RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 TRPM3Q9HCF6 1732 aaPredicted RBP20.73■□□□□ 0.91
SSRP1-203ENST00000526696 RRBP1Q9P2E9 1410 aaKnown RBP20.71■□□□□ 0.91
SSRP1-203ENST00000526696 ALS2Q96Q42 1657 aa20.7■□□□□ 0.91
SSRP1-203ENST00000526696 C1QTNF8P60827 252 aa20.7■□□□□ 0.9
SSRP1-203ENST00000526696 NBPF8Q3BBV2 869 aa20.7■□□□□ 0.9
SSRP1-203ENST00000526696 NBPF14Q5TI25 921 aa20.7■□□□□ 0.9
SSRP1-203ENST00000526696 SPATA31A1Q5TZJ5 1347 aa20.7■□□□□ 0.9
SSRP1-203ENST00000526696 CRYBG1Q9Y4K1 1723 aa20.7■□□□□ 0.9
SSRP1-203ENST00000526696 CEP350Q5VT06 3117 aa20.69■□□□□ 0.9
SSRP1-203ENST00000526696 PMFBP1Q8TBY8 1022 aa20.67■□□□□ 0.9
SSRP1-203ENST00000526696 YTHDC2Q9H6S0 1430 aaKnown RBP20.66■□□□□ 0.9
SSRP1-203ENST00000526696 NRKQ7Z2Y5 1582 aa20.66■□□□□ 0.9
SSRP1-203ENST00000526696 CHD4Q14839 1912 aa20.66■□□□□ 0.9
SSRP1-203ENST00000526696 CASZ1Q86V15 1759 aa20.65■□□□□ 0.9
SSRP1-203ENST00000526696 PDGFDQ9GZP0 370 aaPredicted RBP20.63■□□□□ 0.89
SSRP1-203ENST00000526696 MYOM1P52179 1685 aa20.62■□□□□ 0.89
SSRP1-203ENST00000526696 SIRT1Q96EB6 747 aa20.62■□□□□ 0.89
SSRP1-203ENST00000526696 PRDM11Q9NQV5 511 aa20.61■□□□□ 0.89
SSRP1-203ENST00000526696 ANO8Q9HCE9 1232 aaPredicted RBP20.6■□□□□ 0.89
SSRP1-203ENST00000526696 PIK3C2GO75747 1445 aa20.6■□□□□ 0.89
SSRP1-203ENST00000526696 PTGER2P43116 358 aa20.58■□□□□ 0.89
SSRP1-203ENST00000526696 CHRNA2Q15822 529 aa20.58■□□□□ 0.89
SSRP1-203ENST00000526696 STRN4Q9NRL3 753 aa20.58■□□□□ 0.89
SSRP1-203ENST00000526696 KIAA0232Q92628 1395 aa20.58■□□□□ 0.88
SSRP1-203ENST00000526696 SAFB2Q14151 953 aaKnown RBP eCLIP20.57■□□□□ 0.88
SSRP1-203ENST00000526696 ANKARQ7Z5J8 1434 aa20.57■□□□□ 0.88
SSRP1-203ENST00000526696 USP35Q9P2H5 1018 aa20.57■□□□□ 0.88
SSRP1-203ENST00000526696 SPATA31E1Q6ZUB1 1445 aa20.56■□□□□ 0.88
SSRP1-203ENST00000526696 PDE3BQ13370 1112 aa20.56■□□□□ 0.88
SSRP1-203ENST00000526696 RGL3Q3MIN7 710 aa20.56■□□□□ 0.88
SSRP1-203ENST00000526696 BARGINQ6ZT62 677 aa20.56■□□□□ 0.88
SSRP1-203ENST00000526696 ACIN1Q9UKV3 1341 aaKnown RBP20.55■□□□□ 0.88
SSRP1-203ENST00000526696 ZBTB7AO95365 584 aa20.54■□□□□ 0.88
SSRP1-203ENST00000526696 ANKRD30BQ9BXX2 1392 aa20.54■□□□□ 0.88
SSRP1-203ENST00000526696 PRAM1Q96QH2 718 aa20.53■□□□□ 0.88
SSRP1-203ENST00000526696 SYT17Q9BSW7 474 aa20.53■□□□□ 0.88
SSRP1-203ENST00000526696 GPRASP1Q5JY77 1395 aa20.53■□□□□ 0.88
SSRP1-203ENST00000526696 RGPD3A6NKT7 1758 aaPredicted RBP20.53■□□□□ 0.88
SSRP1-203ENST00000526696 RGPD4Q7Z3J3 1758 aa20.53■□□□□ 0.88
SSRP1-203ENST00000526696 PRR36Q9H6K5 1346 aa20.53■□□□□ 0.88
SSRP1-203ENST00000526696 FHDC1Q9C0D6 1143 aaPredicted RBP20.52■□□□□ 0.88
SSRP1-203ENST00000526696 SSH2Q76I76 1423 aa20.52■□□□□ 0.87
SSRP1-203ENST00000526696 SBF2Q86WG5 1849 aa20.51■□□□□ 0.87
SSRP1-203ENST00000526696 PHRF1Q9P1Y6 1649 aaKnown RBP20.51■□□□□ 0.87
SSRP1-203ENST00000526696 PEAK1Q9H792 1746 aa20.5■□□□□ 0.87
SSRP1-203ENST00000526696 SLC4A1APQ9BWU0 796 aaKnown RBP20.5■□□□□ 0.87
SSRP1-203ENST00000526696 ATF5Q9Y2D1 282 aaPredicted RBP20.5■□□□□ 0.87
SSRP1-203ENST00000526696 PTF1AQ7RTS3 328 aa20.49■□□□□ 0.87
SSRP1-203ENST00000526696 C14orf93Q9H972 538 aaKnown RBP20.49■□□□□ 0.87
SSRP1-203ENST00000526696 PLSCR1O15162 318 aa20.48■□□□□ 0.87
SSRP1-203ENST00000526696 ZC3H6P61129 1189 aaKnown RBP20.48■□□□□ 0.87
SSRP1-203ENST00000526696 LARP1Q6PKG0 1096 aaKnown RBP20.48■□□□□ 0.87
SSRP1-203ENST00000526696 PROM2Q8N271 834 aa20.48■□□□□ 0.87
SSRP1-203ENST00000526696 PARP4Q9UKK3 1724 aaKnown RBP20.47■□□□□ 0.87
SSRP1-203ENST00000526696 PAK3O75914 559 aaPredicted RBP20.47■□□□□ 0.87
SSRP1-203ENST00000526696 CFAP70Q5T0N1 1121 aa20.46■□□□□ 0.87
SSRP1-203ENST00000526696 TCP11L2Q8N4U5 519 aa20.46■□□□□ 0.87
SSRP1-203ENST00000526696 SGIP1Q9BQI5 828 aa20.45■□□□□ 0.86
SSRP1-203ENST00000526696 HIRIP3Q9BW71 556 aaPredicted RBP20.45■□□□□ 0.86
SSRP1-203ENST00000526696 DHX57Q6P158 1386 aaKnown RBP20.45■□□□□ 0.86
SSRP1-203ENST00000526696 DLC1Q96QB1 1528 aa20.44■□□□□ 0.86
SSRP1-203ENST00000526696 GOLGB1Q14789 3259 aaKnown RBP20.44■□□□□ 0.86
SSRP1-203ENST00000526696 LMO7Q8WWI1 1683 aa20.44■□□□□ 0.86
SSRP1-203ENST00000526696 GIGYF1O75420 1035 aaPredicted RBP20.43■□□□□ 0.86
SSRP1-203ENST00000526696 EVA1CP58658 441 aa20.43■□□□□ 0.86
SSRP1-203ENST00000526696 TULP4Q9NRJ4 1543 aa20.43■□□□□ 0.86
SSRP1-203ENST00000526696 NGDNQ8NEJ9 315 aaKnown RBP20.42■□□□□ 0.86
SSRP1-203ENST00000526696 NUTM2GQ5VZR2 741 aa20.41■□□□□ 0.86
SSRP1-203ENST00000526696 BCL11BQ9C0K0 894 aaPredicted RBP20.41■□□□□ 0.86
SSRP1-203ENST00000526696 POGKQ9P215 609 aa20.41■□□□□ 0.86
SSRP1-203ENST00000526696 OVOS2A0A0G2JMS6 1433 aa20.41■□□□□ 0.86
SSRP1-203ENST00000526696 OVOS2A0A0J9YW53 1432 aa20.41■□□□□ 0.86
SSRP1-203ENST00000526696 OVOS2Q6IE36 1432 aa20.41■□□□□ 0.86
SSRP1-203ENST00000526696 MINK1Q8N4C8 1332 aaPredicted RBP20.39■□□□□ 0.85
SSRP1-203ENST00000526696 THRAP3Q9Y2W1 955 aaKnown RBP20.39■□□□□ 0.85
SSRP1-203ENST00000526696 SHANK3Q9BYB0 1731 aa20.39■□□□□ 0.85
SSRP1-203ENST00000526696 LRRC37A3O60309 1634 aa20.37■□□□□ 0.85
SSRP1-203ENST00000526696 ATP7BP35670 1465 aa20.37■□□□□ 0.85
SSRP1-203ENST00000526696 C11orf95C9JLR9 678 aaPredicted RBP20.36■□□□□ 0.85
SSRP1-203ENST00000526696 WASLO00401 505 aaPredicted RBP20.36■□□□□ 0.85
SSRP1-203ENST00000526696 PPARGC1BQ86YN6 1023 aaKnown RBP20.36■□□□□ 0.85
SSRP1-203ENST00000526696 MTFR1LQ9H019 292 aa20.36■□□□□ 0.85
SSRP1-203ENST00000526696 SLC15A2Q16348 729 aa20.35■□□□□ 0.85
SSRP1-203ENST00000526696 EIF3AQ14152 1382 aaKnown RBP20.34■□□□□ 0.85
SSRP1-203ENST00000526696 MAP3K5Q99683 1374 aa20.34■□□□□ 0.85
SSRP1-203ENST00000526696 ADGRB1O14514 1584 aa20.34■□□□□ 0.85
SSRP1-203ENST00000526696 COL5A2P05997 1499 aaPredicted RBP20.34■□□□□ 0.85
SSRP1-203ENST00000526696 CPDO75976 1380 aa20.34■□□□□ 0.85
SSRP1-203ENST00000526696 ARXQ96QS3 562 aa20.33■□□□□ 0.85
SSRP1-203ENST00000526696 STK32BQ9NY57 414 aa20.33■□□□□ 0.85
SSRP1-203ENST00000526696 TXNRD1Q16881 649 aa20.32■□□□□ 0.84
SSRP1-203ENST00000526696 TRAK1Q9UPV9 953 aa20.32■□□□□ 0.84
SSRP1-203ENST00000526696 GPR162Q16538 588 aa20.3■□□□□ 0.84
SSRP1-203ENST00000526696 ITSN1Q15811 1721 aa20.3■□□□□ 0.84
SSRP1-203ENST00000526696 CRB1P82279 1406 aa20.29■□□□□ 0.84
SSRP1-203ENST00000526696 MARCH10Q8NA82 808 aaPredicted RBP20.29■□□□□ 0.84
SSRP1-203ENST00000526696 USP19O94966 1318 aa20.28■□□□□ 0.84
SSRP1-203ENST00000526696 DDB1Q16531 1140 aa20.28■□□□□ 0.84
SSRP1-203ENST00000526696 BCL9O00512 1426 aa20.27■□□□□ 0.84
SSRP1-203ENST00000526696 NUDT16Q96DE0 195 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms