RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 KIF27Q86VH2 1401 aa10.54□□□□□ -0.72
CLK4-202ENST00000519132 CUX2O14529 1486 aa10.54□□□□□ -0.72
CLK4-202ENST00000519132 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.54□□□□□ -0.72
CLK4-202ENST00000519132 USP17L3A6NCW0 530 aa10.54□□□□□ -0.72
CLK4-202ENST00000519132 USP17L4A6NCW7 530 aa10.54□□□□□ -0.72
CLK4-202ENST00000519132 USP17L2Q6R6M4 530 aa10.54□□□□□ -0.72
CLK4-202ENST00000519132 USP17L1Q7RTZ2 530 aa10.54□□□□□ -0.72
CLK4-202ENST00000519132 RUSC2Q8N2Y8 1516 aa10.54□□□□□ -0.72
CLK4-202ENST00000519132 SLC34A2O95436 690 aa10.53□□□□□ -0.72
CLK4-202ENST00000519132 FBXO45P0C2W1 286 aa10.53□□□□□ -0.72
CLK4-202ENST00000519132 MTMR3Q13615 1198 aa10.53□□□□□ -0.72
CLK4-202ENST00000519132 SOWAHDA6NJG2 315 aa10.53□□□□□ -0.72
CLK4-202ENST00000519132 CCER1Q8TC90 406 aaPredicted RBP10.53□□□□□ -0.72
CLK4-202ENST00000519132 ABCA5Q8WWZ7 1642 aa10.53□□□□□ -0.72
CLK4-202ENST00000519132 C6orf229H3BNL8 230 aa10.53□□□□□ -0.72
CLK4-202ENST00000519132 MARSP56192 900 aaKnown RBP10.53□□□□□ -0.72
CLK4-202ENST00000519132 ZNF211Q13398 564 aaPredicted RBP10.53□□□□□ -0.72
CLK4-202ENST00000519132 PROX2Q3B8N5 592 aa10.53□□□□□ -0.72
CLK4-202ENST00000519132 NPAS4Q8IUM7 802 aa10.53□□□□□ -0.72
CLK4-202ENST00000519132 SULF1Q8IWU6 871 aa10.53□□□□□ -0.72
CLK4-202ENST00000519132 IFT140Q96RY7 1462 aa10.52□□□□□ -0.72
CLK4-202ENST00000519132 RAD54L2Q9Y4B4 1467 aa10.52□□□□□ -0.72
CLK4-202ENST00000519132 PNMA3Q9UL41 463 aa10.52□□□□□ -0.72
CLK4-202ENST00000519132 MTMR2Q13614 643 aa10.52□□□□□ -0.73
CLK4-202ENST00000519132 PRPF38BQ5VTL8 546 aaKnown RBP10.52□□□□□ -0.73
CLK4-202ENST00000519132 ASTLQ6HA08 431 aaPredicted RBP10.51□□□□□ -0.73
CLK4-202ENST00000519132 KIF21BO75037 1637 aa10.51□□□□□ -0.73
CLK4-202ENST00000519132 ZNF594Q96JF6 807 aaPredicted RBP10.51□□□□□ -0.73
CLK4-202ENST00000519132 HELBQ8NG08 1087 aaPredicted RBP10.5□□□□□ -0.73
CLK4-202ENST00000519132 CAPN12Q6ZSI9 719 aa10.5□□□□□ -0.73
CLK4-202ENST00000519132 CERKQ8TCT0 537 aa10.5□□□□□ -0.73
CLK4-202ENST00000519132 RECKO95980 971 aa10.49□□□□□ -0.73
CLK4-202ENST00000519132 FUT2Q10981 343 aa10.49□□□□□ -0.73
CLK4-202ENST00000519132 RBM27Q9P2N5 1060 aaKnown RBP10.49□□□□□ -0.73
CLK4-202ENST00000519132 USP17L5A8MUK1 530 aa10.49□□□□□ -0.73
CLK4-202ENST00000519132 SEC24BO95487 1268 aa10.49□□□□□ -0.73
CLK4-202ENST00000519132 SKIP12755 728 aa10.49□□□□□ -0.73
CLK4-202ENST00000519132 HMGB1P09429 215 aaKnown RBP10.48□□□□□ -0.73
CLK4-202ENST00000519132 DNAJB2P25686 324 aa10.48□□□□□ -0.73
CLK4-202ENST00000519132 NCOA4Q13772 614 aa10.48□□□□□ -0.73
CLK4-202ENST00000519132 CCDC125Q86Z20 511 aa10.48□□□□□ -0.73
CLK4-202ENST00000519132 ABL1P00519 1130 aa10.48□□□□□ -0.73
CLK4-202ENST00000519132 C7P10643 843 aa10.48□□□□□ -0.73
CLK4-202ENST00000519132 TSGA10IPQ3SY00 556 aa10.48□□□□□ -0.73
CLK4-202ENST00000519132 USP17L15C9J2P7 530 aa10.47□□□□□ -0.73
CLK4-202ENST00000519132 USP17L10C9JJH3 530 aa10.47□□□□□ -0.73
CLK4-202ENST00000519132 USP17L13C9JLJ4 530 aa10.47□□□□□ -0.73
CLK4-202ENST00000519132 USP17L12C9JPN9 530 aa10.47□□□□□ -0.73
CLK4-202ENST00000519132 USP17L11C9JVI0 530 aa10.47□□□□□ -0.73
CLK4-202ENST00000519132 USP17L21D6R901 530 aa10.47□□□□□ -0.73
CLK4-202ENST00000519132 USP17L18D6R9N7 530 aa10.47□□□□□ -0.73
CLK4-202ENST00000519132 USP17L22D6RA61 530 aa10.47□□□□□ -0.73
CLK4-202ENST00000519132 USP17L17D6RBQ6 530 aa10.47□□□□□ -0.73
CLK4-202ENST00000519132 USP17L19D6RCP7 530 aa10.47□□□□□ -0.73
CLK4-202ENST00000519132 USP17L20D6RJB6 530 aa10.47□□□□□ -0.73
CLK4-202ENST00000519132 USP17L24Q0WX57 530 aa10.47□□□□□ -0.73
CLK4-202ENST00000519132 CUL7Q14999 1698 aa10.47□□□□□ -0.73
CLK4-202ENST00000519132 ERICH3Q5RHP9 1530 aa10.47□□□□□ -0.73
CLK4-202ENST00000519132 GCGRP47871 477 aa10.47□□□□□ -0.73
CLK4-202ENST00000519132 TATDN2Q93075 761 aa10.47□□□□□ -0.73
CLK4-202ENST00000519132 PBRM1Q86U86 1689 aa10.47□□□□□ -0.73
CLK4-202ENST00000519132 TSNAXIP1Q2TAA8 658 aa10.47□□□□□ -0.73
CLK4-202ENST00000519132 MKRN1Q9UHC7 482 aaKnown RBP10.47□□□□□ -0.73
CLK4-202ENST00000519132 GJA5P36382 358 aa10.46□□□□□ -0.73
CLK4-202ENST00000519132 ARSIQ5FYB1 569 aa10.46□□□□□ -0.73
CLK4-202ENST00000519132 PRXQ9BXM0 1461 aa10.46□□□□□ -0.74
CLK4-202ENST00000519132 GAPVD1Q14C86 1478 aa10.45□□□□□ -0.74
CLK4-202ENST00000519132 PRMT3O60678 531 aa10.45□□□□□ -0.74
CLK4-202ENST00000519132 C3orf67Q6ZVT6 689 aa10.45□□□□□ -0.74
CLK4-202ENST00000519132 PTK7Q13308 1070 aa10.45□□□□□ -0.74
CLK4-202ENST00000519132 SIRT1Q96EB6 747 aa10.45□□□□□ -0.74
CLK4-202ENST00000519132 IER5LQ5T953 404 aa10.44□□□□□ -0.74
CLK4-202ENST00000519132 IGF1RP08069 1367 aa10.44□□□□□ -0.74
CLK4-202ENST00000519132 CENPBP07199 599 aaPredicted RBP10.44□□□□□ -0.74
CLK4-202ENST00000519132 RASA1P20936 1047 aa10.44□□□□□ -0.74
CLK4-202ENST00000519132 EIF4G3O43432 1585 aaKnown RBP10.44□□□□□ -0.74
CLK4-202ENST00000519132 ATP2B4P23634 1241 aa10.44□□□□□ -0.74
CLK4-202ENST00000519132 RNF19AQ9NV58 838 aa10.44□□□□□ -0.74
CLK4-202ENST00000519132 PPP1R3GB7ZBB8 358 aa10.43□□□□□ -0.74
CLK4-202ENST00000519132 FAM161BQ96MY7 647 aa10.43□□□□□ -0.74
CLK4-202ENST00000519132 GOLGA3Q08378 1498 aa10.43□□□□□ -0.74
CLK4-202ENST00000519132 ARID4AP29374 1257 aaPredicted RBP10.43□□□□□ -0.74
CLK4-202ENST00000519132 KIAA1024Q9UPX6 916 aa10.42□□□□□ -0.74
CLK4-202ENST00000519132 H3BRB1 525 aa10.42□□□□□ -0.74
CLK4-202ENST00000519132 GIMAP6Q6P9H5 292 aa10.42□□□□□ -0.74
CLK4-202ENST00000519132 SLF2Q8IX21 1173 aa10.42□□□□□ -0.74
CLK4-202ENST00000519132 DHX37Q8IY37 1157 aaKnown RBP10.42□□□□□ -0.74
CLK4-202ENST00000519132 PRIMPOLQ96LW4 560 aa10.42□□□□□ -0.74
CLK4-202ENST00000519132 TUT1Q9H6E5 874 aaKnown RBP10.42□□□□□ -0.74
CLK4-202ENST00000519132 CLDN10P78369 228 aa10.42□□□□□ -0.74
CLK4-202ENST00000519132 ZNF662Q6ZS27 426 aa10.42□□□□□ -0.74
CLK4-202ENST00000519132 TDRD9Q8NDG6 1382 aaKnown RBP10.41□□□□□ -0.74
CLK4-202ENST00000519132 ZNF608Q9ULD9 1512 aaPredicted RBP10.41□□□□□ -0.74
CLK4-202ENST00000519132 PUS10Q3MIT2 529 aaKnown RBP10.41□□□□□ -0.74
CLK4-202ENST00000519132 MKNK1Q9BUB5 465 aa10.41□□□□□ -0.74
CLK4-202ENST00000519132 DPYDQ12882 1025 aa10.4□□□□□ -0.74
CLK4-202ENST00000519132 GRIN2BQ13224 1484 aa10.4□□□□□ -0.74
CLK4-202ENST00000519132 NAALADL2Q58DX5 795 aa10.4□□□□□ -0.74
CLK4-202ENST00000519132 SREK1Q8WXA9 508 aaKnown RBP10.4□□□□□ -0.74
CLK4-202ENST00000519132 ELOAQ14241 798 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms