RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 GLMNQ92990 594 aa7.92□□□□□ -1.14
HMGB1P23-201ENST00000518743 AXIN2Q9Y2T1 843 aa7.92□□□□□ -1.14
HMGB1P23-201ENST00000518743 FAM198AQ9UFP1 575 aa7.91□□□□□ -1.14
HMGB1P23-201ENST00000518743 IQSEC2Q5JU85 1478 aa7.91□□□□□ -1.14
HMGB1P23-201ENST00000518743 KIAA0586Q9BVV6 1533 aa7.91□□□□□ -1.14
HMGB1P23-201ENST00000518743 CUL7Q14999 1698 aa7.91□□□□□ -1.14
HMGB1P23-201ENST00000518743 SRCAPQ6ZRS2 3230 aa7.9□□□□□ -1.14
HMGB1P23-201ENST00000518743 YEATS2Q9ULM3 1422 aa7.9□□□□□ -1.14
HMGB1P23-201ENST00000518743 FDX1P10109 184 aa7.9□□□□□ -1.14
HMGB1P23-201ENST00000518743 HSPA1LP34931 641 aa7.9□□□□□ -1.14
HMGB1P23-201ENST00000518743 GCGRP47871 477 aa7.9□□□□□ -1.14
HMGB1P23-201ENST00000518743 QPCTQ16769 361 aa7.9□□□□□ -1.14
HMGB1P23-201ENST00000518743 POTEEQ6S8J3 1075 aa7.9□□□□□ -1.14
HMGB1P23-201ENST00000518743 ABCA5Q8WWZ7 1642 aa7.89□□□□□ -1.15
HMGB1P23-201ENST00000518743 HOXA2O43364 376 aa7.89□□□□□ -1.15
HMGB1P23-201ENST00000518743 NDUFV2P19404 249 aa7.89□□□□□ -1.15
HMGB1P23-201ENST00000518743 SOX11P35716 441 aa7.89□□□□□ -1.15
HMGB1P23-201ENST00000518743 ANKRD13DQ6ZTN6 518 aa7.89□□□□□ -1.15
HMGB1P23-201ENST00000518743 PNMA1Q8ND90 353 aa7.89□□□□□ -1.15
HMGB1P23-201ENST00000518743 NECTIN2Q92692 538 aa7.89□□□□□ -1.15
HMGB1P23-201ENST00000518743 TBC1D2BQ9UPU7 963 aa7.89□□□□□ -1.15
HMGB1P23-201ENST00000518743 EPRSP07814 1512 aaKnown RBP7.88□□□□□ -1.15
HMGB1P23-201ENST00000518743 PIP4K2BP78356 416 aa7.88□□□□□ -1.15
HMGB1P23-201ENST00000518743 MTMR2Q13614 643 aa7.88□□□□□ -1.15
HMGB1P23-201ENST00000518743 AEBP1Q8IUX7 1158 aa7.88□□□□□ -1.15
HMGB1P23-201ENST00000518743 RETREG2Q8NC44 543 aa7.88□□□□□ -1.15
HMGB1P23-201ENST00000518743 PBXIP1Q96AQ6 731 aa7.88□□□□□ -1.15
HMGB1P23-201ENST00000518743 USTQ9Y2C2 406 aa7.88□□□□□ -1.15
HMGB1P23-201ENST00000518743 PCDHB15Q9Y5E8 787 aa7.88□□□□□ -1.15
HMGB1P23-201ENST00000518743 ABCC2Q92887 1545 aa7.88□□□□□ -1.15
HMGB1P23-201ENST00000518743 STRCQ7RTU9 1775 aa7.87□□□□□ -1.15
HMGB1P23-201ENST00000518743 MMRN1Q13201 1228 aa7.87□□□□□ -1.15
HMGB1P23-201ENST00000518743 RTL5Q5HYW3 569 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P23-201ENST00000518743 CCDC88BA6NC98 1476 aa7.87□□□□□ -1.15
HMGB1P23-201ENST00000518743 FBXO31Q5XUX0 539 aaPredicted RBP7.86□□□□□ -1.15
HMGB1P23-201ENST00000518743 PTPRTO14522 1441 aa7.86□□□□□ -1.15
HMGB1P23-201ENST00000518743 LTBP4Q8N2S1 1624 aa7.85□□□□□ -1.15
HMGB1P23-201ENST00000518743 PSEN2P49810 448 aa7.85□□□□□ -1.15
HMGB1P23-201ENST00000518743 LSM11P83369 360 aaKnown RBP eCLIP7.85□□□□□ -1.15
HMGB1P23-201ENST00000518743 SLF2Q8IX21 1173 aa7.85□□□□□ -1.15
HMGB1P23-201ENST00000518743 FHAD1B1AJZ9 1412 aa7.85□□□□□ -1.15
HMGB1P23-201ENST00000518743 PREX1Q8TCU6 1659 aa7.84□□□□□ -1.15
HMGB1P23-201ENST00000518743 CSB-PGBD3P0DP91 1061 aa7.84□□□□□ -1.15
HMGB1P23-201ENST00000518743 PBX2P40425 430 aa7.84□□□□□ -1.15
HMGB1P23-201ENST00000518743 IFFO2Q5TF58 517 aa7.84□□□□□ -1.15
HMGB1P23-201ENST00000518743 HDGFL1Q5TGJ6 251 aa7.84□□□□□ -1.15
HMGB1P23-201ENST00000518743 CABLES1Q8TDN4 633 aa7.84□□□□□ -1.15
HMGB1P23-201ENST00000518743 GJD4Q96KN9 370 aaPredicted RBP7.84□□□□□ -1.15
HMGB1P23-201ENST00000518743 KCNK17Q96T54 332 aa7.84□□□□□ -1.15
HMGB1P23-201ENST00000518743 RABGEF1Q9UJ41 708 aa7.84□□□□□ -1.15
HMGB1P23-201ENST00000518743 SETD1AO15047 1707 aaKnown RBP7.83□□□□□ -1.16
HMGB1P23-201ENST00000518743 RUSC2Q8N2Y8 1516 aa7.83□□□□□ -1.16
HMGB1P23-201ENST00000518743 KCNA1Q09470 495 aa7.83□□□□□ -1.16
HMGB1P23-201ENST00000518743 TMCO4Q5TGY1 634 aa7.83□□□□□ -1.16
HMGB1P23-201ENST00000518743 DMRTA1Q5VZB9 504 aa7.83□□□□□ -1.16
HMGB1P23-201ENST00000518743 SLC4A5Q9BY07 1137 aa7.83□□□□□ -1.16
HMGB1P23-201ENST00000518743 KIAA1468Q9P260 1216 aa7.83□□□□□ -1.16
HMGB1P23-201ENST00000518743 POM121CA8CG34 1229 aa7.82□□□□□ -1.16
HMGB1P23-201ENST00000518743 ARHGAP33O14559 1287 aa7.82□□□□□ -1.16
HMGB1P23-201ENST00000518743 BRD1O95696 1058 aa7.82□□□□□ -1.16
HMGB1P23-201ENST00000518743 PTPRGP23470 1445 aa7.82□□□□□ -1.16
HMGB1P23-201ENST00000518743 ZBED2Q9BTP6 218 aa7.81□□□□□ -1.16
HMGB1P23-201ENST00000518743 CUX1P39880 1505 aa7.81□□□□□ -1.16
HMGB1P23-201ENST00000518743 CD109Q6YHK3 1445 aa7.8□□□□□ -1.16
HMGB1P23-201ENST00000518743 ABCA10Q8WWZ4 1543 aa7.8□□□□□ -1.16
HMGB1P23-201ENST00000518743 C6orf229H3BNL8 230 aa7.8□□□□□ -1.16
HMGB1P23-201ENST00000518743 SMAPO00193 183 aa7.8□□□□□ -1.16
HMGB1P23-201ENST00000518743 CTDSPL2Q05D32 466 aa7.8□□□□□ -1.16
HMGB1P23-201ENST00000518743 IRF5Q13568 498 aa7.8□□□□□ -1.16
HMGB1P23-201ENST00000518743 FAM98CQ17RN3 349 aaKnown RBP7.8□□□□□ -1.16
HMGB1P23-201ENST00000518743 PROX2Q3B8N5 592 aa7.8□□□□□ -1.16
HMGB1P23-201ENST00000518743 KMT5BQ4FZB7 885 aa7.8□□□□□ -1.16
HMGB1P23-201ENST00000518743 SWT1Q5T5J6 900 aaKnown RBP7.8□□□□□ -1.16
HMGB1P23-201ENST00000518743 LAPTM4BQ86VI4 370 aa7.8□□□□□ -1.16
HMGB1P23-201ENST00000518743 TSC1Q92574 1164 aa7.8□□□□□ -1.16
HMGB1P23-201ENST00000518743 PRR14Q9BWN1 585 aa7.8□□□□□ -1.16
HMGB1P23-201ENST00000518743 ATP6V1AP38606 617 aa7.79□□□□□ -1.16
HMGB1P23-201ENST00000518743 Q3C1V9 767 aa7.79□□□□□ -1.16
HMGB1P23-201ENST00000518743 B4GALNT3Q6L9W6 998 aa7.79□□□□□ -1.16
HMGB1P23-201ENST00000518743 ZNF592Q92610 1267 aa7.79□□□□□ -1.16
HMGB1P23-201ENST00000518743 PPP1R12CQ9BZL4 782 aa7.79□□□□□ -1.16
HMGB1P23-201ENST00000518743 C3orf80F5H4A9 247 aa7.78□□□□□ -1.16
HMGB1P23-201ENST00000518743 EIF4G2P78344 907 aaKnown RBP eCLIP7.78□□□□□ -1.16
HMGB1P23-201ENST00000518743 SEMA3FQ13275 785 aa7.78□□□□□ -1.16
HMGB1P23-201ENST00000518743 DESI1Q6ICB0 168 aa7.78□□□□□ -1.16
HMGB1P23-201ENST00000518743 TRIM34Q9BYJ4 488 aa7.78□□□□□ -1.16
HMGB1P23-201ENST00000518743 NBPF3Q9H094 633 aa7.78□□□□□ -1.16
HMGB1P23-201ENST00000518743 PCDHGC3Q9UN70 934 aa7.78□□□□□ -1.16
HMGB1P23-201ENST00000518743 FER1L4A9Z1Z3 1794 aa7.78□□□□□ -1.16
HMGB1P23-201ENST00000518743 SLC10A3P09131 477 aa7.77□□□□□ -1.17
HMGB1P23-201ENST00000518743 MLECQ14165 292 aa7.77□□□□□ -1.17
HMGB1P23-201ENST00000518743 ALG2Q9H553 416 aa7.77□□□□□ -1.17
HMGB1P23-201ENST00000518743 MYT1LQ9UL68 1186 aa7.77□□□□□ -1.17
HMGB1P23-201ENST00000518743 MAGI3Q5TCQ9 1506 aa7.77□□□□□ -1.17
HMGB1P23-201ENST00000518743 POGZQ7Z3K3 1410 aa7.77□□□□□ -1.17
HMGB1P23-201ENST00000518743 ADGRD1Q6QNK2 874 aa7.76□□□□□ -1.17
HMGB1P23-201ENST00000518743 RETREG3Q86VR2 466 aa7.76□□□□□ -1.17
HMGB1P23-201ENST00000518743 GZF1Q9H116 711 aaPredicted RBP7.76□□□□□ -1.17
HMGB1P23-201ENST00000518743 UHRF1BP1Q6BDS2 1440 aa7.76□□□□□ -1.17
HMGB1P23-201ENST00000518743 ZCCHC11Q5TAX3 1644 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms