RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 KCNQ2O43526 872 aa17.48■□□□□ 0.39
AMBRA1-207ENST00000529553 NINLQ9Y2I6 1382 aa17.48■□□□□ 0.39
AMBRA1-207ENST00000529553 COL14A1Q05707 1796 aaKnown RBP17.48■□□□□ 0.39
AMBRA1-207ENST00000529553 PRDM11Q9NQV5 511 aa17.47■□□□□ 0.39
AMBRA1-207ENST00000529553 ADGRB2O60241 1585 aa17.47■□□□□ 0.39
AMBRA1-207ENST00000529553 THSD7AQ9UPZ6 1657 aa17.46■□□□□ 0.39
AMBRA1-207ENST00000529553 PRAM1Q96QH2 718 aa17.46■□□□□ 0.39
AMBRA1-207ENST00000529553 ABCA3Q99758 1704 aa17.46■□□□□ 0.39
AMBRA1-207ENST00000529553 TNS1Q9HBL0 1735 aaKnown RBP17.45■□□□□ 0.38
AMBRA1-207ENST00000529553 ACIN1Q9UKV3 1341 aaKnown RBP17.45■□□□□ 0.38
AMBRA1-207ENST00000529553 PDE3BQ13370 1112 aa17.44■□□□□ 0.38
AMBRA1-207ENST00000529553 BARGINQ6ZT62 677 aa17.44■□□□□ 0.38
AMBRA1-207ENST00000529553 C11orf95C9JLR9 678 aaPredicted RBP17.43■□□□□ 0.38
AMBRA1-207ENST00000529553 POGKQ9P215 609 aa17.43■□□□□ 0.38
AMBRA1-207ENST00000529553 SAFB2Q14151 953 aaKnown RBP eCLIP17.42■□□□□ 0.38
AMBRA1-207ENST00000529553 EIF3AQ14152 1382 aaKnown RBP17.41■□□□□ 0.38
AMBRA1-207ENST00000529553 CFAP70Q5T0N1 1121 aa17.41■□□□□ 0.38
AMBRA1-207ENST00000529553 RGPD8O14715 1765 aaPredicted RBP17.4■□□□□ 0.38
AMBRA1-207ENST00000529553 IFT172Q9UG01 1749 aa17.4■□□□□ 0.38
AMBRA1-207ENST00000529553 PAK3O75914 559 aaPredicted RBP17.39■□□□□ 0.37
AMBRA1-207ENST00000529553 NGDNQ8NEJ9 315 aaKnown RBP17.39■□□□□ 0.37
AMBRA1-207ENST00000529553 STRN4Q9NRL3 753 aa17.39■□□□□ 0.37
AMBRA1-207ENST00000529553 EVA1CP58658 441 aa17.38■□□□□ 0.37
AMBRA1-207ENST00000529553 KIAA0232Q92628 1395 aa17.38■□□□□ 0.37
AMBRA1-207ENST00000529553 TRPM3Q9HCF6 1732 aaPredicted RBP17.38■□□□□ 0.37
AMBRA1-207ENST00000529553 ALS2Q96Q42 1657 aa17.37■□□□□ 0.37
AMBRA1-207ENST00000529553 ZNF784Q8NCA9 323 aaPredicted RBP17.37■□□□□ 0.37
AMBRA1-207ENST00000529553 THRAP3Q9Y2W1 955 aaKnown RBP17.37■□□□□ 0.37
AMBRA1-207ENST00000529553 DLC1Q96QB1 1528 aa17.37■□□□□ 0.37
AMBRA1-207ENST00000529553 PLSCR1O15162 318 aa17.36■□□□□ 0.37
AMBRA1-207ENST00000529553 CHRNA2Q15822 529 aa17.36■□□□□ 0.37
AMBRA1-207ENST00000529553 PPARGC1BQ86YN6 1023 aaKnown RBP17.36■□□□□ 0.37
AMBRA1-207ENST00000529553 MPHOSPH9Q99550 1183 aa17.36■□□□□ 0.37
AMBRA1-207ENST00000529553 WASLO00401 505 aaPredicted RBP17.35■□□□□ 0.37
AMBRA1-207ENST00000529553 TCP11L2Q8N4U5 519 aa17.35■□□□□ 0.37
AMBRA1-207ENST00000529553 USP35Q9P2H5 1018 aa17.35■□□□□ 0.37
AMBRA1-207ENST00000529553 PRR36Q9H6K5 1346 aa17.35■□□□□ 0.37
AMBRA1-207ENST00000529553 RREB1Q92766 1687 aa17.35■□□□□ 0.37
AMBRA1-207ENST00000529553 ZC3H6P61129 1189 aaKnown RBP17.33■□□□□ 0.36
AMBRA1-207ENST00000529553 IFFO2Q5TF58 517 aa17.33■□□□□ 0.36
AMBRA1-207ENST00000529553 HIRIP3Q9BW71 556 aaPredicted RBP17.33■□□□□ 0.36
AMBRA1-207ENST00000529553 NUP188Q5SRE5 1749 aa17.32■□□□□ 0.36
AMBRA1-207ENST00000529553 SSH2Q76I76 1423 aa17.31■□□□□ 0.36
AMBRA1-207ENST00000529553 MINK1Q8N4C8 1332 aaPredicted RBP17.3■□□□□ 0.36
AMBRA1-207ENST00000529553 SENP3-EIF4A1A0A087X0R7 540 aa17.3■□□□□ 0.36
AMBRA1-207ENST00000529553 C1QTNF8P60827 252 aa17.3■□□□□ 0.36
AMBRA1-207ENST00000529553 LARP1Q6PKG0 1096 aaKnown RBP17.3■□□□□ 0.36
AMBRA1-207ENST00000529553 TRAK1Q9UPV9 953 aa17.3■□□□□ 0.36
AMBRA1-207ENST00000529553 TULP4Q9NRJ4 1543 aa17.3■□□□□ 0.36
AMBRA1-207ENST00000529553 CRYBG1Q9Y4K1 1723 aa17.28■□□□□ 0.36
AMBRA1-207ENST00000529553 CPDO75976 1380 aa17.28■□□□□ 0.36
AMBRA1-207ENST00000529553 ATP7BP35670 1465 aa17.27■□□□□ 0.36
AMBRA1-207ENST00000529553 PTGER2P43116 358 aa17.27■□□□□ 0.36
AMBRA1-207ENST00000529553 NUDT16Q96DE0 195 aaKnown RBP17.27■□□□□ 0.36
AMBRA1-207ENST00000529553 BCL11BQ9C0K0 894 aaPredicted RBP17.27■□□□□ 0.36
AMBRA1-207ENST00000529553 SYT17Q9BSW7 474 aa17.25■□□□□ 0.35
AMBRA1-207ENST00000529553 OVOS2A0A0G2JMS6 1433 aa17.24■□□□□ 0.35
AMBRA1-207ENST00000529553 OVOS2A0A0J9YW53 1432 aa17.24■□□□□ 0.35
AMBRA1-207ENST00000529553 OVOS2Q6IE36 1432 aa17.24■□□□□ 0.35
AMBRA1-207ENST00000529553 CAMTA1Q9Y6Y1 1673 aa17.24■□□□□ 0.35
AMBRA1-207ENST00000529553 NUTM2GQ5VZR2 741 aa17.24■□□□□ 0.35
AMBRA1-207ENST00000529553 ANO8Q9HCE9 1232 aaPredicted RBP17.24■□□□□ 0.35
AMBRA1-207ENST00000529553 UTRNP46939 3433 aa17.23■□□□□ 0.35
AMBRA1-207ENST00000529553 ZBTB7AO95365 584 aa17.23■□□□□ 0.35
AMBRA1-207ENST00000529553 PROM2Q8N271 834 aa17.23■□□□□ 0.35
AMBRA1-207ENST00000529553 STAC3Q96MF2 364 aa17.23■□□□□ 0.35
AMBRA1-207ENST00000529553 ADGRB1O14514 1584 aa17.23■□□□□ 0.35
AMBRA1-207ENST00000529553 ABTB2Q8N961 1025 aa17.22■□□□□ 0.35
AMBRA1-207ENST00000529553 FHDC1Q9C0D6 1143 aaPredicted RBP17.22■□□□□ 0.35
AMBRA1-207ENST00000529553 POLR3AO14802 1390 aaPredicted RBP17.22■□□□□ 0.35
AMBRA1-207ENST00000529553 PLEKHG3A1L390 1219 aa17.21■□□□□ 0.35
AMBRA1-207ENST00000529553 GCP02774 474 aa17.21■□□□□ 0.35
AMBRA1-207ENST00000529553 NLRP13Q86W25 1043 aa17.21■□□□□ 0.35
AMBRA1-207ENST00000529553 PDGFDQ9GZP0 370 aaPredicted RBP17.21■□□□□ 0.35
AMBRA1-207ENST00000529553 ATF5Q9Y2D1 282 aaPredicted RBP17.21■□□□□ 0.35
AMBRA1-207ENST00000529553 USP19O94966 1318 aa17.21■□□□□ 0.34
AMBRA1-207ENST00000529553 ACEP12821 1306 aa17.21■□□□□ 0.34
AMBRA1-207ENST00000529553 DDB1Q16531 1140 aa17.2■□□□□ 0.34
AMBRA1-207ENST00000529553 MTFR1LQ9H019 292 aa17.2■□□□□ 0.34
AMBRA1-207ENST00000529553 STK32BQ9NY57 414 aa17.2■□□□□ 0.34
AMBRA1-207ENST00000529553 CCDC61Q9Y6R9 512 aa17.2■□□□□ 0.34
AMBRA1-207ENST00000529553 CDK19Q9BWU1 502 aa17.19■□□□□ 0.34
AMBRA1-207ENST00000529553 RGPD3A6NKT7 1758 aaPredicted RBP17.19■□□□□ 0.34
AMBRA1-207ENST00000529553 RGPD4Q7Z3J3 1758 aa17.19■□□□□ 0.34
AMBRA1-207ENST00000529553 BCL9O00512 1426 aa17.19■□□□□ 0.34
AMBRA1-207ENST00000529553 CRB1P82279 1406 aa17.19■□□□□ 0.34
AMBRA1-207ENST00000529553 NRKQ7Z2Y5 1582 aa17.19■□□□□ 0.34
AMBRA1-207ENST00000529553 PHRF1Q9P1Y6 1649 aaKnown RBP17.18■□□□□ 0.34
AMBRA1-207ENST00000529553 SLC15A2Q16348 729 aa17.18■□□□□ 0.34
AMBRA1-207ENST00000529553 SGIP1Q9BQI5 828 aa17.18■□□□□ 0.34
AMBRA1-207ENST00000529553 CDCA7Q9BWT1 371 aaPredicted RBP17.18■□□□□ 0.34
AMBRA1-207ENST00000529553 CASZ1Q86V15 1759 aa17.17■□□□□ 0.34
AMBRA1-207ENST00000529553 PARP4Q9UKK3 1724 aaKnown RBP17.17■□□□□ 0.34
AMBRA1-207ENST00000529553 TXNRD1Q16881 649 aa17.16■□□□□ 0.34
AMBRA1-207ENST00000529553 COL5A2P05997 1499 aaPredicted RBP17.16■□□□□ 0.34
AMBRA1-207ENST00000529553 LMO7Q8WWI1 1683 aa17.16■□□□□ 0.34
AMBRA1-207ENST00000529553 PTF1AQ7RTS3 328 aa17.15■□□□□ 0.34
AMBRA1-207ENST00000529553 PEAK1Q9H792 1746 aa17.15■□□□□ 0.34
AMBRA1-207ENST00000529553 BRD4O60885 1362 aaPredicted RBP17.15■□□□□ 0.34
AMBRA1-207ENST00000529553 AATKQ6ZMQ8 1374 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms