RNA–Protein interactions for RNA: ENST00000550023.5

KRR1-203, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 2

Gene KRR1, Length 855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-203ENST00000550023 AEBP2Q6ZN18 517 aaPredicted RBP25.71■■□□□ 1.71
KRR1-203ENST00000550023 CHIC1Q5VXU3 224 aa24.22■■□□□ 1.47
KRR1-203ENST00000550023 SENP3Q9H4L4 574 aaPredicted RBP22.23■■□□□ 1.15
KRR1-203ENST00000550023 PHF23Q9BUL5 403 aaPredicted RBP21.77■■□□□ 1.08
KRR1-203ENST00000550023 FOXD1Q16676 465 aa20.7■□□□□ 0.9
KRR1-203ENST00000550023 POTEDQ86YR6 584 aa20.6■□□□□ 0.89
KRR1-203ENST00000550023 MSH5O43196 834 aa19.83■□□□□ 0.77
KRR1-203ENST00000550023 PIAS4Q8N2W9 510 aaPredicted RBP19.25■□□□□ 0.67
KRR1-203ENST00000550023 PPP6R1Q9UPN7 881 aa18.69■□□□□ 0.58
KRR1-203ENST00000550023 PLPPR3Q6T4P5 718 aa18.67■□□□□ 0.58
KRR1-203ENST00000550023 ADRA2BP18089 450 aa18.64■□□□□ 0.57
KRR1-203ENST00000550023 CACNB1Q02641 598 aaPredicted RBP17.51■□□□□ 0.39
KRR1-203ENST00000550023 DMRT2Q9Y5R5 561 aa17.44■□□□□ 0.38
KRR1-203ENST00000550023 MAPK8IP2Q13387 824 aaPredicted RBP17.33■□□□□ 0.36
KRR1-203ENST00000550023 SCAF1Q9H7N4 1312 aaKnown RBP17.23■□□□□ 0.35
KRR1-203ENST00000550023 DCAF8L1A6NGE4 600 aa16.89■□□□□ 0.29
KRR1-203ENST00000550023 RNF39Q9H2S5 420 aa16.75■□□□□ 0.27
KRR1-203ENST00000550023 C1QBPQ07021 282 aaKnown RBP16.54■□□□□ 0.24
KRR1-203ENST00000550023 HOXD11P31277 338 aaPredicted RBP16.47■□□□□ 0.23
KRR1-203ENST00000550023 PPP4R3CPQ6ZMV5 832 aa16.21■□□□□ 0.19
KRR1-203ENST00000550023 RNF216Q9NWF9 866 aaPredicted RBP16.18■□□□□ 0.18
KRR1-203ENST00000550023 CNKSR2Q8WXI2 1034 aa16.13■□□□□ 0.17
KRR1-203ENST00000550023 DNAJC5BQ9UF47 199 aa16.11■□□□□ 0.17
KRR1-203ENST00000550023 POTEHQ6S545 545 aa16.04■□□□□ 0.16
KRR1-203ENST00000550023 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.81■□□□□ 0.127e-8■■■■□ 20
KRR1-203ENST00000550023 NCBP3Q53F19 620 aaKnown RBP15.47■□□□□ 0.07
KRR1-203ENST00000550023 CAPN15O75808 1086 aa15.41■□□□□ 0.06
KRR1-203ENST00000550023 DSG3P32926 999 aa15.41■□□□□ 0.06
KRR1-203ENST00000550023 SPINK5Q9NQ38 1064 aaPredicted RBP15.28■□□□□ 0.04
KRR1-203ENST00000550023 U3KPZ7 1027 aaPredicted RBP15.26■□□□□ 0.03
KRR1-203ENST00000550023 NPM3O75607 178 aaKnown RBP15.09■□□□□ 0.01
KRR1-203ENST00000550023 APLP2Q06481 763 aa14.97□□□□□ -0.01
KRR1-203ENST00000550023 TRHP20396 242 aaPredicted RBP14.95□□□□□ -0.02
KRR1-203ENST00000550023 ZNF219Q9P2Y4 722 aaPredicted RBP14.93□□□□□ -0.02
KRR1-203ENST00000550023 ABCB7O75027 752 aa14.91□□□□□ -0.02
KRR1-203ENST00000550023 RBM42Q9BTD8 480 aaKnown RBP14.87□□□□□ -0.03
KRR1-203ENST00000550023 CHRDL2Q6WN34 429 aa14.78□□□□□ -0.04
KRR1-203ENST00000550023 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.73□□□□□ -0.05
KRR1-203ENST00000550023 HNRNPUL2Q1KMD3 747 aaKnown RBP14.73□□□□□ -0.05
KRR1-203ENST00000550023 SP7Q8TDD2 431 aaPredicted RBP14.66□□□□□ -0.06
KRR1-203ENST00000550023 SLC4A2P04920 1241 aa14.58□□□□□ -0.08
KRR1-203ENST00000550023 SAMD1Q6SPF0 538 aaPredicted RBP14.57□□□□□ -0.08
KRR1-203ENST00000550023 POLA2Q14181 598 aa14.33□□□□□ -0.12
KRR1-203ENST00000550023 AKT1S1Q96B36 256 aa14.3□□□□□ -0.12
KRR1-203ENST00000550023 HAX1O00165 279 aa14.26□□□□□ -0.13
KRR1-203ENST00000550023 PIP4P2Q8N4L2 257 aa14.21□□□□□ -0.13
KRR1-203ENST00000550023 REM2Q8IYK8 340 aaPredicted RBP14.12□□□□□ -0.15
KRR1-203ENST00000550023 ZBTB12Q9Y330 459 aaPredicted RBP14.09□□□□□ -0.15
KRR1-203ENST00000550023 KCNA4P22459 653 aa14.08□□□□□ -0.16
KRR1-203ENST00000550023 MYCNP04198 464 aaPredicted RBP14.06□□□□□ -0.16
KRR1-203ENST00000550023 FXR2P51116 673 aaKnown RBP eCLIP13.99□□□□□ -0.17
KRR1-203ENST00000550023 PITPNM1O00562 1244 aa13.96□□□□□ -0.17
KRR1-203ENST00000550023 OSCARQ8IYS5 282 aa13.89□□□□□ -0.19
KRR1-203ENST00000550023 EVX2Q03828 476 aa13.85□□□□□ -0.19
KRR1-203ENST00000550023 LHX8Q68G74 356 aa13.75□□□□□ -0.21
KRR1-203ENST00000550023 ATF5Q9Y2D1 282 aaPredicted RBP13.65□□□□□ -0.22
KRR1-203ENST00000550023 PRKAR2AP13861 404 aaKnown RBP13.63□□□□□ -0.23
KRR1-203ENST00000550023 PLSCR2Q9NRY7 297 aa13.6□□□□□ -0.23
KRR1-203ENST00000550023 GABBR2O75899 941 aa13.59□□□□□ -0.23
KRR1-203ENST00000550023 C19orf67A6NJJ6 358 aa13.58□□□□□ -0.24
KRR1-203ENST00000550023 CLEC11AQ9Y240 323 aa13.53□□□□□ -0.24
KRR1-203ENST00000550023 SPDYE2BA6NHP3 402 aa13.52□□□□□ -0.25
KRR1-203ENST00000550023 SPDYE6P0CI01 402 aa13.52□□□□□ -0.25
KRR1-203ENST00000550023 SPDYE2Q495Y8 402 aa13.52□□□□□ -0.25
KRR1-203ENST00000550023 SPDYE1Q8NFV5 336 aaPredicted RBP13.52□□□□□ -0.25
KRR1-203ENST00000550023 FOXD4L1Q9NU39 408 aa13.47□□□□□ -0.25
KRR1-203ENST00000550023 FBLN2P98095 1184 aa13.4□□□□□ -0.26
KRR1-203ENST00000550023 CHADLQ6NUI6 762 aa13.26□□□□□ -0.29
KRR1-203ENST00000550023 CLCN6P51797 869 aa13.23□□□□□ -0.29
KRR1-203ENST00000550023 ZNF692Q9BU19 519 aaPredicted RBP13.23□□□□□ -0.29
KRR1-203ENST00000550023 POTEIP0CG38 1075 aa13.21□□□□□ -0.29
KRR1-203ENST00000550023 SLC4A1APQ9BWU0 796 aaKnown RBP13.21□□□□□ -0.29
KRR1-203ENST00000550023 PRR29P0C7W0 189 aa13.19□□□□□ -0.3
KRR1-203ENST00000550023 SSUH2Q9Y2M2 353 aa13.18□□□□□ -0.3
KRR1-203ENST00000550023 CD44P16070 742 aaKnown RBP13.17□□□□□ -0.3
KRR1-203ENST00000550023 DCBLD2Q96PD2 775 aa13.17□□□□□ -0.3
KRR1-203ENST00000550023 ATXN8OSP0DMR3 200 aa13.14□□□□□ -0.31
KRR1-203ENST00000550023 FARP1Q9Y4F1 1045 aaPredicted RBP13.02□□□□□ -0.33
KRR1-203ENST00000550023 POTEMA6NI47 508 aa13□□□□□ -0.33
KRR1-203ENST00000550023 MKRN4PQ13434 485 aaPredicted RBP12.99□□□□□ -0.33
KRR1-203ENST00000550023 PABPN1Q86U42 306 aaKnown RBP eCLIP12.99□□□□□ -0.33
KRR1-203ENST00000550023 POTEGQ6S5H5 508 aa12.92□□□□□ -0.34
KRR1-203ENST00000550023 OTUD5Q96G74 571 aa12.92□□□□□ -0.34
KRR1-203ENST00000550023 ZNF579Q8NAF0 562 aaKnown RBP12.9□□□□□ -0.34
KRR1-203ENST00000550023 PCDH10Q9P2E7 1040 aa12.9□□□□□ -0.34
KRR1-203ENST00000550023 ZRANB1Q9UGI0 708 aa12.86□□□□□ -0.35
KRR1-203ENST00000550023 ZBTB22O15209 634 aa12.85□□□□□ -0.35
KRR1-203ENST00000550023 GALR2O43603 387 aaPredicted RBP12.76□□□□□ -0.37
KRR1-203ENST00000550023 POTEB2H3BUK9 544 aa12.75□□□□□ -0.37
KRR1-203ENST00000550023 PAK3O75914 559 aaPredicted RBP12.7□□□□□ -0.38
KRR1-203ENST00000550023 MAMSTRQ6ZN01 415 aa12.62□□□□□ -0.39
KRR1-203ENST00000550023 CREBZFQ9NS37 354 aa12.57□□□□□ -0.4
KRR1-203ENST00000550023 PHF12Q96QT6 1004 aa12.56□□□□□ -0.4
KRR1-203ENST00000550023 METRNQ9UJH8 293 aa12.56□□□□□ -0.4
KRR1-203ENST00000550023 STAG3Q9UJ98 1225 aa12.55□□□□□ -0.4
KRR1-203ENST00000550023 PELP1Q8IZL8 1130 aaKnown RBP12.54□□□□□ -0.4
KRR1-203ENST00000550023 SLC39A7Q92504 469 aa12.54□□□□□ -0.4
KRR1-203ENST00000550023 FAM163AQ96GL9 167 aaPredicted RBP12.54□□□□□ -0.4
KRR1-203ENST00000550023 C7P10643 843 aa12.53□□□□□ -0.4
KRR1-203ENST00000550023 SCUBE2Q9NQ36 999 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms