RNA–Protein interactions for RNA: ENST00000525124.1

DEPDC1-205, Transcript of DEP domain containing 1, humanhuman

TSL 3

Gene DEPDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-205ENST00000525124 PTPRUQ92729 1446 aa12.78□□□□□ -0.36
DEPDC1-205ENST00000525124 RRBP1Q9P2E9 1410 aaKnown RBP12.78□□□□□ -0.36
DEPDC1-205ENST00000525124 EFCAB3Q8N7B9 438 aa12.77□□□□□ -0.37
DEPDC1-205ENST00000525124 NALCNQ8IZF0 1738 aa12.76□□□□□ -0.37
DEPDC1-205ENST00000525124 SPATA31A6Q5VVP1 1343 aa12.76□□□□□ -0.37
DEPDC1-205ENST00000525124 G3V3G9 751 aa12.75□□□□□ -0.37
DEPDC1-205ENST00000525124 PPLO60437 1756 aa12.75□□□□□ -0.37
DEPDC1-205ENST00000525124 LAMC1P11047 1609 aa12.75□□□□□ -0.37
DEPDC1-205ENST00000525124 HOXB3P14651 431 aaPredicted RBP12.75□□□□□ -0.37
DEPDC1-205ENST00000525124 POTEAQ6S8J7 498 aa12.75□□□□□ -0.37
DEPDC1-205ENST00000525124 HS3ST6Q96QI5 342 aa12.74□□□□□ -0.37
DEPDC1-205ENST00000525124 AMOTL2Q9Y2J4 779 aa12.74□□□□□ -0.37
DEPDC1-205ENST00000525124 LRP6O75581 1613 aa12.73□□□□□ -0.37
DEPDC1-205ENST00000525124 NAIPQ13075 1403 aa12.73□□□□□ -0.37
DEPDC1-205ENST00000525124 FAM205CA6NFA0 338 aa12.73□□□□□ -0.37
DEPDC1-205ENST00000525124 ATF3P18847 181 aa12.73□□□□□ -0.37
DEPDC1-205ENST00000525124 ASXL1Q8IXJ9 1541 aa12.72□□□□□ -0.37
DEPDC1-205ENST00000525124 PRAG1Q86YV5 1406 aa12.72□□□□□ -0.37
DEPDC1-205ENST00000525124 NUTM2DQ5VT03 806 aaPredicted RBP12.72□□□□□ -0.37
DEPDC1-205ENST00000525124 MST1RQ04912 1400 aa12.71□□□□□ -0.37
DEPDC1-205ENST00000525124 SETD5Q9C0A6 1442 aa12.71□□□□□ -0.37
DEPDC1-205ENST00000525124 C14orf37Q86TY3 774 aa12.71□□□□□ -0.37
DEPDC1-205ENST00000525124 RNF25Q96BH1 459 aaPredicted RBP12.71□□□□□ -0.37
DEPDC1-205ENST00000525124 KRTAP3-3Q9BYR6 98 aa12.71□□□□□ -0.37
DEPDC1-205ENST00000525124 KRTAP3-2Q9BYR7 98 aa12.71□□□□□ -0.37
DEPDC1-205ENST00000525124 ADGRL3Q9HAR2 1447 aa12.71□□□□□ -0.38
DEPDC1-205ENST00000525124 ITGAEP38570 1179 aa12.7□□□□□ -0.38
DEPDC1-205ENST00000525124 BRINP3Q76B58 766 aa12.7□□□□□ -0.38
DEPDC1-205ENST00000525124 IFT172Q9UG01 1749 aa12.7□□□□□ -0.38
DEPDC1-205ENST00000525124 METP08581 1390 aa12.69□□□□□ -0.38
DEPDC1-205ENST00000525124 HFM1A2PYH4 1435 aa12.69□□□□□ -0.38
DEPDC1-205ENST00000525124 PTCH1Q13635 1447 aa12.69□□□□□ -0.38
DEPDC1-205ENST00000525124 ZNF326Q5BKZ1 582 aaKnown RBP12.68□□□□□ -0.38
DEPDC1-205ENST00000525124 CDK12Q9NYV4 1490 aaPredicted RBP12.67□□□□□ -0.38
DEPDC1-205ENST00000525124 ZNF772Q68DY9 489 aaPredicted RBP12.67□□□□□ -0.38
DEPDC1-205ENST00000525124 KNDC1Q76NI1 1749 aa12.65□□□□□ -0.38
DEPDC1-205ENST00000525124 RPGRIP1LQ68CZ1 1315 aa12.65□□□□□ -0.38
DEPDC1-205ENST00000525124 RIOK3O14730 519 aaKnown RBP12.65□□□□□ -0.38
DEPDC1-205ENST00000525124 MARF1Q9Y4F3 1742 aaKnown RBP12.65□□□□□ -0.38
DEPDC1-205ENST00000525124 COL22A1Q8NFW1 1626 aaPredicted RBP12.64□□□□□ -0.39
DEPDC1-205ENST00000525124 VGFO15240 615 aaPredicted RBP12.64□□□□□ -0.39
DEPDC1-205ENST00000525124 HOXB1P14653 301 aaPredicted RBP12.64□□□□□ -0.39
DEPDC1-205ENST00000525124 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.63□□□□□ -0.39
DEPDC1-205ENST00000525124 TMEM92Q6UXU6 159 aa12.63□□□□□ -0.39
DEPDC1-205ENST00000525124 LRRC59Q96AG4 307 aaKnown RBP12.63□□□□□ -0.39
DEPDC1-205ENST00000525124 ZFP91Q96JP5 570 aaPredicted RBP12.63□□□□□ -0.39
DEPDC1-205ENST00000525124 C1orf167Q5SNV9 1468 aa12.63□□□□□ -0.39
DEPDC1-205ENST00000525124 CDC42BPGQ6DT37 1551 aa12.62□□□□□ -0.39
DEPDC1-205ENST00000525124 MEX3CQ5U5Q3 659 aaKnown RBP12.62□□□□□ -0.39
DEPDC1-205ENST00000525124 PPARGC1BQ86YN6 1023 aaKnown RBP12.62□□□□□ -0.39
DEPDC1-205ENST00000525124 MICALL2Q8IY33 904 aa12.62□□□□□ -0.39
DEPDC1-205ENST00000525124 MS4A4AQ96JQ5 239 aa12.62□□□□□ -0.39
DEPDC1-205ENST00000525124 SOX12O15370 315 aa12.61□□□□□ -0.39
DEPDC1-205ENST00000525124 ZNF710Q8N1W2 664 aa12.61□□□□□ -0.39
DEPDC1-205ENST00000525124 PNPLA6Q8IY17 1366 aa12.6□□□□□ -0.39
DEPDC1-205ENST00000525124 DOK7Q18PE1 504 aa12.6□□□□□ -0.39
DEPDC1-205ENST00000525124 ROBO2Q9HCK4 1378 aa12.58□□□□□ -0.4
DEPDC1-205ENST00000525124 TECPR2O15040 1411 aa12.58□□□□□ -0.4
DEPDC1-205ENST00000525124 RXRBP28702 533 aa12.58□□□□□ -0.4
DEPDC1-205ENST00000525124 PHF8Q9UPP1 1060 aa12.58□□□□□ -0.4
DEPDC1-205ENST00000525124 SOS2Q07890 1332 aaPredicted RBP12.58□□□□□ -0.4
DEPDC1-205ENST00000525124 TRIM52Q96A61 297 aa12.57□□□□□ -0.4
DEPDC1-205ENST00000525124 AFF2P51816 1311 aa12.57□□□□□ -0.4
DEPDC1-205ENST00000525124 ACIN1Q9UKV3 1341 aaKnown RBP12.57□□□□□ -0.4
DEPDC1-205ENST00000525124 FMN2Q9NZ56 1722 aa12.57□□□□□ -0.4
DEPDC1-205ENST00000525124 SPATA31E1Q6ZUB1 1445 aa12.56□□□□□ -0.4
DEPDC1-205ENST00000525124 UPF1Q92900 1129 aaKnown RBP eCLIP12.56□□□□□ -0.4
DEPDC1-205ENST00000525124 KIF1AQ12756 1690 aa12.56□□□□□ -0.4
DEPDC1-205ENST00000525124 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.56□□□□□ -0.4
DEPDC1-205ENST00000525124 NUTM2BA6NNL0 878 aaPredicted RBP12.55□□□□□ -0.4
DEPDC1-205ENST00000525124 NUTM2EB1AL46 878 aaPredicted RBP12.55□□□□□ -0.4
DEPDC1-205ENST00000525124 NUTM2AQ8IVF1 878 aaPredicted RBP12.55□□□□□ -0.4
DEPDC1-205ENST00000525124 ANKRD30BQ9BXX2 1392 aa12.55□□□□□ -0.4
DEPDC1-205ENST00000525124 CCDC144AA2RUR9 1427 aa12.54□□□□□ -0.4
DEPDC1-205ENST00000525124 RGPD8O14715 1765 aaPredicted RBP12.54□□□□□ -0.4
DEPDC1-205ENST00000525124 ERBB3P21860 1342 aa12.54□□□□□ -0.4
DEPDC1-205ENST00000525124 PXDNQ92626 1479 aa12.53□□□□□ -0.4
DEPDC1-205ENST00000525124 RBM6P78332 1123 aaKnown RBP12.53□□□□□ -0.4
DEPDC1-205ENST00000525124 DDX17Q92841 729 aaKnown RBP12.52□□□□□ -0.41
DEPDC1-205ENST00000525124 RGS12O14924 1447 aa12.52□□□□□ -0.41
DEPDC1-205ENST00000525124 PIK3C2GO75747 1445 aa12.52□□□□□ -0.41
DEPDC1-205ENST00000525124 MYOM2P54296 1465 aa12.52□□□□□ -0.41
DEPDC1-205ENST00000525124 RIMBP2O15034 1052 aa12.51□□□□□ -0.41
DEPDC1-205ENST00000525124 ORAI2Q96SN7 254 aa12.51□□□□□ -0.41
DEPDC1-205ENST00000525124 QTRT2Q9H974 415 aaKnown RBP12.51□□□□□ -0.41
DEPDC1-205ENST00000525124 NPHP3Q7Z494 1330 aa12.51□□□□□ -0.41
DEPDC1-205ENST00000525124 LRPPRCP42704 1394 aaKnown RBP12.51□□□□□ -0.41
DEPDC1-205ENST00000525124 ABCC11Q96J66 1382 aa12.51□□□□□ -0.41
DEPDC1-205ENST00000525124 C8orf37Q96NL8 207 aa12.5□□□□□ -0.41
DEPDC1-205ENST00000525124 ADGRF5Q8IZF2 1346 aa12.5□□□□□ -0.41
DEPDC1-205ENST00000525124 NRXN1Q9ULB1 1477 aa12.5□□□□□ -0.41
DEPDC1-205ENST00000525124 FNBP4Q8N3X1 1017 aaPredicted RBP12.49□□□□□ -0.41
DEPDC1-205ENST00000525124 SIRT1Q96EB6 747 aa12.49□□□□□ -0.41
DEPDC1-205ENST00000525124 MPHOSPH9Q99550 1183 aa12.49□□□□□ -0.41
DEPDC1-205ENST00000525124 ATRNO75882 1429 aa12.48□□□□□ -0.41
DEPDC1-205ENST00000525124 VARS2Q5ST30 1063 aaKnown RBP12.48□□□□□ -0.41
DEPDC1-205ENST00000525124 GPR153Q6NV75 609 aa12.48□□□□□ -0.41
DEPDC1-205ENST00000525124 NGLY1Q96IV0 654 aa12.48□□□□□ -0.41
DEPDC1-205ENST00000525124 ZSWIM6Q9HCJ5 1215 aa12.48□□□□□ -0.41
DEPDC1-205ENST00000525124 ABCA3Q99758 1704 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms