RNA–Protein interactions for RNA: ENST00000537335.5

POLR1B-216, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 4,961 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-216ENST00000537335 PPFIBP1Q86W92 1011 aa14.01□□□□□ -0.17
POLR1B-216ENST00000537335 API5Q9BZZ5 524 aaKnown RBP14.01□□□□□ -0.17
POLR1B-216ENST00000537335 WRNQ14191 1432 aaPredicted RBP eCLIP14.01□□□□□ -0.17
POLR1B-216ENST00000537335 PANK3Q9H999 370 aa14.01□□□□□ -0.17
POLR1B-216ENST00000537335 BANK1Q8NDB2 785 aa14.01□□□□□ -0.17
POLR1B-216ENST00000537335 SMG6Q86US8 1419 aaKnown RBP14.01□□□□□ -0.17
POLR1B-216ENST00000537335 CNTLNQ9NXG0 1405 aa14.01□□□□□ -0.17
POLR1B-216ENST00000537335 A0A1B0GUL7 405 aa14.01□□□□□ -0.17
POLR1B-216ENST00000537335 MCM3P25205 808 aa14.01□□□□□ -0.17
POLR1B-216ENST00000537335 ZFP91Q96JP5 570 aaPredicted RBP14.01□□□□□ -0.17
POLR1B-216ENST00000537335 HDGFL2Q7Z4V5 671 aaPredicted RBP14□□□□□ -0.17
POLR1B-216ENST00000537335 PANK2Q9BZ23 570 aa14□□□□□ -0.17
POLR1B-216ENST00000537335 NUP62CLQ9H1M0 184 aa14□□□□□ -0.17
POLR1B-216ENST00000537335 BRD2P25440 801 aaKnown RBP14□□□□□ -0.17
POLR1B-216ENST00000537335 KRT85P78386 507 aa14□□□□□ -0.17
POLR1B-216ENST00000537335 TAX1BP1Q86VP1 789 aa14□□□□□ -0.17
POLR1B-216ENST00000537335 CEP57L1Q8IYX8 460 aa14□□□□□ -0.17
POLR1B-216ENST00000537335 ZKSCAN5Q9Y2L8 839 aa14□□□□□ -0.17
POLR1B-216ENST00000537335 PDE3AQ14432 1141 aa14□□□□□ -0.17
POLR1B-216ENST00000537335 SLC26A8Q96RN1 970 aa14□□□□□ -0.17
POLR1B-216ENST00000537335 RSPH14Q9UHP6 348 aa14□□□□□ -0.17
POLR1B-216ENST00000537335 TMCO5BA8MYB1 307 aa14□□□□□ -0.17
POLR1B-216ENST00000537335 ZSCAN12O43309 604 aa14□□□□□ -0.17
POLR1B-216ENST00000537335 NEMFO60524 1076 aa14□□□□□ -0.17
POLR1B-216ENST00000537335 ENOX2Q16206 610 aaKnown RBP14□□□□□ -0.17
POLR1B-216ENST00000537335 EZRP15311 586 aaKnown RBP13.99□□□□□ -0.17
POLR1B-216ENST00000537335 SFPQP23246 707 aaKnown RBP eCLIP13.99□□□□□ -0.17
POLR1B-216ENST00000537335 USP25Q9UHP3 1055 aa13.99□□□□□ -0.17
POLR1B-216ENST00000537335 ST20-MTHFSA0A0A6YYL1 179 aa13.99□□□□□ -0.17
POLR1B-216ENST00000537335 HS1BP3Q53T59 392 aa13.99□□□□□ -0.17
POLR1B-216ENST00000537335 RRAGDQ9NQL2 400 aaPredicted RBP13.99□□□□□ -0.17
POLR1B-216ENST00000537335 LRRFIP2Q9Y608 721 aaKnown RBP13.99□□□□□ -0.17
POLR1B-216ENST00000537335 GBP6Q6ZN66 633 aa13.99□□□□□ -0.17
POLR1B-216ENST00000537335 MICALL1Q8N3F8 863 aa13.99□□□□□ -0.17
POLR1B-216ENST00000537335 NOLC1Q14978 699 aaKnown RBP eCLIP13.99□□□□□ -0.17
POLR1B-216ENST00000537335 ZNHIT6Q9NWK9 470 aaKnown RBP13.99□□□□□ -0.17
POLR1B-216ENST00000537335 GOLGA6L10A0A0M3HER8 536 aa13.98□□□□□ -0.17
POLR1B-216ENST00000537335 POTEB2H3BUK9 544 aa13.98□□□□□ -0.17
POLR1B-216ENST00000537335 ELL2O00472 640 aaPredicted RBP13.98□□□□□ -0.17
POLR1B-216ENST00000537335 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.98□□□□□ -0.17
POLR1B-216ENST00000537335 PIP4K2AP48426 406 aaPredicted RBP13.98□□□□□ -0.17
POLR1B-216ENST00000537335 MAP3K11Q16584 847 aa13.98□□□□□ -0.17
POLR1B-216ENST00000537335 HSP90AB2PQ58FF8 381 aa13.98□□□□□ -0.17
POLR1B-216ENST00000537335 ROCK1Q13464 1354 aa13.97□□□□□ -0.17
POLR1B-216ENST00000537335 CCDC7Q96M83 1385 aa13.97□□□□□ -0.17
POLR1B-216ENST00000537335 GABPB1Q06547 395 aaPredicted RBP13.96□□□□□ -0.17
POLR1B-216ENST00000537335 ARHGAP29Q52LW3 1261 aa13.96□□□□□ -0.17
POLR1B-216ENST00000537335 TNPO1Q92973 898 aaKnown RBP13.96□□□□□ -0.17
POLR1B-216ENST00000537335 CDCA7LQ96GN5 454 aa13.96□□□□□ -0.17
POLR1B-216ENST00000537335 ZNF396Q96N95 335 aaPredicted RBP13.96□□□□□ -0.17
POLR1B-216ENST00000537335 A0A1B0GUA9 196 aa13.96□□□□□ -0.17
POLR1B-216ENST00000537335 PSMA5P28066 241 aa13.96□□□□□ -0.17
POLR1B-216ENST00000537335 FOSBP53539 338 aa13.96□□□□□ -0.17
POLR1B-216ENST00000537335 TERF1P54274 439 aa13.96□□□□□ -0.17
POLR1B-216ENST00000537335 SAFBQ15424 915 aaKnown RBP eCLIP13.96□□□□□ -0.17
POLR1B-216ENST00000537335 BRPF1P55201 1214 aaPredicted RBP13.96□□□□□ -0.18
POLR1B-216ENST00000537335 MAP2K1Q02750 393 aaPredicted RBP13.96□□□□□ -0.18
POLR1B-216ENST00000537335 CCDC183Q5T5S1 534 aa13.96□□□□□ -0.18
POLR1B-216ENST00000537335 UPF3BQ9BZI7 483 aaKnown RBP13.96□□□□□ -0.18
POLR1B-216ENST00000537335 BRD4O60885 1362 aaPredicted RBP13.96□□□□□ -0.18
POLR1B-216ENST00000537335 ANKRD30AQ9BXX3 1397 aa13.96□□□□□ -0.18
POLR1B-216ENST00000537335 CCDC148Q8NFR7 591 aa13.95□□□□□ -0.18
POLR1B-216ENST00000537335 UVSSAQ2YD98 709 aa13.95□□□□□ -0.18
POLR1B-216ENST00000537335 CFAP45Q9UL16 551 aa13.95□□□□□ -0.18
POLR1B-216ENST00000537335 MYCBPQ99417 103 aaPredicted RBP13.95□□□□□ -0.18
POLR1B-216ENST00000537335 TBC1D2Q9BYX2 928 aa13.95□□□□□ -0.18
POLR1B-216ENST00000537335 KIF27Q86VH2 1401 aa13.95□□□□□ -0.18
POLR1B-216ENST00000537335 SETSIPP0DME0 302 aa13.95□□□□□ -0.18
POLR1B-216ENST00000537335 KLHL40Q2TBA0 621 aa13.95□□□□□ -0.18
POLR1B-216ENST00000537335 CEP135Q66GS9 1140 aa13.94□□□□□ -0.18
POLR1B-216ENST00000537335 ADCY5O95622 1261 aa13.94□□□□□ -0.18
POLR1B-216ENST00000537335 CASQ1P31415 396 aa13.94□□□□□ -0.18
POLR1B-216ENST00000537335 LRRFIP1Q32MZ4 808 aaKnown RBP13.94□□□□□ -0.18
POLR1B-216ENST00000537335 LUC7LQ9NQ29 371 aaKnown RBP13.94□□□□□ -0.18
POLR1B-216ENST00000537335 FBXO3Q9UK99 471 aa13.94□□□□□ -0.18
POLR1B-216ENST00000537335 HSPA4P34932 840 aa13.94□□□□□ -0.18
POLR1B-216ENST00000537335 CLIP2Q9UDT6 1046 aa13.94□□□□□ -0.18
POLR1B-216ENST00000537335 CAPN2P17655 700 aa13.93□□□□□ -0.18
POLR1B-216ENST00000537335 ZNF397Q8NF99 534 aaPredicted RBP13.93□□□□□ -0.18
POLR1B-216ENST00000537335 SEPT7Q16181 437 aaKnown RBP13.93□□□□□ -0.18
POLR1B-216ENST00000537335 ARFGAP3Q9NP61 516 aa13.93□□□□□ -0.18
POLR1B-216ENST00000537335 SMTNL1A8MU46 457 aa13.93□□□□□ -0.18
POLR1B-216ENST00000537335 HMGB1P09429 215 aaKnown RBP13.93□□□□□ -0.18
POLR1B-216ENST00000537335 STK38Q15208 465 aa13.93□□□□□ -0.18
POLR1B-216ENST00000537335 TRMT1Q9NXH9 659 aaKnown RBP13.93□□□□□ -0.18
POLR1B-216ENST00000537335 DACH1Q9UI36 760 aa13.93□□□□□ -0.18
POLR1B-216ENST00000537335 USP47Q96K76 1375 aa13.92□□□□□ -0.18
POLR1B-216ENST00000537335 KIF4BQ2VIQ3 1234 aa13.92□□□□□ -0.18
POLR1B-216ENST00000537335 CEP57Q86XR8 500 aa13.92□□□□□ -0.18
POLR1B-216ENST00000537335 DRC1Q96MC2 740 aa13.92□□□□□ -0.18
POLR1B-216ENST00000537335 MPHOSPH10O00566 681 aaKnown RBP13.92□□□□□ -0.18
POLR1B-216ENST00000537335 SOX12O15370 315 aa13.92□□□□□ -0.18
POLR1B-216ENST00000537335 EPB41L2O43491 1005 aaKnown RBP13.92□□□□□ -0.18
POLR1B-216ENST00000537335 IFIT2P09913 472 aaKnown RBP13.92□□□□□ -0.18
POLR1B-216ENST00000537335 CCDC175P0C221 793 aa13.92□□□□□ -0.18
POLR1B-216ENST00000537335 CCDC9Q9Y3X0 531 aaKnown RBP13.92□□□□□ -0.18
POLR1B-216ENST00000537335 GCC1Q96CN9 775 aa13.91□□□□□ -0.18
POLR1B-216ENST00000537335 KIF5CO60282 957 aa13.91□□□□□ -0.18
POLR1B-216ENST00000537335 ERC2O15083 957 aa13.91□□□□□ -0.18
POLR1B-216ENST00000537335 TRDNQ13061 729 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms