RNA–Protein interactions for RNA: ENST00000540250.1

LINC00943-206, long intergenic non-protein coding RNA 943, humanhuman

TSL 4

Gene LINC00943, Length 1,190 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-206ENST00000540250 WDR62O43379 1518 aa12.61□□□□□ -0.39
LINC00943-206ENST00000540250 ABCA10Q8WWZ4 1543 aa12.61□□□□□ -0.39
LINC00943-206ENST00000540250 ERCC6Q03468 1493 aa12.6□□□□□ -0.39
LINC00943-206ENST00000540250 GOLGA3Q08378 1498 aa12.6□□□□□ -0.39
LINC00943-206ENST00000540250 WNT7BP56706 349 aa12.6□□□□□ -0.39
LINC00943-206ENST00000540250 SYMPKQ92797 1274 aaKnown RBP12.6□□□□□ -0.39
LINC00943-206ENST00000540250 SENP2Q9HC62 589 aa12.6□□□□□ -0.39
LINC00943-206ENST00000540250 THOC2Q8NI27 1593 aaKnown RBP12.6□□□□□ -0.39
LINC00943-206ENST00000540250 WIPF1O43516 503 aa12.59□□□□□ -0.39
LINC00943-206ENST00000540250 JUNDP17535 347 aa12.59□□□□□ -0.39
LINC00943-206ENST00000540250 MINK1Q8N4C8 1332 aaPredicted RBP12.59□□□□□ -0.39
LINC00943-206ENST00000540250 RAD54L2Q9Y4B4 1467 aa12.59□□□□□ -0.39
LINC00943-206ENST00000540250 CCDC102AQ96A19 550 aa12.58□□□□□ -0.4
LINC00943-206ENST00000540250 ERICH3Q5RHP9 1530 aa12.57□□□□□ -0.4
LINC00943-206ENST00000540250 TARBP1Q13395 1621 aaKnown RBP12.56□□□□□ -0.4
LINC00943-206ENST00000540250 TERTO14746 1132 aaKnown RBP12.56□□□□□ -0.4
LINC00943-206ENST00000540250 ALDH1A1P00352 501 aa12.55□□□□□ -0.4
LINC00943-206ENST00000540250 FAM217BQ9NTX9 383 aaPredicted RBP12.55□□□□□ -0.4
LINC00943-206ENST00000540250 ABCA5Q8WWZ7 1642 aa12.55□□□□□ -0.4
LINC00943-206ENST00000540250 PRXQ9BXM0 1461 aa12.54□□□□□ -0.4
LINC00943-206ENST00000540250 PTCRAQ6ISU1 281 aaPredicted RBP12.54□□□□□ -0.4
LINC00943-206ENST00000540250 GPCPD1Q9NPB8 672 aa12.54□□□□□ -0.4
LINC00943-206ENST00000540250 STK17AQ9UEE5 414 aa12.54□□□□□ -0.4
LINC00943-206ENST00000540250 INSM1Q01101 510 aaPredicted RBP12.53□□□□□ -0.4
LINC00943-206ENST00000540250 KIFC2Q96AC6 838 aa12.53□□□□□ -0.4
LINC00943-206ENST00000540250 TNIKQ9UKE5 1360 aa12.53□□□□□ -0.4
LINC00943-206ENST00000540250 RAPGEF2Q9Y4G8 1499 aa12.53□□□□□ -0.4
LINC00943-206ENST00000540250 TULP1O00294 542 aaPredicted RBP12.52□□□□□ -0.41
LINC00943-206ENST00000540250 CLCN1P35523 988 aa12.52□□□□□ -0.41
LINC00943-206ENST00000540250 RETREG3Q86VR2 466 aa12.52□□□□□ -0.41
LINC00943-206ENST00000540250 NUDT12Q9BQG2 462 aa12.52□□□□□ -0.41
LINC00943-206ENST00000540250 SIAH2O43255 324 aa12.51□□□□□ -0.41
LINC00943-206ENST00000540250 CUL7Q14999 1698 aa12.51□□□□□ -0.41
LINC00943-206ENST00000540250 NUTM1Q86Y26 1132 aa12.5□□□□□ -0.41
LINC00943-206ENST00000540250 IFT140Q96RY7 1462 aa12.49□□□□□ -0.41
LINC00943-206ENST00000540250 IGF1RP08069 1367 aa12.49□□□□□ -0.41
LINC00943-206ENST00000540250 EHBP1Q8NDI1 1231 aa12.49□□□□□ -0.41
LINC00943-206ENST00000540250 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.48□□□□□ -0.41
LINC00943-206ENST00000540250 PCDHGC3Q9UN70 934 aa12.48□□□□□ -0.41
LINC00943-206ENST00000540250 PBRM1Q86U86 1689 aa12.48□□□□□ -0.41
LINC00943-206ENST00000540250 FDX1P10109 184 aa12.47□□□□□ -0.41
LINC00943-206ENST00000540250 GAPVD1Q14C86 1478 aa12.46□□□□□ -0.41
LINC00943-206ENST00000540250 CEP162Q5TB80 1403 aa12.46□□□□□ -0.41
LINC00943-206ENST00000540250 BMP1P13497 986 aa12.46□□□□□ -0.41
LINC00943-206ENST00000540250 UBTFP17480 764 aaKnown RBP12.46□□□□□ -0.41
LINC00943-206ENST00000540250 C6orf229H3BNL8 230 aa12.45□□□□□ -0.42
LINC00943-206ENST00000540250 TRIM46Q7Z4K8 759 aa12.45□□□□□ -0.42
LINC00943-206ENST00000540250 SH3BP2P78314 561 aa12.44□□□□□ -0.42
LINC00943-206ENST00000540250 KRI1Q8N9T8 703 aaKnown RBP12.44□□□□□ -0.42
LINC00943-206ENST00000540250 WASF2Q9Y6W5 498 aa12.44□□□□□ -0.42
LINC00943-206ENST00000540250 CARMIL1Q5VZK9 1371 aa12.43□□□□□ -0.42
LINC00943-206ENST00000540250 TDRD9Q8NDG6 1382 aaKnown RBP12.43□□□□□ -0.42
LINC00943-206ENST00000540250 CAPN5O15484 640 aaPredicted RBP12.43□□□□□ -0.42
LINC00943-206ENST00000540250 CCNYL3P0C7X3 344 aa12.43□□□□□ -0.42
LINC00943-206ENST00000540250 MS4A1P11836 297 aa12.43□□□□□ -0.42
LINC00943-206ENST00000540250 EIF4G3O43432 1585 aaKnown RBP12.41□□□□□ -0.42
LINC00943-206ENST00000540250 LINC01559Q495D7 138 aa12.4□□□□□ -0.42
LINC00943-206ENST00000540250 SPIRE2Q8WWL2 714 aa12.4□□□□□ -0.42
LINC00943-206ENST00000540250 NXF1Q9UBU9 619 aaKnown RBP12.4□□□□□ -0.42
LINC00943-206ENST00000540250 ZNF608Q9ULD9 1512 aaPredicted RBP12.39□□□□□ -0.43
LINC00943-206ENST00000540250 NDUFV2P19404 249 aa12.39□□□□□ -0.43
LINC00943-206ENST00000540250 SSTR3P32745 418 aaPredicted RBP12.39□□□□□ -0.43
LINC00943-206ENST00000540250 SLC16A10Q8TF71 515 aa12.39□□□□□ -0.43
LINC00943-206ENST00000540250 UNC93B1Q9H1C4 597 aa12.39□□□□□ -0.43
LINC00943-206ENST00000540250 GRIN2BQ13224 1484 aa12.39□□□□□ -0.43
LINC00943-206ENST00000540250 ADAMTS12P58397 1594 aa12.39□□□□□ -0.43
LINC00943-206ENST00000540250 CTTNBP2Q8WZ74 1663 aa12.38□□□□□ -0.43
LINC00943-206ENST00000540250 PTPRNQ16849 979 aa12.38□□□□□ -0.43
LINC00943-206ENST00000540250 AQRO60306 1485 aaKnown RBP eCLIP12.38□□□□□ -0.43
LINC00943-206ENST00000540250 CLIP1P30622 1438 aa12.37□□□□□ -0.43
LINC00943-206ENST00000540250 BAP1Q92560 729 aa12.37□□□□□ -0.43
LINC00943-206ENST00000540250 EVA1BQ9NVM1 165 aa12.37□□□□□ -0.43
LINC00943-206ENST00000540250 TLL2Q9Y6L7 1015 aa12.37□□□□□ -0.43
LINC00943-206ENST00000540250 MOXD2PA6NHM9 499 aa12.36□□□□□ -0.43
LINC00943-206ENST00000540250 GMPRP36959 345 aa12.36□□□□□ -0.43
LINC00943-206ENST00000540250 VEGFBP49765 207 aa12.35□□□□□ -0.43
LINC00943-206ENST00000540250 PRR7Q8TB68 274 aa12.35□□□□□ -0.43
LINC00943-206ENST00000540250 KCNH2Q12809 1159 aa12.34□□□□□ -0.43
LINC00943-206ENST00000540250 FHAD1B1AJZ9 1412 aa12.33□□□□□ -0.44
LINC00943-206ENST00000540250 ZNF511Q8NB15 262 aa12.32□□□□□ -0.44
LINC00943-206ENST00000540250 ZFP42Q96MM3 310 aa12.32□□□□□ -0.44
LINC00943-206ENST00000540250 NPAS3Q8IXF0 933 aa12.31□□□□□ -0.44
LINC00943-206ENST00000540250 IRF7Q92985 503 aa12.31□□□□□ -0.44
LINC00943-206ENST00000540250 SNAPC4Q5SXM2 1469 aa12.31□□□□□ -0.44
LINC00943-206ENST00000540250 MAGI1Q96QZ7 1491 aaPredicted RBP12.3□□□□□ -0.44
LINC00943-206ENST00000540250 LORP23490 312 aaPredicted RBP12.3□□□□□ -0.44
LINC00943-206ENST00000540250 MTMR2Q13614 643 aa12.3□□□□□ -0.44
LINC00943-206ENST00000540250 TTLL12Q14166 644 aaPredicted RBP12.3□□□□□ -0.44
LINC00943-206ENST00000540250 TMEM132AQ24JP5 1023 aa12.3□□□□□ -0.44
LINC00943-206ENST00000540250 H3BM21 787 aa12.29□□□□□ -0.44
LINC00943-206ENST00000540250 VARSP26640 1264 aaKnown RBP12.29□□□□□ -0.44
LINC00943-206ENST00000540250 NNTQ13423 1086 aa12.29□□□□□ -0.44
LINC00943-206ENST00000540250 ARAP1Q96P48 1450 aa12.28□□□□□ -0.44
LINC00943-206ENST00000540250 ERBB4Q15303 1308 aa12.28□□□□□ -0.44
LINC00943-206ENST00000540250 VPS8Q8N3P4 1428 aa12.28□□□□□ -0.44
LINC00943-206ENST00000540250 PLEKHG3A1L390 1219 aa12.27□□□□□ -0.45
LINC00943-206ENST00000540250 DESI1Q6ICB0 168 aa12.27□□□□□ -0.45
LINC00943-206ENST00000540250 ZC3H15Q8WU90 426 aaKnown RBP12.27□□□□□ -0.45
LINC00943-206ENST00000540250 ARHGAP35Q9NRY4 1499 aa12.27□□□□□ -0.45
LINC00943-206ENST00000540250 SPDYE5A6NIY4 337 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms