RNA–Protein interactions for RNA: ENST00000544381.3

MDH1-216, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-216ENST00000544381 RIMS2Q9UQ26 1411 aa14.07□□□□□ -0.16
MDH1-216ENST00000544381 ECM2O94769 699 aaPredicted RBP14.06□□□□□ -0.16
MDH1-216ENST00000544381 CARD11Q9BXL7 1154 aa14.06□□□□□ -0.16
MDH1-216ENST00000544381 SLC52A1Q9NWF4 448 aa14.06□□□□□ -0.16
MDH1-216ENST00000544381 ROCK2O75116 1388 aaKnown RBP14.05□□□□□ -0.16
MDH1-216ENST00000544381 SRCAPQ6ZRS2 3230 aa14.05□□□□□ -0.16
MDH1-216ENST00000544381 CABP2Q9NPB3 220 aa14.05□□□□□ -0.16
MDH1-216ENST00000544381 TRPM1Q7Z4N2 1603 aa14.04□□□□□ -0.16
MDH1-216ENST00000544381 NRXN3Q9Y4C0 1643 aa14.04□□□□□ -0.16
MDH1-216ENST00000544381 SCUBE2Q9NQ36 999 aa14.04□□□□□ -0.16
MDH1-216ENST00000544381 USP47Q96K76 1375 aa14.04□□□□□ -0.16
MDH1-216ENST00000544381 PTPRUQ92729 1446 aa14.03□□□□□ -0.16
MDH1-216ENST00000544381 NCOA3Q9Y6Q9 1424 aa14.03□□□□□ -0.16
MDH1-216ENST00000544381 XRN1Q8IZH2 1706 aaKnown RBP14.03□□□□□ -0.16
MDH1-216ENST00000544381 VGFO15240 615 aaPredicted RBP14.02□□□□□ -0.17
MDH1-216ENST00000544381 RPGRIP1LQ68CZ1 1315 aa14.02□□□□□ -0.17
MDH1-216ENST00000544381 UPF1Q92900 1129 aaKnown RBP eCLIP14.01□□□□□ -0.17
MDH1-216ENST00000544381 NHSL1Q5SYE7 1610 aa14.01□□□□□ -0.17
MDH1-216ENST00000544381 DDX10Q13206 875 aaKnown RBP14□□□□□ -0.17
MDH1-216ENST00000544381 TBX22Q9Y458 520 aa14□□□□□ -0.17
MDH1-216ENST00000544381 SPATA31A6Q5VVP1 1343 aa14□□□□□ -0.17
MDH1-216ENST00000544381 MYOM2P54296 1465 aa14□□□□□ -0.17
MDH1-216ENST00000544381 IFT172Q9UG01 1749 aa14□□□□□ -0.17
MDH1-216ENST00000544381 NBPF1Q3BBV0 1214 aa13.99□□□□□ -0.17
MDH1-216ENST00000544381 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.99□□□□□ -0.176e-10■■□□□ 12.5
MDH1-216ENST00000544381 LAMC1P11047 1609 aa13.98□□□□□ -0.17
MDH1-216ENST00000544381 GPRASP1Q5JY77 1395 aa13.98□□□□□ -0.17
MDH1-216ENST00000544381 PLSCR2Q9NRY7 297 aa13.98□□□□□ -0.17
MDH1-216ENST00000544381 TAOK2Q9UL54 1235 aa13.98□□□□□ -0.17
MDH1-216ENST00000544381 PPLO60437 1756 aa13.98□□□□□ -0.17
MDH1-216ENST00000544381 ASXL1Q8IXJ9 1541 aa13.97□□□□□ -0.17
MDH1-216ENST00000544381 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.97□□□□□ -0.17
MDH1-216ENST00000544381 ZFP91Q96JP5 570 aaPredicted RBP13.97□□□□□ -0.17
MDH1-216ENST00000544381 CDK12Q9NYV4 1490 aaPredicted RBP13.97□□□□□ -0.17
MDH1-216ENST00000544381 PIK3R4Q99570 1358 aa13.96□□□□□ -0.17
MDH1-216ENST00000544381 ADGRF5Q8IZF2 1346 aa13.96□□□□□ -0.17
MDH1-216ENST00000544381 NUTM2DQ5VT03 806 aaPredicted RBP13.96□□□□□ -0.17
MDH1-216ENST00000544381 KIAA1210Q9ULL0 1709 aa13.96□□□□□ -0.17
MDH1-216ENST00000544381 BRINP3Q76B58 766 aa13.95□□□□□ -0.18
MDH1-216ENST00000544381 PDCD7Q8N8D1 485 aaKnown RBP13.95□□□□□ -0.18
MDH1-216ENST00000544381 BCANQ96GW7 911 aa13.95□□□□□ -0.18
MDH1-216ENST00000544381 SETBP1Q9Y6X0 1596 aa13.95□□□□□ -0.18
MDH1-216ENST00000544381 MST1RQ04912 1400 aa13.95□□□□□ -0.18
MDH1-216ENST00000544381 NALCNQ8IZF0 1738 aa13.95□□□□□ -0.18
MDH1-216ENST00000544381 WASHC2AQ641Q2 1341 aa13.94□□□□□ -0.18
MDH1-216ENST00000544381 ST20-MTHFSA0A0A6YYL1 179 aa13.94□□□□□ -0.18
MDH1-216ENST00000544381 NRXN1Q9ULB1 1477 aa13.94□□□□□ -0.18
MDH1-216ENST00000544381 DCCP43146 1447 aa13.94□□□□□ -0.18
MDH1-216ENST00000544381 CCDC7Q96M83 1385 aa13.94□□□□□ -0.18
MDH1-216ENST00000544381 C19orf44Q9H6X5 657 aa13.93□□□□□ -0.18
MDH1-216ENST00000544381 RGS12O14924 1447 aa13.93□□□□□ -0.18
MDH1-216ENST00000544381 C11orf95C9JLR9 678 aaPredicted RBP13.92□□□□□ -0.18
MDH1-216ENST00000544381 CFAP70Q5T0N1 1121 aa13.92□□□□□ -0.18
MDH1-216ENST00000544381 ZNF772Q68DY9 489 aaPredicted RBP13.92□□□□□ -0.18
MDH1-216ENST00000544381 CADPS2Q86UW7 1296 aa13.92□□□□□ -0.18
MDH1-216ENST00000544381 EP400Q96L91 3159 aa13.92□□□□□ -0.18
MDH1-216ENST00000544381 NEXMIFQ5QGS0 1516 aa13.92□□□□□ -0.18
MDH1-216ENST00000544381 RGL2O15211 777 aa13.91□□□□□ -0.18
MDH1-216ENST00000544381 EFCAB3Q8N7B9 438 aa13.91□□□□□ -0.18
MDH1-216ENST00000544381 KIF7Q2M1P5 1343 aa13.91□□□□□ -0.18
MDH1-216ENST00000544381 PIK3C2GO75747 1445 aa13.9□□□□□ -0.18
MDH1-216ENST00000544381 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.9□□□□□ -0.19
MDH1-216ENST00000544381 POLR3GLQ9BT43 218 aa13.9□□□□□ -0.19
MDH1-216ENST00000544381 C14orf93Q9H972 538 aaKnown RBP13.9□□□□□ -0.19
MDH1-216ENST00000544381 AMOTL2Q9Y2J4 779 aa13.9□□□□□ -0.19
MDH1-216ENST00000544381 EIF3AQ14152 1382 aaKnown RBP13.89□□□□□ -0.19
MDH1-216ENST00000544381 AFF2P51816 1311 aa13.89□□□□□ -0.19
MDH1-216ENST00000544381 MEX3CQ5U5Q3 659 aaKnown RBP13.89□□□□□ -0.19
MDH1-216ENST00000544381 METP08581 1390 aa13.88□□□□□ -0.19
MDH1-216ENST00000544381 PNPLA6Q8IY17 1366 aa13.88□□□□□ -0.19
MDH1-216ENST00000544381 ATF3P18847 181 aa13.88□□□□□ -0.19
MDH1-216ENST00000544381 RXRBP28702 533 aa13.88□□□□□ -0.19
MDH1-216ENST00000544381 C14orf37Q86TY3 774 aa13.88□□□□□ -0.19
MDH1-216ENST00000544381 L3MBTL3Q96JM7 780 aaPredicted RBP13.88□□□□□ -0.19
MDH1-216ENST00000544381 ADGRL3Q9HAR2 1447 aa13.87□□□□□ -0.19
MDH1-216ENST00000544381 NUTM2BA6NNL0 878 aaPredicted RBP13.87□□□□□ -0.19
MDH1-216ENST00000544381 NUTM2EB1AL46 878 aaPredicted RBP13.87□□□□□ -0.19
MDH1-216ENST00000544381 HDGFP51858 240 aaKnown RBP13.87□□□□□ -0.19
MDH1-216ENST00000544381 NUTM2AQ8IVF1 878 aaPredicted RBP13.87□□□□□ -0.19
MDH1-216ENST00000544381 DDX17Q92841 729 aaKnown RBP13.87□□□□□ -0.19
MDH1-216ENST00000544381 BCL11BQ9C0K0 894 aaPredicted RBP13.87□□□□□ -0.19
MDH1-216ENST00000544381 ANP32CO43423 234 aa13.86□□□□□ -0.19
MDH1-216ENST00000544381 TMF1P82094 1093 aa13.85□□□□□ -0.19
MDH1-216ENST00000544381 STK25O00506 426 aa13.84□□□□□ -0.19
MDH1-216ENST00000544381 SLC24A1O60721 1099 aa13.84□□□□□ -0.19
MDH1-216ENST00000544381 DPY19L2Q6NUT2 758 aa13.84□□□□□ -0.19
MDH1-216ENST00000544381 TESK2Q96S53 571 aa13.84□□□□□ -0.19
MDH1-216ENST00000544381 STK24Q9Y6E0 443 aa13.84□□□□□ -0.19
MDH1-216ENST00000544381 SOX12O15370 315 aa13.83□□□□□ -0.2
MDH1-216ENST00000544381 SLAIN1Q8ND83 568 aa13.83□□□□□ -0.2
MDH1-216ENST00000544381 TMEM132EQ6IEE7 984 aa13.82□□□□□ -0.2
MDH1-216ENST00000544381 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.82□□□□□ -0.2
MDH1-216ENST00000544381 COL22A1Q8NFW1 1626 aaPredicted RBP13.82□□□□□ -0.2
MDH1-216ENST00000544381 C1orf167Q5SNV9 1468 aa13.82□□□□□ -0.2
MDH1-216ENST00000544381 ADGRB1O14514 1584 aa13.81□□□□□ -0.2
MDH1-216ENST00000544381 CDCA8Q53HL2 280 aa13.81□□□□□ -0.2
MDH1-216ENST00000544381 TRAK1Q9UPV9 953 aa13.81□□□□□ -0.2
MDH1-216ENST00000544381 G3V3G9 751 aa13.79□□□□□ -0.2
MDH1-216ENST00000544381 RBM6P78332 1123 aaKnown RBP13.79□□□□□ -0.2
MDH1-216ENST00000544381 C3orf67Q6ZVT6 689 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms