RNA–Protein interactions for RNA: ENST00000520860.1

SRGAP3-212, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-212ENST00000520860 SAFB2Q14151 953 aaKnown RBP eCLIP19.73■□□□□ 0.75
SRGAP3-212ENST00000520860 NBPF8Q3BBV2 869 aa19.73■□□□□ 0.75
SRGAP3-212ENST00000520860 NBPF14Q5TI25 921 aa19.73■□□□□ 0.75
SRGAP3-212ENST00000520860 SPATA31E1Q6ZUB1 1445 aa19.73■□□□□ 0.75
SRGAP3-212ENST00000520860 ANKARQ7Z5J8 1434 aa19.73■□□□□ 0.75
SRGAP3-212ENST00000520860 PRDM11Q9NQV5 511 aa19.72■□□□□ 0.75
SRGAP3-212ENST00000520860 DHX57Q6P158 1386 aaKnown RBP19.71■□□□□ 0.75
SRGAP3-212ENST00000520860 PRAM1Q96QH2 718 aa19.7■□□□□ 0.74
SRGAP3-212ENST00000520860 SPON1Q9HCB6 807 aa19.7■□□□□ 0.74
SRGAP3-212ENST00000520860 TRPM3Q9HCF6 1732 aaPredicted RBP19.69■□□□□ 0.74
SRGAP3-212ENST00000520860 SPATA31A1Q5TZJ5 1347 aa19.69■□□□□ 0.74
SRGAP3-212ENST00000520860 C14orf93Q9H972 538 aaKnown RBP19.68■□□□□ 0.74
SRGAP3-212ENST00000520860 POGKQ9P215 609 aa19.68■□□□□ 0.74
SRGAP3-212ENST00000520860 ALS2Q96Q42 1657 aa19.68■□□□□ 0.74
SRGAP3-212ENST00000520860 NINLQ9Y2I6 1382 aa19.68■□□□□ 0.74
SRGAP3-212ENST00000520860 STRN4Q9NRL3 753 aa19.66■□□□□ 0.74
SRGAP3-212ENST00000520860 ACIN1Q9UKV3 1341 aaKnown RBP19.66■□□□□ 0.74
SRGAP3-212ENST00000520860 RREB1Q92766 1687 aa19.65■□□□□ 0.74
SRGAP3-212ENST00000520860 KCNQ2O43526 872 aa19.65■□□□□ 0.74
SRGAP3-212ENST00000520860 PDE3BQ13370 1112 aa19.65■□□□□ 0.74
SRGAP3-212ENST00000520860 NUP188Q5SRE5 1749 aa19.65■□□□□ 0.74
SRGAP3-212ENST00000520860 PAK3O75914 559 aaPredicted RBP19.64■□□□□ 0.73
SRGAP3-212ENST00000520860 CFAP70Q5T0N1 1121 aa19.64■□□□□ 0.73
SRGAP3-212ENST00000520860 EIF3AQ14152 1382 aaKnown RBP19.64■□□□□ 0.73
SRGAP3-212ENST00000520860 KIAA0232Q92628 1395 aa19.62■□□□□ 0.73
SRGAP3-212ENST00000520860 CHRNA2Q15822 529 aa19.62■□□□□ 0.73
SRGAP3-212ENST00000520860 NGDNQ8NEJ9 315 aaKnown RBP19.62■□□□□ 0.73
SRGAP3-212ENST00000520860 USP35Q9P2H5 1018 aa19.62■□□□□ 0.73
SRGAP3-212ENST00000520860 DLC1Q96QB1 1528 aa19.61■□□□□ 0.73
SRGAP3-212ENST00000520860 CRYBG1Q9Y4K1 1723 aa19.6■□□□□ 0.73
SRGAP3-212ENST00000520860 BARGINQ6ZT62 677 aa19.6■□□□□ 0.73
SRGAP3-212ENST00000520860 HIRIP3Q9BW71 556 aaPredicted RBP19.6■□□□□ 0.73
SRGAP3-212ENST00000520860 EVA1CP58658 441 aa19.59■□□□□ 0.73
SRGAP3-212ENST00000520860 PRR36Q9H6K5 1346 aa19.58■□□□□ 0.73
SRGAP3-212ENST00000520860 MINK1Q8N4C8 1332 aaPredicted RBP19.57■□□□□ 0.72
SRGAP3-212ENST00000520860 TULP4Q9NRJ4 1543 aa19.57■□□□□ 0.72
SRGAP3-212ENST00000520860 ZC3H6P61129 1189 aaKnown RBP19.57■□□□□ 0.72
SRGAP3-212ENST00000520860 MPHOSPH9Q99550 1183 aa19.56■□□□□ 0.72
SRGAP3-212ENST00000520860 SSH2Q76I76 1423 aa19.56■□□□□ 0.72
SRGAP3-212ENST00000520860 TCP11L2Q8N4U5 519 aa19.55■□□□□ 0.72
SRGAP3-212ENST00000520860 ZNF784Q8NCA9 323 aaPredicted RBP19.55■□□□□ 0.72
SRGAP3-212ENST00000520860 WASLO00401 505 aaPredicted RBP19.54■□□□□ 0.72
SRGAP3-212ENST00000520860 TRAK1Q9UPV9 953 aa19.54■□□□□ 0.72
SRGAP3-212ENST00000520860 CAMTA1Q9Y6Y1 1673 aa19.54■□□□□ 0.72
SRGAP3-212ENST00000520860 SENP3-EIF4A1A0A087X0R7 540 aa19.53■□□□□ 0.72
SRGAP3-212ENST00000520860 C11orf95C9JLR9 678 aaPredicted RBP19.53■□□□□ 0.72
SRGAP3-212ENST00000520860 PHRF1Q9P1Y6 1649 aaKnown RBP19.52■□□□□ 0.72
SRGAP3-212ENST00000520860 LARP1Q6PKG0 1096 aaKnown RBP19.51■□□□□ 0.71
SRGAP3-212ENST00000520860 ATP7BP35670 1465 aa19.51■□□□□ 0.71
SRGAP3-212ENST00000520860 NUTM2GQ5VZR2 741 aa19.5■□□□□ 0.71
SRGAP3-212ENST00000520860 THRAP3Q9Y2W1 955 aaKnown RBP19.5■□□□□ 0.71
SRGAP3-212ENST00000520860 NRKQ7Z2Y5 1582 aa19.49■□□□□ 0.71
SRGAP3-212ENST00000520860 ADGRB1O14514 1584 aa19.48■□□□□ 0.71
SRGAP3-212ENST00000520860 PLSCR1O15162 318 aa19.47■□□□□ 0.71
SRGAP3-212ENST00000520860 ANO8Q9HCE9 1232 aaPredicted RBP19.47■□□□□ 0.71
SRGAP3-212ENST00000520860 OVOS2A0A0G2JMS6 1433 aa19.47■□□□□ 0.71
SRGAP3-212ENST00000520860 OVOS2A0A0J9YW53 1432 aa19.47■□□□□ 0.71
SRGAP3-212ENST00000520860 OVOS2Q6IE36 1432 aa19.47■□□□□ 0.71
SRGAP3-212ENST00000520860 ITSN1Q15811 1721 aa19.46■□□□□ 0.71
SRGAP3-212ENST00000520860 ZBTB7AO95365 584 aa19.45■□□□□ 0.7
SRGAP3-212ENST00000520860 NUDT16Q96DE0 195 aaKnown RBP19.45■□□□□ 0.7
SRGAP3-212ENST00000520860 BCL11BQ9C0K0 894 aaPredicted RBP19.45■□□□□ 0.7
SRGAP3-212ENST00000520860 RGPD3A6NKT7 1758 aaPredicted RBP19.44■□□□□ 0.7
SRGAP3-212ENST00000520860 RGPD4Q7Z3J3 1758 aa19.44■□□□□ 0.7
SRGAP3-212ENST00000520860 C1QTNF8P60827 252 aa19.44■□□□□ 0.7
SRGAP3-212ENST00000520860 CASZ1Q86V15 1759 aa19.44■□□□□ 0.7
SRGAP3-212ENST00000520860 CPDO75976 1380 aa19.44■□□□□ 0.7
SRGAP3-212ENST00000520860 PARP4Q9UKK3 1724 aaKnown RBP19.43■□□□□ 0.7
SRGAP3-212ENST00000520860 IFFO2Q5TF58 517 aa19.42■□□□□ 0.7
SRGAP3-212ENST00000520860 LMO7Q8WWI1 1683 aa19.42■□□□□ 0.7
SRGAP3-212ENST00000520860 MYOM1P52179 1685 aa19.41■□□□□ 0.7
SRGAP3-212ENST00000520860 PTGER2P43116 358 aa19.41■□□□□ 0.7
SRGAP3-212ENST00000520860 ABTB2Q8N961 1025 aa19.41■□□□□ 0.7
SRGAP3-212ENST00000520860 PDGFDQ9GZP0 370 aaPredicted RBP19.41■□□□□ 0.7
SRGAP3-212ENST00000520860 ATF5Q9Y2D1 282 aaPredicted RBP19.41■□□□□ 0.7
SRGAP3-212ENST00000520860 SYT17Q9BSW7 474 aa19.4■□□□□ 0.7
SRGAP3-212ENST00000520860 CHD4Q14839 1912 aa19.39■□□□□ 0.7
SRGAP3-212ENST00000520860 FHDC1Q9C0D6 1143 aaPredicted RBP19.39■□□□□ 0.69
SRGAP3-212ENST00000520860 USP19O94966 1318 aa19.39■□□□□ 0.69
SRGAP3-212ENST00000520860 ACEP12821 1306 aa19.39■□□□□ 0.69
SRGAP3-212ENST00000520860 POLR3AO14802 1390 aaPredicted RBP19.39■□□□□ 0.69
SRGAP3-212ENST00000520860 CRB1P82279 1406 aa19.39■□□□□ 0.69
SRGAP3-212ENST00000520860 COL5A2P05997 1499 aaPredicted RBP19.39■□□□□ 0.69
SRGAP3-212ENST00000520860 PEAK1Q9H792 1746 aa19.39■□□□□ 0.69
SRGAP3-212ENST00000520860 DDB1Q16531 1140 aa19.38■□□□□ 0.69
SRGAP3-212ENST00000520860 STK32BQ9NY57 414 aa19.38■□□□□ 0.69
SRGAP3-212ENST00000520860 NLRP13Q86W25 1043 aa19.37■□□□□ 0.69
SRGAP3-212ENST00000520860 SBF2Q86WG5 1849 aa19.37■□□□□ 0.69
SRGAP3-212ENST00000520860 GCP02774 474 aa19.36■□□□□ 0.69
SRGAP3-212ENST00000520860 KDM2AQ9Y2K7 1162 aa19.36■□□□□ 0.69
SRGAP3-212ENST00000520860 CCDC61Q9Y6R9 512 aa19.36■□□□□ 0.69
SRGAP3-212ENST00000520860 PTF1AQ7RTS3 328 aa19.35■□□□□ 0.69
SRGAP3-212ENST00000520860 PROM2Q8N271 834 aa19.35■□□□□ 0.69
SRGAP3-212ENST00000520860 CDK19Q9BWU1 502 aa19.35■□□□□ 0.69
SRGAP3-212ENST00000520860 LRRC37A3O60309 1634 aa19.34■□□□□ 0.69
SRGAP3-212ENST00000520860 ZBTB7CA1YPR0 619 aa19.34■□□□□ 0.69
SRGAP3-212ENST00000520860 MTFR1LQ9H019 292 aa19.34■□□□□ 0.69
SRGAP3-212ENST00000520860 PLEKHG3A1L390 1219 aa19.33■□□□□ 0.68
SRGAP3-212ENST00000520860 SLC15A2Q16348 729 aa19.33■□□□□ 0.68
SRGAP3-212ENST00000520860 ARHGEF28Q8N1W1 1705 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms