RNA–Protein interactions for RNA: ENST00000544004.1

AP000439.1-201, humanhuman

TSL 4 BASIC

Gene AP000439.1, Length 581 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.1-201ENST00000544004 RREB1Q92766 1687 aa16.98■□□□□ 0.31
AP000439.1-201ENST00000544004 PARD3Q8TEW0 1356 aa16.98■□□□□ 0.31
AP000439.1-201ENST00000544004 NUP188Q5SRE5 1749 aa16.97■□□□□ 0.31
AP000439.1-201ENST00000544004 CRYBG1Q9Y4K1 1723 aa16.97■□□□□ 0.31
AP000439.1-201ENST00000544004 PRAM1Q96QH2 718 aa16.97■□□□□ 0.31
AP000439.1-201ENST00000544004 ANKARQ7Z5J8 1434 aa16.96■□□□□ 0.31
AP000439.1-201ENST00000544004 C14orf93Q9H972 538 aaKnown RBP16.96■□□□□ 0.31
AP000439.1-201ENST00000544004 DHX57Q6P158 1386 aaKnown RBP16.96■□□□□ 0.31
AP000439.1-201ENST00000544004 SPATA31A1Q5TZJ5 1347 aa16.96■□□□□ 0.3
AP000439.1-201ENST00000544004 GPRASP1Q5JY77 1395 aa16.95■□□□□ 0.3
AP000439.1-201ENST00000544004 DCAF8L1A6NGE4 600 aa16.95■□□□□ 0.3
AP000439.1-201ENST00000544004 PRDM11Q9NQV5 511 aa16.95■□□□□ 0.3
AP000439.1-201ENST00000544004 PPP1R1BQ9UD71 204 aaPredicted RBP16.95■□□□□ 0.3
AP000439.1-201ENST00000544004 NBPF8Q3BBV2 869 aa16.94■□□□□ 0.3
AP000439.1-201ENST00000544004 CFAP70Q5T0N1 1121 aa16.94■□□□□ 0.3
AP000439.1-201ENST00000544004 NBPF14Q5TI25 921 aa16.94■□□□□ 0.3
AP000439.1-201ENST00000544004 POGKQ9P215 609 aa16.93■□□□□ 0.3
AP000439.1-201ENST00000544004 ACIN1Q9UKV3 1341 aaKnown RBP16.93■□□□□ 0.3
AP000439.1-201ENST00000544004 SPON1Q9HCB6 807 aa16.92■□□□□ 0.3
AP000439.1-201ENST00000544004 KCNQ2O43526 872 aa16.91■□□□□ 0.3
AP000439.1-201ENST00000544004 PAK3O75914 559 aaPredicted RBP16.91■□□□□ 0.3
AP000439.1-201ENST00000544004 STRN4Q9NRL3 753 aa16.91■□□□□ 0.3
AP000439.1-201ENST00000544004 PDE3BQ13370 1112 aa16.9■□□□□ 0.3
AP000439.1-201ENST00000544004 CHRNA2Q15822 529 aa16.9■□□□□ 0.3
AP000439.1-201ENST00000544004 HIRIP3Q9BW71 556 aaPredicted RBP16.9■□□□□ 0.3
AP000439.1-201ENST00000544004 USP35Q9P2H5 1018 aa16.9■□□□□ 0.3
AP000439.1-201ENST00000544004 CAMTA1Q9Y6Y1 1673 aa16.9■□□□□ 0.3
AP000439.1-201ENST00000544004 PRR36Q9H6K5 1346 aa16.9■□□□□ 0.3
AP000439.1-201ENST00000544004 DLC1Q96QB1 1528 aa16.9■□□□□ 0.3
AP000439.1-201ENST00000544004 KIAA0232Q92628 1395 aa16.89■□□□□ 0.3
AP000439.1-201ENST00000544004 NINLQ9Y2I6 1382 aa16.89■□□□□ 0.3
AP000439.1-201ENST00000544004 NGDNQ8NEJ9 315 aaKnown RBP16.88■□□□□ 0.29
AP000439.1-201ENST00000544004 PHRF1Q9P1Y6 1649 aaKnown RBP16.87■□□□□ 0.29
AP000439.1-201ENST00000544004 TULP4Q9NRJ4 1543 aa16.86■□□□□ 0.29
AP000439.1-201ENST00000544004 ZC3H6P61129 1189 aaKnown RBP16.86■□□□□ 0.29
AP000439.1-201ENST00000544004 BARGINQ6ZT62 677 aa16.86■□□□□ 0.29
AP000439.1-201ENST00000544004 MPHOSPH9Q99550 1183 aa16.86■□□□□ 0.29
AP000439.1-201ENST00000544004 MINK1Q8N4C8 1332 aaPredicted RBP16.86■□□□□ 0.29
AP000439.1-201ENST00000544004 EIF3AQ14152 1382 aaKnown RBP16.86■□□□□ 0.29
AP000439.1-201ENST00000544004 EVA1CP58658 441 aa16.85■□□□□ 0.29
AP000439.1-201ENST00000544004 TRAK1Q9UPV9 953 aa16.84■□□□□ 0.29
AP000439.1-201ENST00000544004 WASLO00401 505 aaPredicted RBP16.83■□□□□ 0.28
AP000439.1-201ENST00000544004 SSH2Q76I76 1423 aa16.83■□□□□ 0.28
AP000439.1-201ENST00000544004 NUTM2GQ5VZR2 741 aa16.81■□□□□ 0.28
AP000439.1-201ENST00000544004 LARP1Q6PKG0 1096 aaKnown RBP16.81■□□□□ 0.28
AP000439.1-201ENST00000544004 TCP11L2Q8N4U5 519 aa16.81■□□□□ 0.28
AP000439.1-201ENST00000544004 ZNF784Q8NCA9 323 aaPredicted RBP16.81■□□□□ 0.28
AP000439.1-201ENST00000544004 ITSN1Q15811 1721 aa16.81■□□□□ 0.28
AP000439.1-201ENST00000544004 ADGRB1O14514 1584 aa16.81■□□□□ 0.28
AP000439.1-201ENST00000544004 NRKQ7Z2Y5 1582 aa16.81■□□□□ 0.28
AP000439.1-201ENST00000544004 CASZ1Q86V15 1759 aa16.79■□□□□ 0.28
AP000439.1-201ENST00000544004 ATP7BP35670 1465 aa16.79■□□□□ 0.28
AP000439.1-201ENST00000544004 PARP4Q9UKK3 1724 aaKnown RBP16.79■□□□□ 0.28
AP000439.1-201ENST00000544004 RGPD3A6NKT7 1758 aaPredicted RBP16.78■□□□□ 0.28
AP000439.1-201ENST00000544004 RGPD4Q7Z3J3 1758 aa16.78■□□□□ 0.28
AP000439.1-201ENST00000544004 UTRNP46939 3433 aa16.77■□□□□ 0.28
AP000439.1-201ENST00000544004 SBF2Q86WG5 1849 aa16.77■□□□□ 0.28
AP000439.1-201ENST00000544004 SENP3-EIF4A1A0A087X0R7 540 aa16.77■□□□□ 0.28
AP000439.1-201ENST00000544004 THRAP3Q9Y2W1 955 aaKnown RBP16.77■□□□□ 0.28
AP000439.1-201ENST00000544004 MYOM1P52179 1685 aa16.77■□□□□ 0.28
AP000439.1-201ENST00000544004 LMO7Q8WWI1 1683 aa16.77■□□□□ 0.28
AP000439.1-201ENST00000544004 NUDT16Q96DE0 195 aaKnown RBP16.76■□□□□ 0.27
AP000439.1-201ENST00000544004 PDGFDQ9GZP0 370 aaPredicted RBP16.76■□□□□ 0.27
AP000439.1-201ENST00000544004 ANO8Q9HCE9 1232 aaPredicted RBP16.76■□□□□ 0.27
AP000439.1-201ENST00000544004 C11orf95C9JLR9 678 aaPredicted RBP16.75■□□□□ 0.27
AP000439.1-201ENST00000544004 PLSCR1O15162 318 aa16.75■□□□□ 0.27
AP000439.1-201ENST00000544004 PEAK1Q9H792 1746 aa16.75■□□□□ 0.27
AP000439.1-201ENST00000544004 OVOS2A0A0G2JMS6 1433 aa16.74■□□□□ 0.27
AP000439.1-201ENST00000544004 OVOS2A0A0J9YW53 1432 aa16.74■□□□□ 0.27
AP000439.1-201ENST00000544004 OVOS2Q6IE36 1432 aa16.74■□□□□ 0.27
AP000439.1-201ENST00000544004 ZBTB7AO95365 584 aa16.74■□□□□ 0.27
AP000439.1-201ENST00000544004 CHD4Q14839 1912 aa16.74■□□□□ 0.27
AP000439.1-201ENST00000544004 PTGER2P43116 358 aa16.72■□□□□ 0.27
AP000439.1-201ENST00000544004 C1QTNF8P60827 252 aa16.72■□□□□ 0.27
AP000439.1-201ENST00000544004 ABTB2Q8N961 1025 aa16.72■□□□□ 0.27
AP000439.1-201ENST00000544004 ATF5Q9Y2D1 282 aaPredicted RBP16.72■□□□□ 0.27
AP000439.1-201ENST00000544004 CPDO75976 1380 aa16.72■□□□□ 0.27
AP000439.1-201ENST00000544004 ACEP12821 1306 aa16.71■□□□□ 0.27
AP000439.1-201ENST00000544004 BCL11BQ9C0K0 894 aaPredicted RBP16.71■□□□□ 0.27
AP000439.1-201ENST00000544004 COL5A2P05997 1499 aaPredicted RBP16.71■□□□□ 0.27
AP000439.1-201ENST00000544004 LRRC37A3O60309 1634 aa16.7■□□□□ 0.26
AP000439.1-201ENST00000544004 ARHGEF28Q8N1W1 1705 aaKnown RBP16.7■□□□□ 0.26
AP000439.1-201ENST00000544004 POLR3AO14802 1390 aaPredicted RBP16.7■□□□□ 0.26
AP000439.1-201ENST00000544004 IFFO2Q5TF58 517 aa16.7■□□□□ 0.26
AP000439.1-201ENST00000544004 PTF1AQ7RTS3 328 aa16.7■□□□□ 0.26
AP000439.1-201ENST00000544004 SYT17Q9BSW7 474 aa16.7■□□□□ 0.26
AP000439.1-201ENST00000544004 TOPAZ1Q8N9V7 1692 aa16.69■□□□□ 0.26
AP000439.1-201ENST00000544004 PROM2Q8N271 834 aa16.69■□□□□ 0.26
AP000439.1-201ENST00000544004 FHDC1Q9C0D6 1143 aaPredicted RBP16.69■□□□□ 0.26
AP000439.1-201ENST00000544004 KDM2AQ9Y2K7 1162 aa16.69■□□□□ 0.26
AP000439.1-201ENST00000544004 CRB1P82279 1406 aa16.69■□□□□ 0.26
AP000439.1-201ENST00000544004 DDB1Q16531 1140 aa16.68■□□□□ 0.26
AP000439.1-201ENST00000544004 CDK19Q9BWU1 502 aa16.68■□□□□ 0.26
AP000439.1-201ENST00000544004 USP19O94966 1318 aa16.68■□□□□ 0.26
AP000439.1-201ENST00000544004 GCP02774 474 aa16.67■□□□□ 0.26
AP000439.1-201ENST00000544004 CCDC61Q9Y6R9 512 aa16.67■□□□□ 0.26
AP000439.1-201ENST00000544004 NLRP13Q86W25 1043 aa16.66■□□□□ 0.26
AP000439.1-201ENST00000544004 AKAP12Q02952 1782 aa16.65■□□□□ 0.26
AP000439.1-201ENST00000544004 PLEKHG3A1L390 1219 aa16.65■□□□□ 0.26
AP000439.1-201ENST00000544004 ZBTB7CA1YPR0 619 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms