RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 PHLDB1Q86UU1 1377 aa11.94□□□□□ -0.5
TRERF1-205ENST00000541110 SSBP05455 408 aaKnown RBP eCLIP11.94□□□□□ -0.5
TRERF1-205ENST00000541110 CCDC158Q5M9N0 1113 aa11.94□□□□□ -0.5
TRERF1-205ENST00000541110 PIBF1Q8WXW3 757 aa11.94□□□□□ -0.5
TRERF1-205ENST00000541110 KIF15Q9NS87 1388 aa11.94□□□□□ -0.5
TRERF1-205ENST00000541110 CCDC69A6NI79 296 aa11.94□□□□□ -0.5
TRERF1-205ENST00000541110 TOM1L2Q6ZVM7 507 aa11.93□□□□□ -0.5
TRERF1-205ENST00000541110 CCDC144AA2RUR9 1427 aa11.93□□□□□ -0.5
TRERF1-205ENST00000541110 MPHOSPH8Q99549 860 aa11.93□□□□□ -0.5
TRERF1-205ENST00000541110 CENPQQ7L2Z9 268 aaPredicted RBP11.93□□□□□ -0.5
TRERF1-205ENST00000541110 RSPH4AQ5TD94 716 aa11.93□□□□□ -0.5
TRERF1-205ENST00000541110 NLRP13Q86W25 1043 aa11.93□□□□□ -0.5
TRERF1-205ENST00000541110 NUP133Q8WUM0 1156 aa11.93□□□□□ -0.5
TRERF1-205ENST00000541110 GPRASP1Q5JY77 1395 aa11.93□□□□□ -0.5
TRERF1-205ENST00000541110 CABP4P57796 275 aa11.93□□□□□ -0.5
TRERF1-205ENST00000541110 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.93□□□□□ -0.5
TRERF1-205ENST00000541110 E9PSI1 815 aa11.92□□□□□ -0.5
TRERF1-205ENST00000541110 STIM1Q13586 685 aa11.92□□□□□ -0.5
TRERF1-205ENST00000541110 SPINK5Q9NQ38 1064 aaPredicted RBP11.92□□□□□ -0.5
TRERF1-205ENST00000541110 FAM13BQ9NYF5 915 aa11.92□□□□□ -0.5
TRERF1-205ENST00000541110 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.92□□□□□ -0.5
TRERF1-205ENST00000541110 TTC16Q8NEE8 873 aa11.92□□□□□ -0.5
TRERF1-205ENST00000541110 DDX19BQ9UMR2 479 aa11.92□□□□□ -0.5
TRERF1-205ENST00000541110 HOMER2Q9NSB8 354 aa11.92□□□□□ -0.5
TRERF1-205ENST00000541110 HSP90AB3PQ58FF7 597 aa11.92□□□□□ -0.5
TRERF1-205ENST00000541110 CT47B1P0C2W7 299 aaPredicted RBP11.92□□□□□ -0.5
TRERF1-205ENST00000541110 CCDC112Q8NEF3 446 aa11.92□□□□□ -0.5
TRERF1-205ENST00000541110 COMMD10Q9Y6G5 202 aa11.92□□□□□ -0.5
TRERF1-205ENST00000541110 CLASRPQ8N2M8 674 aaKnown RBP11.92□□□□□ -0.5
TRERF1-205ENST00000541110 PPP4R3AQ6IN85 833 aa11.91□□□□□ -0.5
TRERF1-205ENST00000541110 TMOD2Q9NZR1 351 aa11.91□□□□□ -0.5
TRERF1-205ENST00000541110 MYL6BP14649 208 aa11.91□□□□□ -0.5
TRERF1-205ENST00000541110 LUC7LQ9NQ29 371 aaKnown RBP11.91□□□□□ -0.5
TRERF1-205ENST00000541110 CCDC18Q5T9S5 1454 aa11.9□□□□□ -0.5
TRERF1-205ENST00000541110 NLRP6P59044 892 aa11.9□□□□□ -0.5
TRERF1-205ENST00000541110 API5Q9BZZ5 524 aaKnown RBP11.9□□□□□ -0.5
TRERF1-205ENST00000541110 KINO60870 393 aaKnown RBP11.9□□□□□ -0.5
TRERF1-205ENST00000541110 CRBNQ96SW2 442 aa11.9□□□□□ -0.5
TRERF1-205ENST00000541110 SOGA1O94964 1423 aa11.9□□□□□ -0.5
TRERF1-205ENST00000541110 PDS5BQ9NTI5 1447 aa11.89□□□□□ -0.51
TRERF1-205ENST00000541110 PROSER2Q86WR7 435 aaPredicted RBP11.89□□□□□ -0.51
TRERF1-205ENST00000541110 TNIP1Q15025 636 aa11.89□□□□□ -0.51
TRERF1-205ENST00000541110 C16orf71Q8IYS4 520 aaPredicted RBP11.89□□□□□ -0.51
TRERF1-205ENST00000541110 POTEJP0CG39 1038 aa11.89□□□□□ -0.51
TRERF1-205ENST00000541110 TNIKQ9UKE5 1360 aa11.88□□□□□ -0.51
TRERF1-205ENST00000541110 NACAP1Q9BZK3 213 aa11.88□□□□□ -0.51
TRERF1-205ENST00000541110 SIL1Q9H173 461 aa11.88□□□□□ -0.51
TRERF1-205ENST00000541110 CWC15Q9P013 229 aaKnown RBP11.88□□□□□ -0.51
TRERF1-205ENST00000541110 TATP17735 454 aaPredicted RBP11.88□□□□□ -0.51
TRERF1-205ENST00000541110 NF2P35240 595 aa11.88□□□□□ -0.51
TRERF1-205ENST00000541110 FKBP4Q02790 459 aaKnown RBP eCLIP11.88□□□□□ -0.51
TRERF1-205ENST00000541110 DZIP1LQ8IYY4 767 aaKnown RBP11.87□□□□□ -0.51
TRERF1-205ENST00000541110 LNPKQ9C0E8 428 aa11.87□□□□□ -0.51
TRERF1-205ENST00000541110 MYBBP1AQ9BQG0 1328 aaKnown RBP11.87□□□□□ -0.51
TRERF1-205ENST00000541110 SERPINC1P01008 464 aa11.87□□□□□ -0.51
TRERF1-205ENST00000541110 STK3Q13188 491 aa11.87□□□□□ -0.51
TRERF1-205ENST00000541110 TRIM5Q9C035 493 aa11.87□□□□□ -0.51
TRERF1-205ENST00000541110 MRPS9P82933 396 aaKnown RBP11.87□□□□□ -0.51
TRERF1-205ENST00000541110 CCDC30Q5VVM6 783 aa11.87□□□□□ -0.51
TRERF1-205ENST00000541110 VTI1AQ96AJ9 217 aa11.87□□□□□ -0.51
TRERF1-205ENST00000541110 FAM193AP78312 1265 aa11.87□□□□□ -0.51
TRERF1-205ENST00000541110 CCDC57Q2TAC2 916 aa11.87□□□□□ -0.51
TRERF1-205ENST00000541110 TRIM22Q8IYM9 498 aa11.87□□□□□ -0.51
TRERF1-205ENST00000541110 BMP2KQ9NSY1 1161 aaPredicted RBP11.86□□□□□ -0.51
TRERF1-205ENST00000541110 ZNF219Q9P2Y4 722 aaPredicted RBP11.86□□□□□ -0.51
TRERF1-205ENST00000541110 PLEKHO1Q53GL0 409 aaPredicted RBP11.86□□□□□ -0.51
TRERF1-205ENST00000541110 MAP3K9P80192 1104 aa11.86□□□□□ -0.51
TRERF1-205ENST00000541110 PPFIBP1Q86W92 1011 aa11.86□□□□□ -0.51
TRERF1-205ENST00000541110 CCDC150Q8NCX0 1101 aa11.86□□□□□ -0.51
TRERF1-205ENST00000541110 TDO2P48775 406 aa11.86□□□□□ -0.51
TRERF1-205ENST00000541110 ZNF396Q96N95 335 aaPredicted RBP11.86□□□□□ -0.51
TRERF1-205ENST00000541110 MIA2Q96PC5 1412 aa11.86□□□□□ -0.51
TRERF1-205ENST00000541110 NFKBIBQ15653 356 aa11.86□□□□□ -0.51
TRERF1-205ENST00000541110 CCDC91Q7Z6B0 441 aa11.86□□□□□ -0.51
TRERF1-205ENST00000541110 CRACR2BQ8N4Y2 399 aaPredicted RBP11.86□□□□□ -0.51
TRERF1-205ENST00000541110 ST20-MTHFSA0A0A6YYL1 179 aa11.85□□□□□ -0.51
TRERF1-205ENST00000541110 PABPN1LA6NDY0 278 aaKnown RBP11.85□□□□□ -0.51
TRERF1-205ENST00000541110 PIP4K2AP48426 406 aaPredicted RBP11.85□□□□□ -0.51
TRERF1-205ENST00000541110 PUS7Q96PZ0 661 aaKnown RBP11.85□□□□□ -0.51
TRERF1-205ENST00000541110 FMN1Q68DA7 1419 aa11.85□□□□□ -0.51
TRERF1-205ENST00000541110 GOLGA6L7A0A1B0GV03 622 aa11.85□□□□□ -0.51
TRERF1-205ENST00000541110 APAF1O14727 1248 aa11.85□□□□□ -0.51
TRERF1-205ENST00000541110 SURF6O75683 361 aaKnown RBP11.85□□□□□ -0.51
TRERF1-205ENST00000541110 LIG1P18858 919 aa11.85□□□□□ -0.51
TRERF1-205ENST00000541110 FAM177A1Q8N128 213 aaPredicted RBP11.85□□□□□ -0.51
TRERF1-205ENST00000541110 MAP4K4O95819 1239 aaPredicted RBP11.85□□□□□ -0.51
TRERF1-205ENST00000541110 STAMBPO95630 424 aa11.85□□□□□ -0.51
TRERF1-205ENST00000541110 STK38Q15208 465 aa11.85□□□□□ -0.51
TRERF1-205ENST00000541110 LEKR1Q6ZMV7 388 aa11.85□□□□□ -0.51
TRERF1-205ENST00000541110 ZPR1O75312 459 aa11.84□□□□□ -0.51
TRERF1-205ENST00000541110 ANKIB1Q9P2G1 1089 aa11.84□□□□□ -0.51
TRERF1-205ENST00000541110 GOLGA6L10A0A0M3HER8 536 aa11.84□□□□□ -0.51
TRERF1-205ENST00000541110 GNAI1P63096 354 aa11.84□□□□□ -0.51
TRERF1-205ENST00000541110 OSCARQ8IYS5 282 aa11.84□□□□□ -0.51
TRERF1-205ENST00000541110 LRRFIP2Q9Y608 721 aaKnown RBP11.84□□□□□ -0.51
TRERF1-205ENST00000541110 HIP1O00291 1037 aa11.84□□□□□ -0.51
TRERF1-205ENST00000541110 NUCB2P80303 420 aa11.84□□□□□ -0.51
TRERF1-205ENST00000541110 RAI14Q9P0K7 980 aa11.84□□□□□ -0.51
TRERF1-205ENST00000541110 TAF3Q5VWG9 929 aa11.84□□□□□ -0.51
TRERF1-205ENST00000541110 TXLNBQ8N3L3 684 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms