RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 YTHDC2Q9H6S0 1430 aaKnown RBP15.27■□□□□ 0.03
CCDC90B-218ENST00000533761 LRPPRCP42704 1394 aaKnown RBP15.27■□□□□ 0.03
CCDC90B-218ENST00000533761 EIF3AQ14152 1382 aaKnown RBP15.27■□□□□ 0.03
CCDC90B-218ENST00000533761 C3orf67Q6ZVT6 689 aa15.27■□□□□ 0.03
CCDC90B-218ENST00000533761 ABCC11Q96J66 1382 aa15.26■□□□□ 0.03
CCDC90B-218ENST00000533761 HSPA5P11021 654 aaKnown RBP15.26■□□□□ 0.03
CCDC90B-218ENST00000533761 PTPRUQ92729 1446 aa15.25■□□□□ 0.03
CCDC90B-218ENST00000533761 SLC24A1O60721 1099 aa15.25■□□□□ 0.03
CCDC90B-218ENST00000533761 ASXL1Q8IXJ9 1541 aa15.25■□□□□ 0.03
CCDC90B-218ENST00000533761 DIEXFQ68CQ4 756 aaKnown RBP15.24■□□□□ 0.03
CCDC90B-218ENST00000533761 SIRT1Q96EB6 747 aa15.24■□□□□ 0.03
CCDC90B-218ENST00000533761 TRAK1Q9UPV9 953 aa15.24■□□□□ 0.03
CCDC90B-218ENST00000533761 NKTRP30414 1462 aaKnown RBP15.23■□□□□ 0.03
CCDC90B-218ENST00000533761 TECPR2O15040 1411 aa15.23■□□□□ 0.03
CCDC90B-218ENST00000533761 NWD1Q149M9 1564 aa15.23■□□□□ 0.03
CCDC90B-218ENST00000533761 PROSER2Q86WR7 435 aaPredicted RBP15.23■□□□□ 0.03
CCDC90B-218ENST00000533761 XRN1Q8IZH2 1706 aaKnown RBP15.22■□□□□ 0.03
CCDC90B-218ENST00000533761 CPS1P31327 1500 aa15.22■□□□□ 0.03
CCDC90B-218ENST00000533761 PTCH1Q13635 1447 aa15.21■□□□□ 0.03
CCDC90B-218ENST00000533761 FAM135BQ49AJ0 1406 aa15.2■□□□□ 0.02
CCDC90B-218ENST00000533761 POGKQ9P215 609 aa15.2■□□□□ 0.02
CCDC90B-218ENST00000533761 ROBO2Q9HCK4 1378 aa15.2■□□□□ 0.02
CCDC90B-218ENST00000533761 STRCP1A6NGW2 1772 aa15.2■□□□□ 0.02
CCDC90B-218ENST00000533761 PDCD7Q8N8D1 485 aaKnown RBP15.19■□□□□ 0.02
CCDC90B-218ENST00000533761 L3MBTL3Q96JM7 780 aaPredicted RBP15.19■□□□□ 0.02
CCDC90B-218ENST00000533761 PRAM1Q96QH2 718 aa15.19■□□□□ 0.02
CCDC90B-218ENST00000533761 DLC1Q96QB1 1528 aa15.19■□□□□ 0.02
CCDC90B-218ENST00000533761 KNDC1Q76NI1 1749 aa15.19■□□□□ 0.02
CCDC90B-218ENST00000533761 LTBP4Q8N2S1 1624 aa15.19■□□□□ 0.02
CCDC90B-218ENST00000533761 WAPLQ7Z5K2 1190 aa15.18■□□□□ 0.02
CCDC90B-218ENST00000533761 C14orf37Q86TY3 774 aa15.18■□□□□ 0.02
CCDC90B-218ENST00000533761 NCOA3Q9Y6Q9 1424 aa15.17■□□□□ 0.02
CCDC90B-218ENST00000533761 LRRC7Q96NW7 1537 aa15.17■□□□□ 0.02
CCDC90B-218ENST00000533761 TMEM94Q12767 1356 aa15.17■□□□□ 0.02
CCDC90B-218ENST00000533761 HIRIP3Q9BW71 556 aaPredicted RBP15.17■□□□□ 0.02
CCDC90B-218ENST00000533761 RBM33Q96EV2 1170 aaKnown RBP15.16■□□□□ 0.02
CCDC90B-218ENST00000533761 CENPJQ9HC77 1338 aaPredicted RBP15.16■□□□□ 0.02
CCDC90B-218ENST00000533761 ST20-MTHFSA0A0A6YYL1 179 aa15.15■□□□□ 0.02
CCDC90B-218ENST00000533761 SAFB2Q14151 953 aaKnown RBP eCLIP15.15■□□□□ 0.02
CCDC90B-218ENST00000533761 ARHGEF28Q8N1W1 1705 aaKnown RBP15.15■□□□□ 0.02
CCDC90B-218ENST00000533761 CDCA8Q53HL2 280 aa15.15■□□□□ 0.02
CCDC90B-218ENST00000533761 C19orf44Q9H6X5 657 aa15.15■□□□□ 0.02
CCDC90B-218ENST00000533761 PLEKHH1Q9ULM0 1364 aa15.14■□□□□ 0.01
CCDC90B-218ENST00000533761 TMF1P82094 1093 aa15.13■□□□□ 0.01
CCDC90B-218ENST00000533761 MSH6P52701 1360 aa15.13■□□□□ 0.01
CCDC90B-218ENST00000533761 PCDHB8Q9UN66 801 aa15.12■□□□□ 0.01
CCDC90B-218ENST00000533761 CCDC7Q96M83 1385 aa15.12■□□□□ 0.01
CCDC90B-218ENST00000533761 CERKQ8TCT0 537 aa15.11■□□□□ 0.01
CCDC90B-218ENST00000533761 ADGRL3Q9HAR2 1447 aa15.11■□□□□ 0.01
CCDC90B-218ENST00000533761 PYGBP11216 843 aa15.11■□□□□ 0.01
CCDC90B-218ENST00000533761 ATF3P18847 181 aa15.11■□□□□ 0.01
CCDC90B-218ENST00000533761 WASHC2AQ641Q2 1341 aa15.1■□□□□ 0.01
CCDC90B-218ENST00000533761 MINK1Q8N4C8 1332 aaPredicted RBP15.1■□□□□ 0.01
CCDC90B-218ENST00000533761 CADPS2Q86UW7 1296 aa15.1■□□□□ 0.01
CCDC90B-218ENST00000533761 RNF166Q96A37 237 aaPredicted RBP15.1■□□□□ 0.01
CCDC90B-218ENST00000533761 SBNO2Q9Y2G9 1366 aa15.1■□□□□ 0.01
CCDC90B-218ENST00000533761 DDX10Q13206 875 aaKnown RBP15.09■□□□□ 0.01
CCDC90B-218ENST00000533761 XIRP1Q702N8 1843 aaKnown RBP15.09■□□□□ 0.01
CCDC90B-218ENST00000533761 KIF7Q2M1P5 1343 aa15.09■□□□□ 0.01
CCDC90B-218ENST00000533761 IQSEC2Q5JU85 1478 aa15.09■□□□□ 0.01
CCDC90B-218ENST00000533761 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.08■□□□□ 0.01
CCDC90B-218ENST00000533761 DCCP43146 1447 aa15.08■□□□□ 0
CCDC90B-218ENST00000533761 QRICH2Q9H0J4 1663 aa15.08■□□□□ 0
CCDC90B-218ENST00000533761 NALCNQ8IZF0 1738 aa15.07■□□□□ 0
CCDC90B-218ENST00000533761 EVC2Q86UK5 1308 aa15.07■□□□□ 0
CCDC90B-218ENST00000533761 WASLO00401 505 aaPredicted RBP15.07■□□□□ 0
CCDC90B-218ENST00000533761 TESK2Q96S53 571 aa15.07■□□□□ 0
CCDC90B-218ENST00000533761 MKRN3Q13064 507 aaKnown RBP15.06■□□□□ 0
CCDC90B-218ENST00000533761 DCAF8Q5TAQ9 597 aa15.06■□□□□ 0
CCDC90B-218ENST00000533761 TOM1O60784 492 aa15.05■□□□□ -0
CCDC90B-218ENST00000533761 CDK19Q9BWU1 502 aa15.05■□□□□ -0
CCDC90B-218ENST00000533761 ADGRB2O60241 1585 aa15.05■□□□□ -0
CCDC90B-218ENST00000533761 CDC42BPGQ6DT37 1551 aa15.05■□□□□ -0
CCDC90B-218ENST00000533761 SRPK2P78362 688 aaKnown RBP15.04■□□□□ -0
CCDC90B-218ENST00000533761 GOLGA2Q08379 1002 aa15.04■□□□□ -0
CCDC90B-218ENST00000533761 POLR3GLQ9BT43 218 aa15.04■□□□□ -0
CCDC90B-218ENST00000533761 SLAIN2Q9P270 581 aa15.03■□□□□ -0
CCDC90B-218ENST00000533761 ANP32CO43423 234 aa15.02□□□□□ -0.01
CCDC90B-218ENST00000533761 NUTM2FA1L443 756 aa15.01□□□□□ -0.01
CCDC90B-218ENST00000533761 C11orf95C9JLR9 678 aaPredicted RBP15.01□□□□□ -0.01
CCDC90B-218ENST00000533761 UBAP1LF5GYI3 381 aa15.01□□□□□ -0.01
CCDC90B-218ENST00000533761 PUS7Q96PZ0 661 aaKnown RBP15.01□□□□□ -0.01
CCDC90B-218ENST00000533761 CABP2Q9NPB3 220 aa15□□□□□ -0.01
CCDC90B-218ENST00000533761 ANKARQ7Z5J8 1434 aa14.99□□□□□ -0.01
CCDC90B-218ENST00000533761 NUDT16Q96DE0 195 aaKnown RBP14.99□□□□□ -0.01
CCDC90B-218ENST00000533761 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.99□□□□□ -0.01
CCDC90B-218ENST00000533761 TULP4Q9NRJ4 1543 aa14.99□□□□□ -0.01
CCDC90B-218ENST00000533761 DISP3Q9P2K9 1392 aa14.99□□□□□ -0.01
CCDC90B-218ENST00000533761 FMN2Q9NZ56 1722 aa14.99□□□□□ -0.01
CCDC90B-218ENST00000533761 MST1RQ04912 1400 aa14.99□□□□□ -0.01
CCDC90B-218ENST00000533761 ESCO1Q5FWF5 840 aa14.98□□□□□ -0.01
CCDC90B-218ENST00000533761 ATAD2Q6PL18 1390 aa14.98□□□□□ -0.01
CCDC90B-218ENST00000533761 C1orf167Q5SNV9 1468 aa14.97□□□□□ -0.01
CCDC90B-218ENST00000533761 HOXB3P14651 431 aaPredicted RBP14.97□□□□□ -0.01
CCDC90B-218ENST00000533761 HOXB1P14653 301 aaPredicted RBP14.97□□□□□ -0.01
CCDC90B-218ENST00000533761 PRR36Q9H6K5 1346 aa14.96□□□□□ -0.02
CCDC90B-218ENST00000533761 PIP4K2BP78356 416 aa14.95□□□□□ -0.02
CCDC90B-218ENST00000533761 ORAI2Q96SN7 254 aa14.95□□□□□ -0.02
CCDC90B-218ENST00000533761 ERBB3P21860 1342 aa14.95□□□□□ -0.02
CCDC90B-218ENST00000533761 ATP7BP35670 1465 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms