RNA–Protein interactions for RNA: ENST00000544596.5

ABCA13-207, Transcript of ATP binding cassette subfamily A member 13, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene ABCA13, Length 7,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-207ENST00000544596 GNL3LQ9NVN8 582 aaKnown RBP9.66□□□□□ -0.86
ABCA13-207ENST00000544596 E9PSI1 815 aa9.66□□□□□ -0.86
ABCA13-207ENST00000544596 ANKRD30AQ9BXX3 1397 aa9.66□□□□□ -0.86
ABCA13-207ENST00000544596 SERPINC1P01008 464 aa9.66□□□□□ -0.86
ABCA13-207ENST00000544596 CA8P35219 290 aa9.66□□□□□ -0.86
ABCA13-207ENST00000544596 FAM43AQ8N2R8 423 aa9.66□□□□□ -0.86
ABCA13-207ENST00000544596 PDE3BQ13370 1112 aa9.66□□□□□ -0.86
ABCA13-207ENST00000544596 APAF1O14727 1248 aa9.65□□□□□ -0.86
ABCA13-207ENST00000544596 USP5P45974 858 aa9.65□□□□□ -0.86
ABCA13-207ENST00000544596 STK38Q15208 465 aa9.65□□□□□ -0.86
ABCA13-207ENST00000544596 CNTROBQ8N137 903 aa9.65□□□□□ -0.86
ABCA13-207ENST00000544596 LUC7LQ9NQ29 371 aaKnown RBP9.65□□□□□ -0.86
ABCA13-207ENST00000544596 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.65□□□□□ -0.86
ABCA13-207ENST00000544596 TTLL12Q14166 644 aaPredicted RBP9.65□□□□□ -0.86
ABCA13-207ENST00000544596 DZIP1LQ8IYY4 767 aaKnown RBP9.65□□□□□ -0.86
ABCA13-207ENST00000544596 ROCK1Q13464 1354 aa9.65□□□□□ -0.86
ABCA13-207ENST00000544596 GOLGA6L10A0A0M3HER8 536 aa9.65□□□□□ -0.86
ABCA13-207ENST00000544596 CYB5RLQ6IPT4 315 aa9.65□□□□□ -0.86
ABCA13-207ENST00000544596 EXOC6Q8TAG9 804 aa9.65□□□□□ -0.86
ABCA13-207ENST00000544596 PUS7Q96PZ0 661 aaKnown RBP9.65□□□□□ -0.86
ABCA13-207ENST00000544596 LRRFIP2Q9Y608 721 aaKnown RBP9.65□□□□□ -0.86
ABCA13-207ENST00000544596 NUCB2P80303 420 aa9.65□□□□□ -0.86
ABCA13-207ENST00000544596 STIM1Q13586 685 aa9.65□□□□□ -0.86
ABCA13-207ENST00000544596 SPC24Q8NBT2 197 aa9.65□□□□□ -0.86
ABCA13-207ENST00000544596 CARMIL2Q6F5E8 1435 aa9.65□□□□□ -0.86
ABCA13-207ENST00000544596 FHAD1B1AJZ9 1412 aa9.65□□□□□ -0.87
ABCA13-207ENST00000544596 NINLQ9Y2I6 1382 aa9.64□□□□□ -0.87
ABCA13-207ENST00000544596 PPFIBP1Q86W92 1011 aa9.64□□□□□ -0.87
ABCA13-207ENST00000544596 DYDC1Q8WWB3 177 aa9.64□□□□□ -0.87
ABCA13-207ENST00000544596 VGFO15240 615 aaPredicted RBP9.64□□□□□ -0.87
ABCA13-207ENST00000544596 STK3Q13188 491 aa9.64□□□□□ -0.87
ABCA13-207ENST00000544596 WDHD1O75717 1129 aaPredicted RBP9.64□□□□□ -0.87
ABCA13-207ENST00000544596 SETD5Q9C0A6 1442 aa9.64□□□□□ -0.87
ABCA13-207ENST00000544596 PIP4K2BP78356 416 aa9.64□□□□□ -0.87
ABCA13-207ENST00000544596 PIP4K2AP48426 406 aaPredicted RBP9.63□□□□□ -0.87
ABCA13-207ENST00000544596 CCDC158Q5M9N0 1113 aa9.63□□□□□ -0.87
ABCA13-207ENST00000544596 BICDL1Q6ZP65 573 aa9.63□□□□□ -0.87
ABCA13-207ENST00000544596 WRNQ14191 1432 aaPredicted RBP eCLIP9.63□□□□□ -0.87
ABCA13-207ENST00000544596 CCDC69A6NI79 296 aa9.63□□□□□ -0.87
ABCA13-207ENST00000544596 SURF6O75683 361 aaKnown RBP9.63□□□□□ -0.87
ABCA13-207ENST00000544596 DDX54Q8TDD1 881 aaKnown RBP9.63□□□□□ -0.87
ABCA13-207ENST00000544596 DRC1Q96MC2 740 aa9.63□□□□□ -0.87
ABCA13-207ENST00000544596 ARHGAP35Q9NRY4 1499 aa9.62□□□□□ -0.87
ABCA13-207ENST00000544596 CCDC113Q9H0I3 377 aa9.62□□□□□ -0.87
ABCA13-207ENST00000544596 INCENPQ9NQS7 918 aa9.62□□□□□ -0.87
ABCA13-207ENST00000544596 BMP2KQ9NSY1 1161 aaPredicted RBP9.62□□□□□ -0.87
ABCA13-207ENST00000544596 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.62□□□□□ -0.87
ABCA13-207ENST00000544596 NFKBIBQ15653 356 aa9.62□□□□□ -0.87
ABCA13-207ENST00000544596 SPINK5Q9NQ38 1064 aaPredicted RBP9.62□□□□□ -0.87
ABCA13-207ENST00000544596 RABEP1Q15276 862 aa9.62□□□□□ -0.87
ABCA13-207ENST00000544596 CEP63Q96MT8 703 aa9.62□□□□□ -0.87
ABCA13-207ENST00000544596 ST20-MTHFSA0A0A6YYL1 179 aa9.61□□□□□ -0.87
ABCA13-207ENST00000544596 CCDC91Q7Z6B0 441 aa9.61□□□□□ -0.87
ABCA13-207ENST00000544596 TRIM22Q8IYM9 498 aa9.61□□□□□ -0.87
ABCA13-207ENST00000544596 CCDC39Q9UFE4 941 aa9.61□□□□□ -0.87
ABCA13-207ENST00000544596 STAMBPO95630 424 aa9.61□□□□□ -0.87
ABCA13-207ENST00000544596 L3MBTL2Q969R5 705 aa9.61□□□□□ -0.87
ABCA13-207ENST00000544596 SIL1Q9H173 461 aa9.61□□□□□ -0.87
ABCA13-207ENST00000544596 FIBPO43427 364 aa9.61□□□□□ -0.87
ABCA13-207ENST00000544596 NLRP6P59044 892 aa9.61□□□□□ -0.87
ABCA13-207ENST00000544596 ZNF396Q96N95 335 aaPredicted RBP9.61□□□□□ -0.87
ABCA13-207ENST00000544596 MPHOSPH8Q99549 860 aa9.61□□□□□ -0.87
ABCA13-207ENST00000544596 POTEJP0CG39 1038 aa9.61□□□□□ -0.87
ABCA13-207ENST00000544596 NACAP1Q9BZK3 213 aa9.61□□□□□ -0.87
ABCA13-207ENST00000544596 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.61□□□□□ -0.87
ABCA13-207ENST00000544596 CCP110O43303 1012 aa9.6□□□□□ -0.87
ABCA13-207ENST00000544596 PHLDB1Q86UU1 1377 aa9.6□□□□□ -0.87
ABCA13-207ENST00000544596 MYBBP1AQ9BQG0 1328 aaKnown RBP9.6□□□□□ -0.87
ABCA13-207ENST00000544596 LIG1P18858 919 aa9.6□□□□□ -0.87
ABCA13-207ENST00000544596 MPNDQ8N594 471 aa9.6□□□□□ -0.87
ABCA13-207ENST00000544596 NASPP49321 788 aaPredicted RBP9.6□□□□□ -0.87
ABCA13-207ENST00000544596 ESCO1Q5FWF5 840 aa9.6□□□□□ -0.87
ABCA13-207ENST00000544596 RSPH4AQ5TD94 716 aa9.6□□□□□ -0.87
ABCA13-207ENST00000544596 DDX23Q9BUQ8 820 aaKnown RBP9.6□□□□□ -0.87
ABCA13-207ENST00000544596 DNAI2Q9GZS0 605 aa9.6□□□□□ -0.87
ABCA13-207ENST00000544596 HOMER2Q9NSB8 354 aa9.6□□□□□ -0.87
ABCA13-207ENST00000544596 CARMIL1Q5VZK9 1371 aa9.6□□□□□ -0.87
ABCA13-207ENST00000544596 KIF15Q9NS87 1388 aa9.6□□□□□ -0.87
ABCA13-207ENST00000544596 GRM1Q13255 1194 aa9.6□□□□□ -0.87
ABCA13-207ENST00000544596 CAVIN1Q6NZI2 390 aaKnown RBP9.6□□□□□ -0.87
ABCA13-207ENST00000544596 CEP164Q9UPV0 1460 aa9.6□□□□□ -0.87
ABCA13-207ENST00000544596 JAKMIP3Q5VZ66 844 aa9.59□□□□□ -0.87
ABCA13-207ENST00000544596 TMOD2Q9NZR1 351 aa9.59□□□□□ -0.87
ABCA13-207ENST00000544596 ME1P48163 572 aa9.59□□□□□ -0.87
ABCA13-207ENST00000544596 TRMT1LQ7Z2T5 733 aaKnown RBP9.59□□□□□ -0.87
ABCA13-207ENST00000544596 MACROD2A1Z1Q3 448 aa9.59□□□□□ -0.87
ABCA13-207ENST00000544596 PPP4R3AQ6IN85 833 aa9.59□□□□□ -0.87
ABCA13-207ENST00000544596 C22orf23Q9BZE7 217 aa9.59□□□□□ -0.87
ABCA13-207ENST00000544596 EPB41L2O43491 1005 aaKnown RBP9.59□□□□□ -0.87
ABCA13-207ENST00000544596 GNAI1P63096 354 aa9.59□□□□□ -0.87
ABCA13-207ENST00000544596 MAP2K1Q02750 393 aaPredicted RBP9.59□□□□□ -0.87
ABCA13-207ENST00000544596 FKBP4Q02790 459 aaKnown RBP eCLIP9.59□□□□□ -0.87
ABCA13-207ENST00000544596 UBE4AQ14139 1066 aa9.59□□□□□ -0.87
ABCA13-207ENST00000544596 ABTB2Q8N961 1025 aa9.59□□□□□ -0.87
ABCA13-207ENST00000544596 CCDC66A2RUB6 948 aa9.59□□□□□ -0.87
ABCA13-207ENST00000544596 PABPN1LA6NDY0 278 aaKnown RBP9.59□□□□□ -0.87
ABCA13-207ENST00000544596 CTNNBL1Q8WYA6 563 aaPredicted RBP9.59□□□□□ -0.87
ABCA13-207ENST00000544596 BCCIPQ9P287 314 aaKnown RBP eCLIP9.59□□□□□ -0.87
ABCA13-207ENST00000544596 MAP4K4O95819 1239 aaPredicted RBP9.58□□□□□ -0.88
ABCA13-207ENST00000544596 RRP1P56182 461 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms