RNA–Protein interactions for RNA: ENST00000547615.1

PTCH1-214, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 525 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-214ENST00000547615 FAM196AQ6ZSG2 479 aa12.21□□□□□ -0.45
PTCH1-214ENST00000547615 CABLES1Q8TDN4 633 aa12.21□□□□□ -0.45
PTCH1-214ENST00000547615 PSDA5PKW4 1024 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-214ENST00000547615 FAM83GA6ND36 823 aa12.2□□□□□ -0.46
PTCH1-214ENST00000547615 PRAM1Q96QH2 718 aa12.2□□□□□ -0.46
PTCH1-214ENST00000547615 MPHOSPH9Q99550 1183 aa12.2□□□□□ -0.46
PTCH1-214ENST00000547615 PRDM11Q9NQV5 511 aa12.19□□□□□ -0.46
PTCH1-214ENST00000547615 EN1Q05925 392 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-214ENST00000547615 NBPF8Q3BBV2 869 aa12.18□□□□□ -0.46
PTCH1-214ENST00000547615 NBPF14Q5TI25 921 aa12.18□□□□□ -0.46
PTCH1-214ENST00000547615 RREB1Q92766 1687 aa12.18□□□□□ -0.46
PTCH1-214ENST00000547615 R3HDM1Q15032 1099 aaKnown RBP12.17□□□□□ -0.46
PTCH1-214ENST00000547615 PHRF1Q9P1Y6 1649 aaKnown RBP12.16□□□□□ -0.46
PTCH1-214ENST00000547615 RGPD3A6NKT7 1758 aaPredicted RBP12.16□□□□□ -0.46
PTCH1-214ENST00000547615 RGPD4Q7Z3J3 1758 aa12.16□□□□□ -0.46
PTCH1-214ENST00000547615 NGDNQ8NEJ9 315 aaKnown RBP12.16□□□□□ -0.46
PTCH1-214ENST00000547615 PMFBP1Q8TBY8 1022 aa12.16□□□□□ -0.46
PTCH1-214ENST00000547615 ADGRB1O14514 1584 aa12.16□□□□□ -0.46
PTCH1-214ENST00000547615 NINLQ9Y2I6 1382 aa12.16□□□□□ -0.46
PTCH1-214ENST00000547615 SPATA31A1Q5TZJ5 1347 aa12.15□□□□□ -0.46
PTCH1-214ENST00000547615 CFAP70Q5T0N1 1121 aa12.15□□□□□ -0.46
PTCH1-214ENST00000547615 WASLO00401 505 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-214ENST00000547615 PDE3BQ13370 1112 aa12.14□□□□□ -0.47
PTCH1-214ENST00000547615 SAFB2Q14151 953 aaKnown RBP eCLIP12.14□□□□□ -0.47
PTCH1-214ENST00000547615 BARGINQ6ZT62 677 aa12.14□□□□□ -0.47
PTCH1-214ENST00000547615 PPARGC1BQ86YN6 1023 aaKnown RBP12.14□□□□□ -0.47
PTCH1-214ENST00000547615 THRAP3Q9Y2W1 955 aaKnown RBP12.14□□□□□ -0.47
PTCH1-214ENST00000547615 NUP188Q5SRE5 1749 aa12.14□□□□□ -0.47
PTCH1-214ENST00000547615 PAK3O75914 559 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-214ENST00000547615 PLEKHG5O94827 1062 aa12.13□□□□□ -0.47
PTCH1-214ENST00000547615 YY1P25490 414 aa12.13□□□□□ -0.47
PTCH1-214ENST00000547615 CAMKK2Q96RR4 588 aa12.13□□□□□ -0.47
PTCH1-214ENST00000547615 APBA3O96018 575 aa12.12□□□□□ -0.47
PTCH1-214ENST00000547615 EZH2Q15910 746 aaKnown RBP12.12□□□□□ -0.47
PTCH1-214ENST00000547615 PPP1R1BQ9UD71 204 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-214ENST00000547615 KIAA0232Q92628 1395 aa12.12□□□□□ -0.47
PTCH1-214ENST00000547615 PARP4Q9UKK3 1724 aaKnown RBP12.11□□□□□ -0.47
PTCH1-214ENST00000547615 BRD4O60885 1362 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-214ENST00000547615 EVA1CP58658 441 aa12.11□□□□□ -0.47
PTCH1-214ENST00000547615 SPON1Q9HCB6 807 aa12.11□□□□□ -0.47
PTCH1-214ENST00000547615 SSH2Q76I76 1423 aa12.11□□□□□ -0.47
PTCH1-214ENST00000547615 CPDO75976 1380 aa12.1□□□□□ -0.47
PTCH1-214ENST00000547615 TRIM37O94972 964 aa12.1□□□□□ -0.47
PTCH1-214ENST00000547615 ARHGEF28Q8N1W1 1705 aaKnown RBP12.1□□□□□ -0.47
PTCH1-214ENST00000547615 TOPAZ1Q8N9V7 1692 aa12.1□□□□□ -0.47
PTCH1-214ENST00000547615 NRKQ7Z2Y5 1582 aa12.09□□□□□ -0.47
PTCH1-214ENST00000547615 POLR3AO14802 1390 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-214ENST00000547615 TRAK1Q9UPV9 953 aa12.09□□□□□ -0.47
PTCH1-214ENST00000547615 OVOS2A0A0G2JMS6 1433 aa12.09□□□□□ -0.47
PTCH1-214ENST00000547615 OVOS2A0A0J9YW53 1432 aa12.09□□□□□ -0.47
PTCH1-214ENST00000547615 OVOS2Q6IE36 1432 aa12.09□□□□□ -0.47
PTCH1-214ENST00000547615 MINK1Q8N4C8 1332 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-214ENST00000547615 LMO7Q8WWI1 1683 aa12.08□□□□□ -0.48
PTCH1-214ENST00000547615 TCP11L2Q8N4U5 519 aa12.08□□□□□ -0.48
PTCH1-214ENST00000547615 STRN4Q9NRL3 753 aa12.08□□□□□ -0.48
PTCH1-214ENST00000547615 PRR36Q9H6K5 1346 aa12.08□□□□□ -0.48
PTCH1-214ENST00000547615 KCNQ2O43526 872 aa12.07□□□□□ -0.48
PTCH1-214ENST00000547615 HIRIP3Q9BW71 556 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-214ENST00000547615 KIAA1210Q9ULL0 1709 aa12.06□□□□□ -0.48
PTCH1-214ENST00000547615 FAM182BQ5T319 152 aa12.06□□□□□ -0.48
PTCH1-214ENST00000547615 NUDT16Q96DE0 195 aaKnown RBP12.06□□□□□ -0.48
PTCH1-214ENST00000547615 CRB1P82279 1406 aa12.05□□□□□ -0.48
PTCH1-214ENST00000547615 NLRP13Q86W25 1043 aa12.05□□□□□ -0.48
PTCH1-214ENST00000547615 CDCA7Q9BWT1 371 aaPredicted RBP12.05□□□□□ -0.48
PTCH1-214ENST00000547615 CCDC61Q9Y6R9 512 aa12.05□□□□□ -0.48
PTCH1-214ENST00000547615 COL5A2P05997 1499 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-214ENST00000547615 PLSCR1O15162 318 aa12.04□□□□□ -0.48
PTCH1-214ENST00000547615 ABTB2Q8N961 1025 aa12.04□□□□□ -0.48
PTCH1-214ENST00000547615 USP35Q9P2H5 1018 aa12.04□□□□□ -0.48
PTCH1-214ENST00000547615 USP19O94966 1318 aa12.04□□□□□ -0.48
PTCH1-214ENST00000547615 PLEKHG3A1L390 1219 aa12.03□□□□□ -0.48
PTCH1-214ENST00000547615 ZC3H6P61129 1189 aaKnown RBP12.03□□□□□ -0.48
PTCH1-214ENST00000547615 CHRNA2Q15822 529 aa12.03□□□□□ -0.48
PTCH1-214ENST00000547615 CAMTA1Q9Y6Y1 1673 aa12.03□□□□□ -0.48
PTCH1-214ENST00000547615 BCL9O00512 1426 aa12.03□□□□□ -0.48
PTCH1-214ENST00000547615 DCAF11Q8TEB1 546 aa12.02□□□□□ -0.49
PTCH1-214ENST00000547615 ACEP12821 1306 aa12.02□□□□□ -0.49
PTCH1-214ENST00000547615 LRRC37A3O60309 1634 aa12.01□□□□□ -0.49
PTCH1-214ENST00000547615 PEAK1Q9H792 1746 aa12.01□□□□□ -0.49
PTCH1-214ENST00000547615 AKAP12Q02952 1782 aa12.01□□□□□ -0.49
PTCH1-214ENST00000547615 WNK3Q9BYP7 1800 aa12.01□□□□□ -0.49
PTCH1-214ENST00000547615 CASZ1Q86V15 1759 aa12□□□□□ -0.49
PTCH1-214ENST00000547615 DDB1Q16531 1140 aa12□□□□□ -0.49
PTCH1-214ENST00000547615 LARP1Q6PKG0 1096 aaKnown RBP12□□□□□ -0.49
PTCH1-214ENST00000547615 CDK19Q9BWU1 502 aa12□□□□□ -0.49
PTCH1-214ENST00000547615 QRICH2Q9H0J4 1663 aa12□□□□□ -0.49
PTCH1-214ENST00000547615 SBF2Q86WG5 1849 aa12□□□□□ -0.49
PTCH1-214ENST00000547615 BCL11BQ9C0K0 894 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-214ENST00000547615 AATKQ6ZMQ8 1374 aa11.99□□□□□ -0.49
PTCH1-214ENST00000547615 SLIT3O75094 1523 aa11.99□□□□□ -0.49
PTCH1-214ENST00000547615 ABCC6O95255 1503 aa11.99□□□□□ -0.49
PTCH1-214ENST00000547615 PPIP5K1Q6PFW1 1433 aa11.98□□□□□ -0.49
PTCH1-214ENST00000547615 RAB3GAP2Q9H2M9 1393 aa11.98□□□□□ -0.49
PTCH1-214ENST00000547615 GCP02774 474 aa11.98□□□□□ -0.49
PTCH1-214ENST00000547615 KDM2AQ9Y2K7 1162 aa11.98□□□□□ -0.49
PTCH1-214ENST00000547615 TOM1L2Q6ZVM7 507 aa11.96□□□□□ -0.49
PTCH1-214ENST00000547615 STK32BQ9NY57 414 aa11.96□□□□□ -0.49
PTCH1-214ENST00000547615 CHD4Q14839 1912 aa11.96□□□□□ -0.5
PTCH1-214ENST00000547615 WDR17Q8IZU2 1322 aa11.95□□□□□ -0.5
PTCH1-214ENST00000547615 SRPK2P78362 688 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms