RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 WFS1O76024 890 aa5.47□□□□□ -1.53
CHMP4A-208ENST00000534106 SMCPP49901 116 aaPredicted RBP5.47□□□□□ -1.53
CHMP4A-208ENST00000534106 MMP16P51512 607 aa5.47□□□□□ -1.53
CHMP4A-208ENST00000534106 USP46P62068 366 aa5.47□□□□□ -1.53
CHMP4A-208ENST00000534106 NUTM1Q86Y26 1132 aa5.47□□□□□ -1.53
CHMP4A-208ENST00000534106 MRGPRX2Q96LB1 330 aa5.47□□□□□ -1.53
CHMP4A-208ENST00000534106 REPIN1Q9BWE0 567 aaKnown RBP5.47□□□□□ -1.53
CHMP4A-208ENST00000534106 KDM6BO15054 1643 aa5.47□□□□□ -1.53
CHMP4A-208ENST00000534106 LMTK3Q96Q04 1460 aa5.46□□□□□ -1.53
CHMP4A-208ENST00000534106 J3QL48 77 aa5.46□□□□□ -1.54
CHMP4A-208ENST00000534106 SOCS7O14512 581 aa5.46□□□□□ -1.54
CHMP4A-208ENST00000534106 IRF6O14896 467 aa5.46□□□□□ -1.54
CHMP4A-208ENST00000534106 SMPD1P17405 629 aa5.46□□□□□ -1.54
CHMP4A-208ENST00000534106 HLA-CQ95604 372 aa5.46□□□□□ -1.54
CHMP4A-208ENST00000534106 MINK1Q8N4C8 1332 aaPredicted RBP5.46□□□□□ -1.54
CHMP4A-208ENST00000534106 PRDM2Q13029 1718 aa5.45□□□□□ -1.54
CHMP4A-208ENST00000534106 ABCA10Q8WWZ4 1543 aa5.45□□□□□ -1.54
CHMP4A-208ENST00000534106 DXOO77932 396 aaKnown RBP5.45□□□□□ -1.54
CHMP4A-208ENST00000534106 RC3H1Q5TC82 1133 aaKnown RBP5.45□□□□□ -1.54
CHMP4A-208ENST00000534106 SENP2Q9HC62 589 aa5.45□□□□□ -1.54
CHMP4A-208ENST00000534106 ATP13A2Q9NQ11 1180 aa5.45□□□□□ -1.54
CHMP4A-208ENST00000534106 FHAD1B1AJZ9 1412 aa5.45□□□□□ -1.54
CHMP4A-208ENST00000534106 HOXA2O43364 376 aa5.44□□□□□ -1.54
CHMP4A-208ENST00000534106 CLCN1P35523 988 aa5.44□□□□□ -1.54
CHMP4A-208ENST00000534106 GUCA2AQ02747 115 aa5.44□□□□□ -1.54
CHMP4A-208ENST00000534106 GPCPD1Q9NPB8 672 aa5.44□□□□□ -1.54
CHMP4A-208ENST00000534106 DIP2BQ9P265 1576 aa5.44□□□□□ -1.54
CHMP4A-208ENST00000534106 ALDH1A1P00352 501 aa5.43□□□□□ -1.54
CHMP4A-208ENST00000534106 JUNDP17535 347 aa5.43□□□□□ -1.54
CHMP4A-208ENST00000534106 SYMPKQ92797 1274 aaKnown RBP5.43□□□□□ -1.54
CHMP4A-208ENST00000534106 HPS1Q92902 700 aa5.43□□□□□ -1.54
CHMP4A-208ENST00000534106 CCDC102AQ96A19 550 aa5.43□□□□□ -1.54
CHMP4A-208ENST00000534106 KDM2AQ9Y2K7 1162 aa5.43□□□□□ -1.54
CHMP4A-208ENST00000534106 TSPOAP1O95153 1857 aa5.43□□□□□ -1.54
CHMP4A-208ENST00000534106 DISP3Q9P2K9 1392 aa5.42□□□□□ -1.54
CHMP4A-208ENST00000534106 WDR97A6NE52 1622 aa5.42□□□□□ -1.54
CHMP4A-208ENST00000534106 SHROOM2Q13796 1616 aa5.42□□□□□ -1.54
CHMP4A-208ENST00000534106 C6orf229H3BNL8 230 aa5.42□□□□□ -1.54
CHMP4A-208ENST00000534106 HSPA2P54652 639 aa5.42□□□□□ -1.54
CHMP4A-208ENST00000534106 WNT7BP56706 349 aa5.42□□□□□ -1.54
CHMP4A-208ENST00000534106 KIFC2Q96AC6 838 aa5.42□□□□□ -1.54
CHMP4A-208ENST00000534106 NUDT12Q9BQG2 462 aa5.42□□□□□ -1.54
CHMP4A-208ENST00000534106 WASF2Q9Y6W5 498 aa5.42□□□□□ -1.54
CHMP4A-208ENST00000534106 MAPKBP1O60336 1514 aa5.42□□□□□ -1.54
CHMP4A-208ENST00000534106 ADCY10Q96PN6 1610 aa5.41□□□□□ -1.54
CHMP4A-208ENST00000534106 PTPRGP23470 1445 aa5.41□□□□□ -1.54
CHMP4A-208ENST00000534106 WRNQ14191 1432 aaPredicted RBP eCLIP5.41□□□□□ -1.54
CHMP4A-208ENST00000534106 SNRPBP14678 240 aaKnown RBP5.41□□□□□ -1.54
CHMP4A-208ENST00000534106 SKOR1P84550 965 aa5.41□□□□□ -1.54
CHMP4A-208ENST00000534106 INSM1Q01101 510 aaPredicted RBP5.41□□□□□ -1.54
CHMP4A-208ENST00000534106 EHBP1Q8NDI1 1231 aa5.41□□□□□ -1.54
CHMP4A-208ENST00000534106 ABCA5Q8WWZ7 1642 aa5.41□□□□□ -1.54
CHMP4A-208ENST00000534106 PBRM1Q86U86 1689 aa5.4□□□□□ -1.54
CHMP4A-208ENST00000534106 ASXL2Q76L83 1435 aa5.4□□□□□ -1.54
CHMP4A-208ENST00000534106 FDX1P10109 184 aa5.4□□□□□ -1.54
CHMP4A-208ENST00000534106 NFX1Q12986 1120 aaKnown RBP5.4□□□□□ -1.54
CHMP4A-208ENST00000534106 RETREG3Q86VR2 466 aa5.4□□□□□ -1.54
CHMP4A-208ENST00000534106 TRIM47Q96LD4 638 aa5.4□□□□□ -1.54
CHMP4A-208ENST00000534106 FAM217BQ9NTX9 383 aaPredicted RBP5.4□□□□□ -1.54
CHMP4A-208ENST00000534106 ADAMTS12P58397 1594 aa5.4□□□□□ -1.55
CHMP4A-208ENST00000534106 TERTO14746 1132 aaKnown RBP5.39□□□□□ -1.55
CHMP4A-208ENST00000534106 LCE2AQ5TA79 106 aaPredicted RBP5.39□□□□□ -1.55
CHMP4A-208ENST00000534106 VSIG10Q8N0Z9 540 aa5.39□□□□□ -1.55
CHMP4A-208ENST00000534106 SLC16A10Q8TF71 515 aa5.39□□□□□ -1.55
CHMP4A-208ENST00000534106 MS4A1P11836 297 aa5.38□□□□□ -1.55
CHMP4A-208ENST00000534106 PTCRAQ6ISU1 281 aaPredicted RBP5.38□□□□□ -1.55
CHMP4A-208ENST00000534106 SUPT5HO00267 1087 aaKnown RBP5.37□□□□□ -1.55
CHMP4A-208ENST00000534106 CAPN5O15484 640 aaPredicted RBP5.37□□□□□ -1.55
CHMP4A-208ENST00000534106 CCNYL3P0C7X3 344 aa5.37□□□□□ -1.55
CHMP4A-208ENST00000534106 SSTR3P32745 418 aaPredicted RBP5.37□□□□□ -1.55
CHMP4A-208ENST00000534106 TTLL12Q14166 644 aaPredicted RBP5.37□□□□□ -1.55
CHMP4A-208ENST00000534106 LINC01559Q495D7 138 aa5.37□□□□□ -1.55
CHMP4A-208ENST00000534106 STK17AQ9UEE5 414 aa5.37□□□□□ -1.55
CHMP4A-208ENST00000534106 IGF1RP08069 1367 aa5.37□□□□□ -1.55
CHMP4A-208ENST00000534106 ARID3CA6NKF2 412 aa5.36□□□□□ -1.55
CHMP4A-208ENST00000534106 WIPF1O43516 503 aa5.36□□□□□ -1.55
CHMP4A-208ENST00000534106 PLB1Q6P1J6 1458 aa5.36□□□□□ -1.55
CHMP4A-208ENST00000534106 EPRSP07814 1512 aaKnown RBP5.35□□□□□ -1.55
CHMP4A-208ENST00000534106 TNIKQ9UKE5 1360 aa5.35□□□□□ -1.55
CHMP4A-208ENST00000534106 ARID4BQ4LE39 1312 aaPredicted RBP5.35□□□□□ -1.55
CHMP4A-208ENST00000534106 PLEKHG3A1L390 1219 aa5.35□□□□□ -1.55
CHMP4A-208ENST00000534106 RAPGEF3O95398 923 aa5.35□□□□□ -1.55
CHMP4A-208ENST00000534106 BMP1P13497 986 aa5.35□□□□□ -1.55
CHMP4A-208ENST00000534106 NDUFV2P19404 249 aa5.35□□□□□ -1.55
CHMP4A-208ENST00000534106 SH3BP2P78314 561 aa5.35□□□□□ -1.55
CHMP4A-208ENST00000534106 SPIRE2Q8WWL2 714 aa5.35□□□□□ -1.55
CHMP4A-208ENST00000534106 BAP1Q92560 729 aa5.35□□□□□ -1.55
CHMP4A-208ENST00000534106 UNC93B1Q9H1C4 597 aa5.35□□□□□ -1.55
CHMP4A-208ENST00000534106 PCDHGC3Q9UN70 934 aa5.35□□□□□ -1.55
CHMP4A-208ENST00000534106 PPRC1Q5VV67 1664 aaKnown RBP5.34□□□□□ -1.55
CHMP4A-208ENST00000534106 ABCC2Q92887 1545 aa5.34□□□□□ -1.55
CHMP4A-208ENST00000534106 KIAA0586Q9BVV6 1533 aa5.34□□□□□ -1.55
CHMP4A-208ENST00000534106 FAM181BA6NEQ2 426 aa5.34□□□□□ -1.55
CHMP4A-208ENST00000534106 SIAH2O43255 324 aa5.34□□□□□ -1.55
CHMP4A-208ENST00000534106 CTHP32929 405 aa5.34□□□□□ -1.55
CHMP4A-208ENST00000534106 MTMR2Q13614 643 aa5.34□□□□□ -1.55
CHMP4A-208ENST00000534106 PTPRNQ16849 979 aa5.34□□□□□ -1.55
CHMP4A-208ENST00000534106 PRR7Q8TB68 274 aa5.34□□□□□ -1.55
CHMP4A-208ENST00000534106 NXF1Q9UBU9 619 aaKnown RBP5.34□□□□□ -1.55
CHMP4A-208ENST00000534106 ERICH3Q5RHP9 1530 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms