RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 EZH2Q15910 746 aaKnown RBP15.49■□□□□ 0.07
COPB1-207ENST00000529866 FAM196AQ6ZSG2 479 aa15.49■□□□□ 0.07
COPB1-207ENST00000529866 COL14A1Q05707 1796 aaKnown RBP15.49■□□□□ 0.07
COPB1-207ENST00000529866 DLC1Q96QB1 1528 aa15.48■□□□□ 0.07
COPB1-207ENST00000529866 CAMKK2Q96RR4 588 aa15.47■□□□□ 0.07
COPB1-207ENST00000529866 PAK3O75914 559 aaPredicted RBP15.46■□□□□ 0.07
COPB1-207ENST00000529866 TRIM37O94972 964 aa15.46■□□□□ 0.07
COPB1-207ENST00000529866 YY1P25490 414 aa15.46■□□□□ 0.07
COPB1-207ENST00000529866 NGDNQ8NEJ9 315 aaKnown RBP15.46■□□□□ 0.07
COPB1-207ENST00000529866 SPATA31A1Q5TZJ5 1347 aa15.45■□□□□ 0.06
COPB1-207ENST00000529866 THSD7AQ9UPZ6 1657 aa15.45■□□□□ 0.06
COPB1-207ENST00000529866 APBA3O96018 575 aa15.45■□□□□ 0.06
COPB1-207ENST00000529866 HIRIP3Q9BW71 556 aaPredicted RBP15.45■□□□□ 0.06
COPB1-207ENST00000529866 TULP4Q9NRJ4 1543 aa15.44■□□□□ 0.06
COPB1-207ENST00000529866 NBPF8Q3BBV2 869 aa15.44■□□□□ 0.06
COPB1-207ENST00000529866 NBPF14Q5TI25 921 aa15.44■□□□□ 0.06
COPB1-207ENST00000529866 MINK1Q8N4C8 1332 aaPredicted RBP15.43■□□□□ 0.06
COPB1-207ENST00000529866 DCAF8L1A6NGE4 600 aa15.43■□□□□ 0.06
COPB1-207ENST00000529866 STRN4Q9NRL3 753 aa15.43■□□□□ 0.06
COPB1-207ENST00000529866 TRAK1Q9UPV9 953 aa15.43■□□□□ 0.06
COPB1-207ENST00000529866 KIAA0232Q92628 1395 aa15.43■□□□□ 0.06
COPB1-207ENST00000529866 RGPD8O14715 1765 aaPredicted RBP15.43■□□□□ 0.06
COPB1-207ENST00000529866 TRPM3Q9HCF6 1732 aaPredicted RBP15.43■□□□□ 0.06
COPB1-207ENST00000529866 PRR36Q9H6K5 1346 aa15.43■□□□□ 0.06
COPB1-207ENST00000529866 WASLO00401 505 aaPredicted RBP15.42■□□□□ 0.06
COPB1-207ENST00000529866 PDE3BQ13370 1112 aa15.42■□□□□ 0.06
COPB1-207ENST00000529866 ALS2Q96Q42 1657 aa15.41■□□□□ 0.06
COPB1-207ENST00000529866 TNS1Q9HBL0 1735 aaKnown RBP15.41■□□□□ 0.06
COPB1-207ENST00000529866 PPP1R1BQ9UD71 204 aaPredicted RBP15.41■□□□□ 0.06
COPB1-207ENST00000529866 CHRNA2Q15822 529 aa15.4■□□□□ 0.06
COPB1-207ENST00000529866 BARGINQ6ZT62 677 aa15.4■□□□□ 0.06
COPB1-207ENST00000529866 USP35Q9P2H5 1018 aa15.4■□□□□ 0.06
COPB1-207ENST00000529866 ATP7BP35670 1465 aa15.4■□□□□ 0.06
COPB1-207ENST00000529866 EVA1CP58658 441 aa15.39■□□□□ 0.05
COPB1-207ENST00000529866 ADGRB1O14514 1584 aa15.39■□□□□ 0.05
COPB1-207ENST00000529866 ZC3H6P61129 1189 aaKnown RBP15.38■□□□□ 0.05
COPB1-207ENST00000529866 SPON1Q9HCB6 807 aa15.38■□□□□ 0.05
COPB1-207ENST00000529866 NINLQ9Y2I6 1382 aa15.37■□□□□ 0.05
COPB1-207ENST00000529866 SSH2Q76I76 1423 aa15.37■□□□□ 0.05
COPB1-207ENST00000529866 C11orf95C9JLR9 678 aaPredicted RBP15.37■□□□□ 0.05
COPB1-207ENST00000529866 TCP11L2Q8N4U5 519 aa15.37■□□□□ 0.05
COPB1-207ENST00000529866 KCNQ2O43526 872 aa15.34■□□□□ 0.05
COPB1-207ENST00000529866 NUDT16Q96DE0 195 aaKnown RBP15.34■□□□□ 0.05
COPB1-207ENST00000529866 THRAP3Q9Y2W1 955 aaKnown RBP15.34■□□□□ 0.05
COPB1-207ENST00000529866 NUTM2GQ5VZR2 741 aa15.33■□□□□ 0.04
COPB1-207ENST00000529866 LARP1Q6PKG0 1096 aaKnown RBP15.33■□□□□ 0.04
COPB1-207ENST00000529866 STAC3Q96MF2 364 aa15.33■□□□□ 0.04
COPB1-207ENST00000529866 CRYBG1Q9Y4K1 1723 aa15.33■□□□□ 0.04
COPB1-207ENST00000529866 CPDO75976 1380 aa15.32■□□□□ 0.04
COPB1-207ENST00000529866 KDM2AQ9Y2K7 1162 aa15.31■□□□□ 0.04
COPB1-207ENST00000529866 RREB1Q92766 1687 aa15.31■□□□□ 0.04
COPB1-207ENST00000529866 POLR3AO14802 1390 aaPredicted RBP15.3■□□□□ 0.04
COPB1-207ENST00000529866 ABTB2Q8N961 1025 aa15.3■□□□□ 0.04
COPB1-207ENST00000529866 DCAF11Q8TEB1 546 aa15.3■□□□□ 0.04
COPB1-207ENST00000529866 NUP188Q5SRE5 1749 aa15.29■□□□□ 0.04
COPB1-207ENST00000529866 PHRF1Q9P1Y6 1649 aaKnown RBP15.29■□□□□ 0.04
COPB1-207ENST00000529866 OVOS2A0A0G2JMS6 1433 aa15.29■□□□□ 0.04
COPB1-207ENST00000529866 OVOS2A0A0J9YW53 1432 aa15.29■□□□□ 0.04
COPB1-207ENST00000529866 OVOS2Q6IE36 1432 aa15.29■□□□□ 0.04
COPB1-207ENST00000529866 ACEP12821 1306 aa15.29■□□□□ 0.04
COPB1-207ENST00000529866 CCDC61Q9Y6R9 512 aa15.29■□□□□ 0.04
COPB1-207ENST00000529866 USP19O94966 1318 aa15.28■□□□□ 0.04
COPB1-207ENST00000529866 CDK19Q9BWU1 502 aa15.28■□□□□ 0.04
COPB1-207ENST00000529866 ITSN1Q15811 1721 aa15.28■□□□□ 0.04
COPB1-207ENST00000529866 CAMTA1Q9Y6Y1 1673 aa15.28■□□□□ 0.04
COPB1-207ENST00000529866 NLRP13Q86W25 1043 aa15.27■□□□□ 0.04
COPB1-207ENST00000529866 NRKQ7Z2Y5 1582 aa15.27■□□□□ 0.03
COPB1-207ENST00000529866 PLEKHG3A1L390 1219 aa15.26■□□□□ 0.03
COPB1-207ENST00000529866 PLSCR1O15162 318 aa15.26■□□□□ 0.03
COPB1-207ENST00000529866 CRB1P82279 1406 aa15.26■□□□□ 0.03
COPB1-207ENST00000529866 GCP02774 474 aa15.25■□□□□ 0.03
COPB1-207ENST00000529866 COL5A2P05997 1499 aaPredicted RBP15.25■□□□□ 0.03
COPB1-207ENST00000529866 BCL11BQ9C0K0 894 aaPredicted RBP15.24■□□□□ 0.03
COPB1-207ENST00000529866 DDB1Q16531 1140 aa15.23■□□□□ 0.03
COPB1-207ENST00000529866 ANO8Q9HCE9 1232 aaPredicted RBP15.23■□□□□ 0.03
COPB1-207ENST00000529866 BRD4O60885 1362 aaPredicted RBP15.23■□□□□ 0.03
COPB1-207ENST00000529866 LMO7Q8WWI1 1683 aa15.22■□□□□ 0.03
COPB1-207ENST00000529866 UTRNP46939 3433 aa15.22■□□□□ 0.03
COPB1-207ENST00000529866 RAB3GAP2Q9H2M9 1393 aa15.22■□□□□ 0.03
COPB1-207ENST00000529866 ZBTB7CA1YPR0 619 aa15.21■□□□□ 0.03
COPB1-207ENST00000529866 TOM1L2Q6ZVM7 507 aa15.21■□□□□ 0.03
COPB1-207ENST00000529866 ARHGEF28Q8N1W1 1705 aaKnown RBP15.2■□□□□ 0.02
COPB1-207ENST00000529866 PARP4Q9UKK3 1724 aaKnown RBP15.2■□□□□ 0.02
COPB1-207ENST00000529866 ZBTB7AO95365 584 aa15.2■□□□□ 0.02
COPB1-207ENST00000529866 SRPK2P78362 688 aaKnown RBP15.2■□□□□ 0.02
COPB1-207ENST00000529866 ZNF784Q8NCA9 323 aaPredicted RBP15.2■□□□□ 0.02
COPB1-207ENST00000529866 CDCA7Q9BWT1 371 aaPredicted RBP15.2■□□□□ 0.02
COPB1-207ENST00000529866 AATKQ6ZMQ8 1374 aa15.2■□□□□ 0.02
COPB1-207ENST00000529866 TOPAZ1Q8N9V7 1692 aa15.19■□□□□ 0.02
COPB1-207ENST00000529866 PPIP5K1Q6PFW1 1433 aa15.19■□□□□ 0.02
COPB1-207ENST00000529866 RGPD3A6NKT7 1758 aaPredicted RBP15.19■□□□□ 0.02
COPB1-207ENST00000529866 RGPD4Q7Z3J3 1758 aa15.19■□□□□ 0.02
COPB1-207ENST00000529866 STK32BQ9NY57 414 aa15.19■□□□□ 0.02
COPB1-207ENST00000529866 BCL9O00512 1426 aa15.17■□□□□ 0.02
COPB1-207ENST00000529866 NLRP6P59044 892 aa15.17■□□□□ 0.02
COPB1-207ENST00000529866 PTGER2P43116 358 aa15.16■□□□□ 0.02
COPB1-207ENST00000529866 LRRC37A3O60309 1634 aa15.16■□□□□ 0.02
COPB1-207ENST00000529866 WDR17Q8IZU2 1322 aa15.16■□□□□ 0.02
COPB1-207ENST00000529866 PEAK1Q9H792 1746 aa15.15■□□□□ 0.02
COPB1-207ENST00000529866 SENP3-EIF4A1A0A087X0R7 540 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms