RNA–Protein interactions for RNA: ENST00000524208.5

POLB-215, Transcript of DNA polymerase beta, humanhuman

TSL 5

Gene POLB, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-215ENST00000524208 SLC52A1Q9NWF4 448 aa11.69□□□□□ -0.54
POLB-215ENST00000524208 ADAMTS13Q76LX8 1427 aa11.69□□□□□ -0.54
POLB-215ENST00000524208 MFSD10Q14728 455 aa11.68□□□□□ -0.54
POLB-215ENST00000524208 PLEKHG1Q9ULL1 1385 aa11.67□□□□□ -0.54
POLB-215ENST00000524208 DDX27Q96GQ7 796 aaKnown RBP11.67□□□□□ -0.54
POLB-215ENST00000524208 NEXMIFQ5QGS0 1516 aa11.66□□□□□ -0.54
POLB-215ENST00000524208 EMP3P54852 163 aa11.66□□□□□ -0.54
POLB-215ENST00000524208 E2F4Q16254 413 aa11.66□□□□□ -0.54
POLB-215ENST00000524208 KCNV2Q8TDN2 545 aa11.66□□□□□ -0.54
POLB-215ENST00000524208 NKTRP30414 1462 aaKnown RBP11.65□□□□□ -0.54
POLB-215ENST00000524208 SETBP1Q9Y6X0 1596 aa11.65□□□□□ -0.54
POLB-215ENST00000524208 DIP2AQ14689 1571 aa11.64□□□□□ -0.55
POLB-215ENST00000524208 GPHNQ9NQX3 736 aaPredicted RBP11.64□□□□□ -0.55
POLB-215ENST00000524208 UBAP1LF5GYI3 381 aa11.63□□□□□ -0.55
POLB-215ENST00000524208 SLC26A8Q96RN1 970 aa11.63□□□□□ -0.55
POLB-215ENST00000524208 EID1Q9Y6B2 187 aa11.63□□□□□ -0.55
POLB-215ENST00000524208 XRN1Q8IZH2 1706 aaKnown RBP11.63□□□□□ -0.55
POLB-215ENST00000524208 NUTM2DQ5VT03 806 aaPredicted RBP11.62□□□□□ -0.55
POLB-215ENST00000524208 TMC2Q8TDI7 906 aa11.62□□□□□ -0.55
POLB-215ENST00000524208 SETD1AO15047 1707 aaKnown RBP11.62□□□□□ -0.55
POLB-215ENST00000524208 PTPRUQ92729 1446 aa11.61□□□□□ -0.55
POLB-215ENST00000524208 CHD2O14647 1828 aaKnown RBP11.61□□□□□ -0.55
POLB-215ENST00000524208 TMEM94Q12767 1356 aa11.61□□□□□ -0.55
POLB-215ENST00000524208 ARHGEF1Q92888 912 aaKnown RBP11.6□□□□□ -0.55
POLB-215ENST00000524208 PPP1R15BQ5SWA1 713 aa11.59□□□□□ -0.55
POLB-215ENST00000524208 SPATA31E1Q6ZUB1 1445 aa11.59□□□□□ -0.55
POLB-215ENST00000524208 SETD5Q9C0A6 1442 aa11.59□□□□□ -0.55
POLB-215ENST00000524208 RAB3GAP2Q9H2M9 1393 aa11.58□□□□□ -0.56
POLB-215ENST00000524208 PPLO60437 1756 aa11.57□□□□□ -0.56
POLB-215ENST00000524208 FAM205CA6NFA0 338 aa11.57□□□□□ -0.56
POLB-215ENST00000524208 KCNA6P17658 529 aa11.57□□□□□ -0.56
POLB-215ENST00000524208 TRIM52Q96A61 297 aa11.57□□□□□ -0.56
POLB-215ENST00000524208 RBM33Q96EV2 1170 aaKnown RBP11.57□□□□□ -0.56
POLB-215ENST00000524208 HS3ST6Q96QI5 342 aa11.57□□□□□ -0.56
POLB-215ENST00000524208 KIF1BO60333 1816 aa11.57□□□□□ -0.56
POLB-215ENST00000524208 IFT172Q9UG01 1749 aa11.57□□□□□ -0.56
POLB-215ENST00000524208 ASXL1Q8IXJ9 1541 aa11.56□□□□□ -0.56
POLB-215ENST00000524208 PPP1R15AO75807 674 aaPredicted RBP11.56□□□□□ -0.56
POLB-215ENST00000524208 METP08581 1390 aa11.55□□□□□ -0.56
POLB-215ENST00000524208 HSPA1LP34931 641 aa11.55□□□□□ -0.56
POLB-215ENST00000524208 FOXK1P85037 733 aa11.55□□□□□ -0.56
POLB-215ENST00000524208 CAMK2BQ13554 666 aa11.55□□□□□ -0.56
POLB-215ENST00000524208 PIK3R4Q99570 1358 aa11.54□□□□□ -0.56
POLB-215ENST00000524208 PIP4K2BP78356 416 aa11.54□□□□□ -0.56
POLB-215ENST00000524208 DSG2Q14126 1118 aa11.54□□□□□ -0.56
POLB-215ENST00000524208 TBX22Q9Y458 520 aa11.54□□□□□ -0.56
POLB-215ENST00000524208 PRAG1Q86YV5 1406 aa11.53□□□□□ -0.56
POLB-215ENST00000524208 C2orf72A6NCS6 295 aa11.53□□□□□ -0.56
POLB-215ENST00000524208 KIF3CO14782 793 aa11.53□□□□□ -0.56
POLB-215ENST00000524208 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.53□□□□□ -0.56
POLB-215ENST00000524208 MPHOSPH9Q99550 1183 aa11.53□□□□□ -0.56
POLB-215ENST00000524208 MED1Q15648 1581 aaPredicted RBP11.53□□□□□ -0.56
POLB-215ENST00000524208 ROBO1Q9Y6N7 1651 aa11.52□□□□□ -0.56
POLB-215ENST00000524208 CCDC144AA2RUR9 1427 aa11.52□□□□□ -0.56
POLB-215ENST00000524208 ARIH1Q9Y4X5 557 aaPredicted RBP11.52□□□□□ -0.57
POLB-215ENST00000524208 NALCNQ8IZF0 1738 aa11.52□□□□□ -0.57
POLB-215ENST00000524208 POTEB3A0JP26 581 aa11.51□□□□□ -0.57
POLB-215ENST00000524208 POTEBQ6S5H4 581 aa11.51□□□□□ -0.57
POLB-215ENST00000524208 KRTAP3-3Q9BYR6 98 aa11.51□□□□□ -0.57
POLB-215ENST00000524208 KRTAP3-2Q9BYR7 98 aa11.51□□□□□ -0.57
POLB-215ENST00000524208 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.5□□□□□ -0.57
POLB-215ENST00000524208 TOM1O60784 492 aa11.5□□□□□ -0.57
POLB-215ENST00000524208 ZNF326Q5BKZ1 582 aaKnown RBP11.5□□□□□ -0.57
POLB-215ENST00000524208 PROSER2Q86WR7 435 aaPredicted RBP11.5□□□□□ -0.57
POLB-215ENST00000524208 PTCH1Q13635 1447 aa11.5□□□□□ -0.57
POLB-215ENST00000524208 NRXN1Q9ULB1 1477 aa11.5□□□□□ -0.57
POLB-215ENST00000524208 PLPP6Q8IY26 295 aa11.49□□□□□ -0.57
POLB-215ENST00000524208 PIK3C2GO75747 1445 aa11.49□□□□□ -0.57
POLB-215ENST00000524208 FAM135BQ49AJ0 1406 aa11.49□□□□□ -0.57
POLB-215ENST00000524208 ADGRF5Q8IZF2 1346 aa11.48□□□□□ -0.57
POLB-215ENST00000524208 MSH6P52701 1360 aa11.48□□□□□ -0.57
POLB-215ENST00000524208 ROBO2Q9HCK4 1378 aa11.48□□□□□ -0.57
POLB-215ENST00000524208 NCOA3Q9Y6Q9 1424 aa11.48□□□□□ -0.57
POLB-215ENST00000524208 COL16A1Q07092 1604 aaPredicted RBP11.48□□□□□ -0.57
POLB-215ENST00000524208 MYOM2P54296 1465 aa11.47□□□□□ -0.57
POLB-215ENST00000524208 ADGRL3Q9HAR2 1447 aa11.47□□□□□ -0.57
POLB-215ENST00000524208 ANKRD30BQ9BXX2 1392 aa11.47□□□□□ -0.57
POLB-215ENST00000524208 TMEM92Q6UXU6 159 aa11.47□□□□□ -0.57
POLB-215ENST00000524208 DCCP43146 1447 aa11.46□□□□□ -0.57
POLB-215ENST00000524208 HDGFP51858 240 aaKnown RBP11.46□□□□□ -0.57
POLB-215ENST00000524208 AMOTL2Q9Y2J4 779 aa11.46□□□□□ -0.57
POLB-215ENST00000524208 AHDC1Q5TGY3 1603 aaPredicted RBP11.46□□□□□ -0.58
POLB-215ENST00000524208 MST1RQ04912 1400 aa11.45□□□□□ -0.58
POLB-215ENST00000524208 DISP3Q9P2K9 1392 aa11.45□□□□□ -0.58
POLB-215ENST00000524208 TULP1O00294 542 aaPredicted RBP11.45□□□□□ -0.58
POLB-215ENST00000524208 ZNF710Q8N1W2 664 aa11.45□□□□□ -0.58
POLB-215ENST00000524208 TECPR2O15040 1411 aa11.44□□□□□ -0.58
POLB-215ENST00000524208 KNDC1Q76NI1 1749 aa11.44□□□□□ -0.58
POLB-215ENST00000524208 RPGRIP1LQ68CZ1 1315 aa11.44□□□□□ -0.58
POLB-215ENST00000524208 ILDR2Q71H61 639 aa11.44□□□□□ -0.58
POLB-215ENST00000524208 EMILIN3Q9NT22 766 aa11.43□□□□□ -0.58
POLB-215ENST00000524208 ADGRB1O14514 1584 aa11.42□□□□□ -0.58
POLB-215ENST00000524208 HOXB3P14651 431 aaPredicted RBP11.42□□□□□ -0.58
POLB-215ENST00000524208 TPRNQ4KMQ1 711 aa11.42□□□□□ -0.58
POLB-215ENST00000524208 PHLPP1O60346 1717 aa11.42□□□□□ -0.58
POLB-215ENST00000524208 NHSL1Q5SYE7 1610 aa11.42□□□□□ -0.58
POLB-215ENST00000524208 CDC42BPGQ6DT37 1551 aa11.41□□□□□ -0.58
POLB-215ENST00000524208 RGL3Q3MIN7 710 aa11.41□□□□□ -0.58
POLB-215ENST00000524208 PLEKHH1Q9ULM0 1364 aa11.41□□□□□ -0.58
POLB-215ENST00000524208 LRP6O75581 1613 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms