RNA–Protein interactions for RNA: ENST00000522192.5

EBF1-208, Transcript of early B cell factor 1, humanhuman

TSL 5

Gene EBF1, Length 1,911 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-208ENST00000522192 UPF2Q9HAU5 1272 aaKnown RBP19■□□□□ 0.63
EBF1-208ENST00000522192 KIAA1210Q9ULL0 1709 aa18.99■□□□□ 0.63
EBF1-208ENST00000522192 USP19O94966 1318 aa18.99■□□□□ 0.63
EBF1-208ENST00000522192 PPLO60437 1756 aa18.98■□□□□ 0.63
EBF1-208ENST00000522192 SKAP1Q86WV1 359 aa18.98■□□□□ 0.63
EBF1-208ENST00000522192 RGS3P49796 1198 aa18.97■□□□□ 0.63
EBF1-208ENST00000522192 PMFBP1Q8TBY8 1022 aa18.97■□□□□ 0.63
EBF1-208ENST00000522192 PIK3R4Q99570 1358 aa18.97■□□□□ 0.63
EBF1-208ENST00000522192 PTPRUQ92729 1446 aa18.95■□□□□ 0.62
EBF1-208ENST00000522192 RGL3Q3MIN7 710 aa18.95■□□□□ 0.62
EBF1-208ENST00000522192 CLUAP1Q96AJ1 413 aa18.95■□□□□ 0.62
EBF1-208ENST00000522192 MYOM1P52179 1685 aa18.95■□□□□ 0.62
EBF1-208ENST00000522192 NCBP3Q53F19 620 aaKnown RBP18.94■□□□□ 0.62
EBF1-208ENST00000522192 ISY1Q9ULR0 285 aaKnown RBP18.94■□□□□ 0.62
EBF1-208ENST00000522192 RPGRIP1LQ68CZ1 1315 aa18.94■□□□□ 0.62
EBF1-208ENST00000522192 VGFO15240 615 aaPredicted RBP18.93■□□□□ 0.62
EBF1-208ENST00000522192 AMOTL2Q9Y2J4 779 aa18.93■□□□□ 0.62
EBF1-208ENST00000522192 METP08581 1390 aa18.93■□□□□ 0.62
EBF1-208ENST00000522192 XRN1Q8IZH2 1706 aaKnown RBP18.93■□□□□ 0.62
EBF1-208ENST00000522192 HSPA1LP34931 641 aa18.92■□□□□ 0.62
EBF1-208ENST00000522192 ANTXR1Q9H6X2 564 aa18.92■□□□□ 0.62
EBF1-208ENST00000522192 IFT172Q9UG01 1749 aa18.92■□□□□ 0.62
EBF1-208ENST00000522192 SETD1AO15047 1707 aaKnown RBP18.92■□□□□ 0.62
EBF1-208ENST00000522192 MSH6P52701 1360 aa18.91■□□□□ 0.62
EBF1-208ENST00000522192 CENPJQ9HC77 1338 aaPredicted RBP18.91■□□□□ 0.62
EBF1-208ENST00000522192 EIF5BO60841 1220 aaKnown RBP18.9■□□□□ 0.62
EBF1-208ENST00000522192 POLR3AO14802 1390 aaPredicted RBP18.9■□□□□ 0.62
EBF1-208ENST00000522192 GLIPR1L2Q4G1C9 344 aa18.9■□□□□ 0.62
EBF1-208ENST00000522192 TBC1D32Q96NH3 1257 aa18.9■□□□□ 0.62
EBF1-208ENST00000522192 C14orf37Q86TY3 774 aa18.88■□□□□ 0.61
EBF1-208ENST00000522192 IGHDP01880 384 aa18.87■□□□□ 0.61
EBF1-208ENST00000522192 NCOA3Q9Y6Q9 1424 aa18.87■□□□□ 0.61
EBF1-208ENST00000522192 FSD2A1L4K1 749 aa18.86■□□□□ 0.61
EBF1-208ENST00000522192 POGKQ9P215 609 aa18.86■□□□□ 0.61
EBF1-208ENST00000522192 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.86■□□□□ 0.61
EBF1-208ENST00000522192 ROBO1Q9Y6N7 1651 aa18.86■□□□□ 0.61
EBF1-208ENST00000522192 ADGRF5Q8IZF2 1346 aa18.86■□□□□ 0.61
EBF1-208ENST00000522192 GOLGA6L3A6NEY3 463 aa18.85■□□□□ 0.61
EBF1-208ENST00000522192 APAF1O14727 1248 aa18.85■□□□□ 0.61
EBF1-208ENST00000522192 SBNO2Q9Y2G9 1366 aa18.84■□□□□ 0.61
EBF1-208ENST00000522192 BCAR3O75815 825 aa18.84■□□□□ 0.61
EBF1-208ENST00000522192 CANXP27824 592 aaKnown RBP18.84■□□□□ 0.61
EBF1-208ENST00000522192 CLCN1P35523 988 aa18.83■□□□□ 0.6
EBF1-208ENST00000522192 RWDD1Q9H446 243 aaPredicted RBP18.83■□□□□ 0.6
EBF1-208ENST00000522192 FAM135BQ49AJ0 1406 aa18.83■□□□□ 0.6
EBF1-208ENST00000522192 MYOM2P54296 1465 aa18.82■□□□□ 0.6
EBF1-208ENST00000522192 PTMSP20962 102 aa18.81■□□□□ 0.6
EBF1-208ENST00000522192 WDR63Q8IWG1 891 aa18.81■□□□□ 0.6
EBF1-208ENST00000522192 C19orf44Q9H6X5 657 aa18.81■□□□□ 0.6
EBF1-208ENST00000522192 CHMP5Q9NZZ3 219 aa18.81■□□□□ 0.6
EBF1-208ENST00000522192 NALCNQ8IZF0 1738 aa18.8■□□□□ 0.6
EBF1-208ENST00000522192 SLAIN2Q9P270 581 aa18.8■□□□□ 0.6
EBF1-208ENST00000522192 CT47B1P0C2W7 299 aaPredicted RBP18.8■□□□□ 0.6
EBF1-208ENST00000522192 MCM4P33991 863 aa18.8■□□□□ 0.6
EBF1-208ENST00000522192 MRE11P49959 708 aa18.8■□□□□ 0.6
EBF1-208ENST00000522192 CCDC27Q2M243 656 aa18.8■□□□□ 0.6
EBF1-208ENST00000522192 SPINK5Q9NQ38 1064 aaPredicted RBP18.8■□□□□ 0.6
EBF1-208ENST00000522192 PTCH1Q13635 1447 aa18.79■□□□□ 0.6
EBF1-208ENST00000522192 DDX11L8A8MPP1 907 aa18.78■□□□□ 0.6
EBF1-208ENST00000522192 ATF3P18847 181 aa18.78■□□□□ 0.6
EBF1-208ENST00000522192 CADPS2Q86UW7 1296 aa18.78■□□□□ 0.6
EBF1-208ENST00000522192 WWC1Q8IX03 1113 aa18.78■□□□□ 0.6
EBF1-208ENST00000522192 PHF23Q9BUL5 403 aaPredicted RBP18.78■□□□□ 0.6
EBF1-208ENST00000522192 TBC1D2Q9BYX2 928 aa18.78■□□□□ 0.6
EBF1-208ENST00000522192 RRAGDQ9NQL2 400 aaPredicted RBP18.78■□□□□ 0.6
EBF1-208ENST00000522192 ROBO2Q9HCK4 1378 aa18.78■□□□□ 0.6
EBF1-208ENST00000522192 USP32Q8NFA0 1604 aa18.77■□□□□ 0.6
EBF1-208ENST00000522192 CCDC146Q8IYE0 955 aa18.77■□□□□ 0.6
EBF1-208ENST00000522192 PNNQ9H307 717 aaKnown RBP18.77■□□□□ 0.6
EBF1-208ENST00000522192 DCCP43146 1447 aa18.77■□□□□ 0.6
EBF1-208ENST00000522192 SEC24BO95487 1268 aa18.76■□□□□ 0.59
EBF1-208ENST00000522192 ADGRL3Q9HAR2 1447 aa18.76■□□□□ 0.59
EBF1-208ENST00000522192 RARSP54136 660 aaKnown RBP18.76■□□□□ 0.59
EBF1-208ENST00000522192 SLKQ9H2G2 1235 aaPredicted RBP18.76■□□□□ 0.59
EBF1-208ENST00000522192 COG6Q9Y2V7 657 aa18.76■□□□□ 0.59
EBF1-208ENST00000522192 NRXN1Q9ULB1 1477 aa18.76■□□□□ 0.59
EBF1-208ENST00000522192 RUNDC1Q96C34 613 aa18.75■□□□□ 0.59
EBF1-208ENST00000522192 PHLPP1O60346 1717 aa18.74■□□□□ 0.59
EBF1-208ENST00000522192 MED1Q15648 1581 aaPredicted RBP18.74■□□□□ 0.59
EBF1-208ENST00000522192 RRP9O43818 475 aaKnown RBP18.74■□□□□ 0.59
EBF1-208ENST00000522192 XRCC6P12956 609 aaKnown RBP eCLIP18.74■□□□□ 0.59
EBF1-208ENST00000522192 TMEM132EQ6IEE7 984 aa18.74■□□□□ 0.59
EBF1-208ENST00000522192 SHPRHQ149N8 1683 aa18.73■□□□□ 0.59
EBF1-208ENST00000522192 PANK1Q8TE04 598 aa18.72■□□□□ 0.59
EBF1-208ENST00000522192 STK26Q9P289 416 aa18.72■□□□□ 0.59
EBF1-208ENST00000522192 CIZ1Q9ULV3 898 aaPredicted RBP18.72■□□□□ 0.59
EBF1-208ENST00000522192 PDZRN3Q9UPQ7 1066 aa18.72■□□□□ 0.59
EBF1-208ENST00000522192 KNDC1Q76NI1 1749 aa18.72■□□□□ 0.59
EBF1-208ENST00000522192 MYH16Q9H6N6 1097 aa18.72■□□□□ 0.59
EBF1-208ENST00000522192 MST1RQ04912 1400 aa18.71■□□□□ 0.59
EBF1-208ENST00000522192 CFAP70Q5T0N1 1121 aa18.7■□□□□ 0.58
EBF1-208ENST00000522192 C14orf93Q9H972 538 aaKnown RBP18.7■□□□□ 0.58
EBF1-208ENST00000522192 TECPR2O15040 1411 aa18.7■□□□□ 0.58
EBF1-208ENST00000522192 TRAK2O60296 914 aa18.69■□□□□ 0.58
EBF1-208ENST00000522192 YTHDC2Q9H6S0 1430 aaKnown RBP18.69■□□□□ 0.58
EBF1-208ENST00000522192 HDAC1Q13547 482 aaPredicted RBP18.68■□□□□ 0.58
EBF1-208ENST00000522192 SKOR2Q2VWA4 1001 aaPredicted RBP18.68■□□□□ 0.58
EBF1-208ENST00000522192 C22orf23Q9BZE7 217 aa18.68■□□□□ 0.58
EBF1-208ENST00000522192 COL16A1Q07092 1604 aaPredicted RBP18.68■□□□□ 0.58
EBF1-208ENST00000522192 MVPQ14764 893 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms