RNA–Protein interactions for RNA: ENST00000548220.1

PTPRR-207, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 1,374 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-207ENST00000548220 SETD1AO15047 1707 aaKnown RBP8.8□□□□□ -1
PTPRR-207ENST00000548220 NBPF8Q3BBV2 869 aa8.8□□□□□ -1
PTPRR-207ENST00000548220 ABCC11Q96J66 1382 aa8.8□□□□□ -1
PTPRR-207ENST00000548220 IQGAP1P46940 1657 aa8.79□□□□□ -1
PTPRR-207ENST00000548220 ZNF710Q8N1W2 664 aa8.79□□□□□ -1
PTPRR-207ENST00000548220 NRXN3Q9Y4C0 1643 aa8.79□□□□□ -1
PTPRR-207ENST00000548220 TECPR2O15040 1411 aa8.79□□□□□ -1
PTPRR-207ENST00000548220 ADAMTS13Q76LX8 1427 aa8.79□□□□□ -1
PTPRR-207ENST00000548220 ADGRB1O14514 1584 aa8.78□□□□□ -1
PTPRR-207ENST00000548220 DOK7Q18PE1 504 aa8.78□□□□□ -1
PTPRR-207ENST00000548220 ROCK2O75116 1388 aaKnown RBP8.78□□□□□ -1
PTPRR-207ENST00000548220 EIF3AQ14152 1382 aaKnown RBP8.78□□□□□ -1
PTPRR-207ENST00000548220 SBNO2Q9Y2G9 1366 aa8.78□□□□□ -1
PTPRR-207ENST00000548220 STRCQ7RTU9 1775 aa8.78□□□□□ -1
PTPRR-207ENST00000548220 CHD2O14647 1828 aaKnown RBP8.78□□□□□ -1
PTPRR-207ENST00000548220 NPHP4O75161 1426 aaPredicted RBP8.78□□□□□ -1
PTPRR-207ENST00000548220 DLC1Q96QB1 1528 aa8.78□□□□□ -1
PTPRR-207ENST00000548220 KNDC1Q76NI1 1749 aa8.77□□□□□ -1.01
PTPRR-207ENST00000548220 EIF4G2P78344 907 aaKnown RBP eCLIP8.77□□□□□ -1.01
PTPRR-207ENST00000548220 EFCAB3Q8N7B9 438 aa8.77□□□□□ -1.01
PTPRR-207ENST00000548220 NCKAP5LQ9HCH0 1330 aa8.77□□□□□ -1.01
PTPRR-207ENST00000548220 LRPPRCP42704 1394 aaKnown RBP8.77□□□□□ -1.01
PTPRR-207ENST00000548220 FAM135BQ49AJ0 1406 aa8.77□□□□□ -1.01
PTPRR-207ENST00000548220 RIMBP2O15034 1052 aa8.76□□□□□ -1.01
PTPRR-207ENST00000548220 HOXB3P14651 431 aaPredicted RBP8.76□□□□□ -1.01
PTPRR-207ENST00000548220 CFAP70Q5T0N1 1121 aa8.76□□□□□ -1.01
PTPRR-207ENST00000548220 PUS7Q96PZ0 661 aaKnown RBP8.76□□□□□ -1.01
PTPRR-207ENST00000548220 CARD11Q9BXL7 1154 aa8.76□□□□□ -1.01
PTPRR-207ENST00000548220 HOXB1P14653 301 aaPredicted RBP8.75□□□□□ -1.01
PTPRR-207ENST00000548220 KRTAP3-3Q9BYR6 98 aa8.75□□□□□ -1.01
PTPRR-207ENST00000548220 KRTAP3-2Q9BYR7 98 aa8.75□□□□□ -1.01
PTPRR-207ENST00000548220 YTHDC2Q9H6S0 1430 aaKnown RBP8.75□□□□□ -1.01
PTPRR-207ENST00000548220 NCOA3Q9Y6Q9 1424 aa8.75□□□□□ -1.01
PTPRR-207ENST00000548220 NBPF1Q3BBV0 1214 aa8.74□□□□□ -1.01
PTPRR-207ENST00000548220 PTCH1Q13635 1447 aa8.74□□□□□ -1.01
PTPRR-207ENST00000548220 USP47Q96K76 1375 aa8.74□□□□□ -1.01
PTPRR-207ENST00000548220 POTEB3A0JP26 581 aa8.73□□□□□ -1.01
PTPRR-207ENST00000548220 RIOK3O14730 519 aaKnown RBP8.73□□□□□ -1.01
PTPRR-207ENST00000548220 KCNA6P17658 529 aa8.73□□□□□ -1.01
PTPRR-207ENST00000548220 CDCA8Q53HL2 280 aa8.73□□□□□ -1.01
PTPRR-207ENST00000548220 POTEBQ6S5H4 581 aa8.73□□□□□ -1.01
PTPRR-207ENST00000548220 XRN1Q8IZH2 1706 aaKnown RBP8.73□□□□□ -1.01
PTPRR-207ENST00000548220 NWD1Q149M9 1564 aa8.73□□□□□ -1.01
PTPRR-207ENST00000548220 CPS1P31327 1500 aa8.73□□□□□ -1.01
PTPRR-207ENST00000548220 NKTRP30414 1462 aaKnown RBP8.73□□□□□ -1.01
PTPRR-207ENST00000548220 SOX12O15370 315 aa8.73□□□□□ -1.01
PTPRR-207ENST00000548220 BCANQ96GW7 911 aa8.73□□□□□ -1.01
PTPRR-207ENST00000548220 ASXL1Q8IXJ9 1541 aa8.72□□□□□ -1.01
PTPRR-207ENST00000548220 METP08581 1390 aa8.72□□□□□ -1.01
PTPRR-207ENST00000548220 ARHGEF28Q8N1W1 1705 aaKnown RBP8.72□□□□□ -1.01
PTPRR-207ENST00000548220 NUTM2DQ5VT03 806 aaPredicted RBP8.72□□□□□ -1.01
PTPRR-207ENST00000548220 ERBB3P21860 1342 aa8.71□□□□□ -1.02
PTPRR-207ENST00000548220 MICALL2Q8IY33 904 aa8.71□□□□□ -1.02
PTPRR-207ENST00000548220 SLC26A8Q96RN1 970 aa8.71□□□□□ -1.02
PTPRR-207ENST00000548220 CENPJQ9HC77 1338 aaPredicted RBP8.7□□□□□ -1.02
PTPRR-207ENST00000548220 TMEM132EQ6IEE7 984 aa8.7□□□□□ -1.02
PTPRR-207ENST00000548220 ZSWIM6Q9HCJ5 1215 aa8.7□□□□□ -1.02
PTPRR-207ENST00000548220 AMOTL2Q9Y2J4 779 aa8.7□□□□□ -1.02
PTPRR-207ENST00000548220 ST20-MTHFSA0A0A6YYL1 179 aa8.69□□□□□ -1.02
PTPRR-207ENST00000548220 TESK2Q96S53 571 aa8.69□□□□□ -1.02
PTPRR-207ENST00000548220 ADGRB2O60241 1585 aa8.69□□□□□ -1.02
PTPRR-207ENST00000548220 HSPA5P11021 654 aaKnown RBP8.68□□□□□ -1.02
PTPRR-207ENST00000548220 TMF1P82094 1093 aa8.68□□□□□ -1.02
PTPRR-207ENST00000548220 POGKQ9P215 609 aa8.68□□□□□ -1.02
PTPRR-207ENST00000548220 PTPRUQ92729 1446 aa8.68□□□□□ -1.02
PTPRR-207ENST00000548220 QRICH2Q9H0J4 1663 aa8.67□□□□□ -1.02
PTPRR-207ENST00000548220 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.67□□□□□ -1.02
PTPRR-207ENST00000548220 ZNF316A6NFI3 1004 aaPredicted RBP8.67□□□□□ -1.02
PTPRR-207ENST00000548220 DCCP43146 1447 aa8.67□□□□□ -1.02
PTPRR-207ENST00000548220 ZFP91Q96JP5 570 aaPredicted RBP8.67□□□□□ -1.02
PTPRR-207ENST00000548220 TAOK2Q9UL54 1235 aa8.67□□□□□ -1.02
PTPRR-207ENST00000548220 TRAK1Q9UPV9 953 aa8.67□□□□□ -1.02
PTPRR-207ENST00000548220 NINLQ9Y2I6 1382 aa8.67□□□□□ -1.02
PTPRR-207ENST00000548220 EVC2Q86UK5 1308 aa8.66□□□□□ -1.02
PTPRR-207ENST00000548220 PRAM1Q96QH2 718 aa8.66□□□□□ -1.02
PTPRR-207ENST00000548220 ROBO2Q9HCK4 1378 aa8.66□□□□□ -1.02
PTPRR-207ENST00000548220 RNF25Q96BH1 459 aaPredicted RBP8.65□□□□□ -1.02
PTPRR-207ENST00000548220 C19orf44Q9H6X5 657 aa8.65□□□□□ -1.02
PTPRR-207ENST00000548220 STK26Q9P289 416 aa8.65□□□□□ -1.02
PTPRR-207ENST00000548220 ATAD2Q6PL18 1390 aa8.64□□□□□ -1.03
PTPRR-207ENST00000548220 IQSEC2Q5JU85 1478 aa8.64□□□□□ -1.03
PTPRR-207ENST00000548220 CDC42BPGQ6DT37 1551 aa8.64□□□□□ -1.03
PTPRR-207ENST00000548220 STRCP1A6NGW2 1772 aa8.64□□□□□ -1.03
PTPRR-207ENST00000548220 ZNF335Q9H4Z2 1342 aaPredicted RBP8.64□□□□□ -1.03
PTPRR-207ENST00000548220 ADGRL3Q9HAR2 1447 aa8.64□□□□□ -1.03
PTPRR-207ENST00000548220 WASLO00401 505 aaPredicted RBP8.63□□□□□ -1.03
PTPRR-207ENST00000548220 VARS2Q5ST30 1063 aaKnown RBP8.63□□□□□ -1.03
PTPRR-207ENST00000548220 PROSER2Q86WR7 435 aaPredicted RBP8.63□□□□□ -1.03
PTPRR-207ENST00000548220 PHF8Q9UPP1 1060 aa8.63□□□□□ -1.03
PTPRR-207ENST00000548220 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.63□□□□□ -1.03
PTPRR-207ENST00000548220 ANKARQ7Z5J8 1434 aa8.63□□□□□ -1.03
PTPRR-207ENST00000548220 WASHC2AQ641Q2 1341 aa8.63□□□□□ -1.03
PTPRR-207ENST00000548220 CCDC7Q96M83 1385 aa8.62□□□□□ -1.03
PTPRR-207ENST00000548220 TMEM92Q6UXU6 159 aa8.62□□□□□ -1.03
PTPRR-207ENST00000548220 MS4A4AQ96JQ5 239 aa8.62□□□□□ -1.03
PTPRR-207ENST00000548220 BRD4O60885 1362 aaPredicted RBP8.62□□□□□ -1.03
PTPRR-207ENST00000548220 ITSN1Q15811 1721 aa8.62□□□□□ -1.03
PTPRR-207ENST00000548220 NLRP6P59044 892 aa8.61□□□□□ -1.03
PTPRR-207ENST00000548220 WAPLQ7Z5K2 1190 aa8.61□□□□□ -1.03
PTPRR-207ENST00000548220 CADPS2Q86UW7 1296 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms