD8-205ENST00000553651 OVOS2A0A0J9YW53 1432 aa14.32□□□□□ -0.12
CHD8-205ENST00000553651 OVOS2Q6IE36 1432 aa14.32□□□□□ -0.12
CHD8-205ENST00000553651 ARHGEF28Q8N1W1 1705 aaKnown RBP14.32□□□□□ -0.12
CHD8-205ENST00000553651 C11orf95C9JLR9 678 aaPredicted RBP14.31□□□□□ -0.12
CHD8-205ENST00000553651 ACEP12821 1306 aa14.31□□□□□ -0.12
CHD8-205ENST00000553651 ZBTB7AO95365 584 aa14.3□□□□□ -0.12
CHD8-205ENST00000553651 SGIP1Q9BQI5 828 aa14.3□□□□□ -0.12
CHD8-205ENST00000553651 CHD4Q14839 1912 aa14.3□□□□□ -0.12
CHD8-205ENST00000553651 SENP3-EIF4A1A0A087X0R7 540 aa14.29□□□□□ -0.12
CHD8-205ENST00000553651 PLEKHG3A1L390 1219 aa14.29□□□□□ -0.12
CHD8-205ENST00000553651 C1QTNF8P60827 252 aa14.29□□□□□ -0.12
CHD8-205ENST00000553651 SYT17Q9BSW7 474 aa14.29□□□□□ -0.12
CHD8-205ENST00000553651 BCL11BQ9C0K0 894 aaPredicted RBP14.29□□□□□ -0.12
CHD8-205ENST00000553651 BCL9O00512 1426 aa14.29□□□□□ -0.12
CHD8-205ENST00000553651 CRB1P82279 1406 aa14.29□□□□□ -0.12
CHD8-205ENST00000553651 CEP350Q5VT06 3117 aa14.29□□□□□ -0.12
CHD8-205ENST00000553651 GCP02774 474 aa14.28□□□□□ -0.12
CHD8-205ENST00000553651 IFFO2Q5TF58 517 aa14.28□□□□□ -0.12
CHD8-205ENST00000553651 CDK19Q9BWU1 502 aa14.28□□□□□ -0.12
CHD8-205ENST00000553651 ABTB2Q8N961 1025 aa14.27□□□□□ -0.13
CHD8-205ENST00000553651 FHDC1Q9C0D6 1143 aaPredicted RBP14.27□□□□□ -0.13
CHD8-205ENST00000553651 ATF5Q9Y2D1 282 aaPredicted RBP14.27□□□□□ -0.13
CHD8-205ENST00000553651 WNK3Q9BYP7 1800 aa14.27□□□□□ -0.13
CHD8-205ENST00000553651 MARCH10Q8NA82 808 aaPredicted RBP14.26□□□□□ -0.13
CHD8-205ENST00000553651 CCDC61Q9Y6R9 512 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms