RNA–Protein interactions for RNA: ENST00000550023.5

KRR1-203, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 2

Gene KRR1, Length 855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-203ENST00000550023 SULF1Q8IWU6 871 aa8.38□□□□□ -1.07
KRR1-203ENST00000550023 SOGA1O94964 1423 aa8.37□□□□□ -1.07
KRR1-203ENST00000550023 PPFIA3O75145 1194 aa8.37□□□□□ -1.07
KRR1-203ENST00000550023 USB1Q9BQ65 265 aaKnown RBP8.37□□□□□ -1.07
KRR1-203ENST00000550023 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.36□□□□□ -1.07
KRR1-203ENST00000550023 CNTNAP3BQ96NU0 1288 aa8.36□□□□□ -1.07
KRR1-203ENST00000550023 PCGF6Q9BYE7 350 aa8.36□□□□□ -1.07
KRR1-203ENST00000550023 KRTAP9-2Q9BYQ4 174 aa8.36□□□□□ -1.07
KRR1-203ENST00000550023 CNTNAP3Q9BZ76 1288 aa8.36□□□□□ -1.07
KRR1-203ENST00000550023 SCARF2Q96GP6 870 aaPredicted RBP8.35□□□□□ -1.07
KRR1-203ENST00000550023 MSTNO14793 375 aa8.34□□□□□ -1.07
KRR1-203ENST00000550023 MLLT3P42568 568 aaPredicted RBP8.34□□□□□ -1.07
KRR1-203ENST00000550023 ZNF385CQ66K41 422 aaPredicted RBP8.32□□□□□ -1.08
KRR1-203ENST00000550023 PRXQ9BXM0 1461 aa8.32□□□□□ -1.08
KRR1-203ENST00000550023 CUX1P39880 1505 aa8.31□□□□□ -1.08
KRR1-203ENST00000550023 KRTAP9-6A0A140TA67 174 aa8.31□□□□□ -1.08
KRR1-203ENST00000550023 PLEKHG3A1L390 1219 aa8.31□□□□□ -1.08
KRR1-203ENST00000550023 ZEB1P37275 1124 aaPredicted RBP8.31□□□□□ -1.08
KRR1-203ENST00000550023 ADH1CP00326 375 aa8.29□□□□□ -1.08
KRR1-203ENST00000550023 KRT76Q01546 638 aa8.29□□□□□ -1.08
KRR1-203ENST00000550023 NNTQ13423 1086 aa8.29□□□□□ -1.08
KRR1-203ENST00000550023 VPS8Q8N3P4 1428 aa8.29□□□□□ -1.08
KRR1-203ENST00000550023 WDR4P57081 412 aaKnown RBP8.28□□□□□ -1.08
KRR1-203ENST00000550023 KRTAP1-3Q8IUG1 177 aa8.28□□□□□ -1.08
KRR1-203ENST00000550023 FAM9AQ8IZU1 332 aaPredicted RBP8.27□□□□□ -1.09
KRR1-203ENST00000550023 GALNT6Q8NCL4 622 aa8.27□□□□□ -1.09
KRR1-203ENST00000550023 RUSC2Q8N2Y8 1516 aa8.27□□□□□ -1.09
KRR1-203ENST00000550023 TIMP2P16035 220 aa8.26□□□□□ -1.09
KRR1-203ENST00000550023 Q8N3U1 123 aa8.26□□□□□ -1.09
KRR1-203ENST00000550023 COL25A1Q9BXS0 654 aaPredicted RBP8.26□□□□□ -1.09
KRR1-203ENST00000550023 CLIP1P30622 1438 aa8.26□□□□□ -1.09
KRR1-203ENST00000550023 KIF27Q86VH2 1401 aa8.26□□□□□ -1.09
KRR1-203ENST00000550023 HIC1Q14526 733 aa8.25□□□□□ -1.09
KRR1-203ENST00000550023 C6orf118Q5T5N4 469 aa8.25□□□□□ -1.09
KRR1-203ENST00000550023 GPR161Q8N6U8 529 aaKnown RBP8.25□□□□□ -1.09
KRR1-203ENST00000550023 SPOCK3Q9BQ16 436 aa8.25□□□□□ -1.09
KRR1-203ENST00000550023 RAPGEF2Q9Y4G8 1499 aa8.25□□□□□ -1.09
KRR1-203ENST00000550023 ARHGEF15O94989 841 aa8.24□□□□□ -1.09
KRR1-203ENST00000550023 UPP2O95045 317 aa8.24□□□□□ -1.09
KRR1-203ENST00000550023 TLL2Q9Y6L7 1015 aa8.24□□□□□ -1.09
KRR1-203ENST00000550023 CC2D2AQ9P2K1 1620 aa8.24□□□□□ -1.09
KRR1-203ENST00000550023 CADPSQ9ULU8 1353 aa8.23□□□□□ -1.09
KRR1-203ENST00000550023 K7ELQ4 463 aaPredicted RBP8.23□□□□□ -1.09
KRR1-203ENST00000550023 JUNDP17535 347 aa8.23□□□□□ -1.09
KRR1-203ENST00000550023 SH3BP2P78314 561 aa8.23□□□□□ -1.09
KRR1-203ENST00000550023 PLA2G4EQ3MJ16 856 aa8.23□□□□□ -1.09
KRR1-203ENST00000550023 AMER1Q5JTC6 1135 aaPredicted RBP8.23□□□□□ -1.09
KRR1-203ENST00000550023 NUDT12Q9BQG2 462 aa8.22□□□□□ -1.09
KRR1-203ENST00000550023 DNMBPQ6XZF7 1577 aa8.22□□□□□ -1.09
KRR1-203ENST00000550023 BMP2P12643 396 aa8.21□□□□□ -1.1
KRR1-203ENST00000550023 MPNDQ8N594 471 aa8.21□□□□□ -1.1
KRR1-203ENST00000550023 SPRYD3Q8NCJ5 442 aa8.21□□□□□ -1.1
KRR1-203ENST00000550023 BBXQ8WY36 941 aaPredicted RBP8.21□□□□□ -1.1
KRR1-203ENST00000550023 ARHGEF1Q92888 912 aaKnown RBP8.21□□□□□ -1.1
KRR1-203ENST00000550023 LAMC3Q9Y6N6 1575 aa8.2□□□□□ -1.1
KRR1-203ENST00000550023 SLURP2P0DP57 97 aa8.2□□□□□ -1.1
KRR1-203ENST00000550023 WHAMMQ8TF30 809 aa8.2□□□□□ -1.1
KRR1-203ENST00000550023 ARAP1Q96P48 1450 aa8.19□□□□□ -1.1
KRR1-203ENST00000550023 VARSP26640 1264 aaKnown RBP8.19□□□□□ -1.1
KRR1-203ENST00000550023 MAP3K10Q02779 954 aa8.19□□□□□ -1.1
KRR1-203ENST00000550023 PTCRAQ6ISU1 281 aaPredicted RBP8.19□□□□□ -1.1
KRR1-203ENST00000550023 PHF20L1A8MW92 1017 aa8.18□□□□□ -1.1
KRR1-203ENST00000550023 NLRP7Q8WX94 980 aa8.18□□□□□ -1.1
KRR1-203ENST00000550023 MAP3K1Q13233 1512 aa8.18□□□□□ -1.1
KRR1-203ENST00000550023 KDM4AO75164 1064 aa8.17□□□□□ -1.1
KRR1-203ENST00000550023 ZIC2O95409 532 aaPredicted RBP8.17□□□□□ -1.1
KRR1-203ENST00000550023 NANOS1Q8WY41 292 aaKnown RBP8.17□□□□□ -1.1
KRR1-203ENST00000550023 ABCA10Q8WWZ4 1543 aa8.17□□□□□ -1.1
KRR1-203ENST00000550023 CUL7Q14999 1698 aa8.17□□□□□ -1.1
KRR1-203ENST00000550023 WDR97A6NE52 1622 aa8.16□□□□□ -1.1
KRR1-203ENST00000550023 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.16□□□□□ -1.1
KRR1-203ENST00000550023 RNFT1Q5M7Z0 435 aa8.16□□□□□ -1.1
KRR1-203ENST00000550023 FGD5Q6ZNL6 1462 aa8.16□□□□□ -1.1
KRR1-203ENST00000550023 DCAF5Q96JK2 942 aa8.16□□□□□ -1.1
KRR1-203ENST00000550023 FANCD2Q9BXW9 1451 aa8.16□□□□□ -1.1
KRR1-203ENST00000550023 ENAMQ9NRM1 1142 aa8.16□□□□□ -1.1
KRR1-203ENST00000550023 EFCAB5A4FU69 1503 aa8.15□□□□□ -1.1
KRR1-203ENST00000550023 USP46P62068 366 aa8.15□□□□□ -1.1
KRR1-203ENST00000550023 LCE3BQ5TA77 95 aa8.15□□□□□ -1.1
KRR1-203ENST00000550023 KLF16Q9BXK1 252 aaPredicted RBP8.15□□□□□ -1.1
KRR1-203ENST00000550023 DNMT3LQ9UJW3 386 aa8.15□□□□□ -1.1
KRR1-203ENST00000550023 LINC01559Q495D7 138 aa8.14□□□□□ -1.11
KRR1-203ENST00000550023 LINC00528Q8N1L1 170 aa8.14□□□□□ -1.11
KRR1-203ENST00000550023 SOS2Q07890 1332 aaPredicted RBP8.13□□□□□ -1.11
KRR1-203ENST00000550023 GNPATO15228 680 aa8.13□□□□□ -1.11
KRR1-203ENST00000550023 PROCP04070 461 aa8.13□□□□□ -1.11
KRR1-203ENST00000550023 CCNYL3P0C7X3 344 aa8.13□□□□□ -1.11
KRR1-203ENST00000550023 ZFAND3Q9H8U3 227 aa8.13□□□□□ -1.11
KRR1-203ENST00000550023 CUX2O14529 1486 aa8.13□□□□□ -1.11
KRR1-203ENST00000550023 BTBD11A6QL63 1104 aa8.12□□□□□ -1.11
KRR1-203ENST00000550023 PTSQ03393 145 aa8.12□□□□□ -1.11
KRR1-203ENST00000550023 PODNQ7Z5L7 613 aa8.12□□□□□ -1.11
KRR1-203ENST00000550023 FAM174AQ8TBP5 190 aa8.12□□□□□ -1.11
KRR1-203ENST00000550023 TOPBP1Q92547 1522 aa8.12□□□□□ -1.11
KRR1-203ENST00000550023 ARHGAP35Q9NRY4 1499 aa8.12□□□□□ -1.11
KRR1-203ENST00000550023 CFAP43Q8NDM7 1665 aa8.11□□□□□ -1.11
KRR1-203ENST00000550023 ABCA5Q8WWZ7 1642 aa8.11□□□□□ -1.11
KRR1-203ENST00000550023 UBTFP17480 764 aaKnown RBP8.11□□□□□ -1.11
KRR1-203ENST00000550023 BAP1Q92560 729 aa8.11□□□□□ -1.11
KRR1-203ENST00000550023 ITPKCQ96DU7 683 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms