RNA–Protein interactions for RNA: ENST00000515483.5

TNPO1-210, Transcript of transportin 1, humanhuman

TSL 4

Gene TNPO1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-210ENST00000515483 SAFB2Q14151 953 aaKnown RBP eCLIP22.27■■□□□ 1.16
TNPO1-210ENST00000515483 ANKARQ7Z5J8 1434 aa22.27■■□□□ 1.16
TNPO1-210ENST00000515483 C14orf93Q9H972 538 aaKnown RBP22.27■■□□□ 1.16
TNPO1-210ENST00000515483 PRDM11Q9NQV5 511 aa22.27■■□□□ 1.16
TNPO1-210ENST00000515483 IFT172Q9UG01 1749 aa22.27■■□□□ 1.16
TNPO1-210ENST00000515483 RGPD8O14715 1765 aaPredicted RBP22.27■■□□□ 1.16
TNPO1-210ENST00000515483 PPARGC1BQ86YN6 1023 aaKnown RBP22.26■■□□□ 1.15
TNPO1-210ENST00000515483 PRAM1Q96QH2 718 aa22.26■■□□□ 1.15
TNPO1-210ENST00000515483 SPON1Q9HCB6 807 aa22.26■■□□□ 1.15
TNPO1-210ENST00000515483 THSD7AQ9UPZ6 1657 aa22.26■■□□□ 1.15
TNPO1-210ENST00000515483 SPATA31A1Q5TZJ5 1347 aa22.25■■□□□ 1.15
TNPO1-210ENST00000515483 POGKQ9P215 609 aa22.24■■□□□ 1.15
TNPO1-210ENST00000515483 NINLQ9Y2I6 1382 aa22.23■■□□□ 1.15
TNPO1-210ENST00000515483 ACIN1Q9UKV3 1341 aaKnown RBP22.22■■□□□ 1.15
TNPO1-210ENST00000515483 KCNQ2O43526 872 aa22.21■■□□□ 1.15
TNPO1-210ENST00000515483 PDE3BQ13370 1112 aa22.21■■□□□ 1.15
TNPO1-210ENST00000515483 PAK3O75914 559 aaPredicted RBP22.19■■□□□ 1.14
TNPO1-210ENST00000515483 CFAP70Q5T0N1 1121 aa22.19■■□□□ 1.14
TNPO1-210ENST00000515483 STRN4Q9NRL3 753 aa22.19■■□□□ 1.14
TNPO1-210ENST00000515483 EIF3AQ14152 1382 aaKnown RBP22.18■■□□□ 1.14
TNPO1-210ENST00000515483 TRPM3Q9HCF6 1732 aaPredicted RBP22.17■■□□□ 1.14
TNPO1-210ENST00000515483 NGDNQ8NEJ9 315 aaKnown RBP22.17■■□□□ 1.14
TNPO1-210ENST00000515483 ALS2Q96Q42 1657 aa22.17■■□□□ 1.14
TNPO1-210ENST00000515483 BARGINQ6ZT62 677 aa22.16■■□□□ 1.14
TNPO1-210ENST00000515483 KIAA0232Q92628 1395 aa22.15■■□□□ 1.14
TNPO1-210ENST00000515483 USP35Q9P2H5 1018 aa22.15■■□□□ 1.14
TNPO1-210ENST00000515483 EVA1CP58658 441 aa22.14■■□□□ 1.13
TNPO1-210ENST00000515483 CHRNA2Q15822 529 aa22.14■■□□□ 1.13
TNPO1-210ENST00000515483 HIRIP3Q9BW71 556 aaPredicted RBP22.13■■□□□ 1.13
TNPO1-210ENST00000515483 RREB1Q92766 1687 aa22.13■■□□□ 1.13
TNPO1-210ENST00000515483 DLC1Q96QB1 1528 aa22.12■■□□□ 1.13
TNPO1-210ENST00000515483 C11orf95C9JLR9 678 aaPredicted RBP22.12■■□□□ 1.13
TNPO1-210ENST00000515483 PRR36Q9H6K5 1346 aa22.11■■□□□ 1.13
TNPO1-210ENST00000515483 MPHOSPH9Q99550 1183 aa22.11■■□□□ 1.13
TNPO1-210ENST00000515483 ZC3H6P61129 1189 aaKnown RBP22.1■■□□□ 1.13
TNPO1-210ENST00000515483 NUP188Q5SRE5 1749 aa22.1■■□□□ 1.13
TNPO1-210ENST00000515483 WASLO00401 505 aaPredicted RBP22.09■■□□□ 1.13
TNPO1-210ENST00000515483 TCP11L2Q8N4U5 519 aa22.09■■□□□ 1.13
TNPO1-210ENST00000515483 MINK1Q8N4C8 1332 aaPredicted RBP22.08■■□□□ 1.13
TNPO1-210ENST00000515483 ZNF784Q8NCA9 323 aaPredicted RBP22.08■■□□□ 1.13
TNPO1-210ENST00000515483 TULP4Q9NRJ4 1543 aa22.07■■□□□ 1.12
TNPO1-210ENST00000515483 TRAK1Q9UPV9 953 aa22.07■■□□□ 1.12
TNPO1-210ENST00000515483 SSH2Q76I76 1423 aa22.06■■□□□ 1.12
TNPO1-210ENST00000515483 CRYBG1Q9Y4K1 1723 aa22.06■■□□□ 1.12
TNPO1-210ENST00000515483 THRAP3Q9Y2W1 955 aaKnown RBP22.06■■□□□ 1.12
TNPO1-210ENST00000515483 LARP1Q6PKG0 1096 aaKnown RBP22.04■■□□□ 1.12
TNPO1-210ENST00000515483 SENP3-EIF4A1A0A087X0R7 540 aa22.03■■□□□ 1.12
TNPO1-210ENST00000515483 PLSCR1O15162 318 aa22.03■■□□□ 1.12
TNPO1-210ENST00000515483 ATP7BP35670 1465 aa22.02■■□□□ 1.12
TNPO1-210ENST00000515483 NUTM2GQ5VZR2 741 aa22.01■■□□□ 1.11
TNPO1-210ENST00000515483 NUDT16Q96DE0 195 aaKnown RBP21.99■■□□□ 1.11
TNPO1-210ENST00000515483 CAMTA1Q9Y6Y1 1673 aa21.98■■□□□ 1.11
TNPO1-210ENST00000515483 C1QTNF8P60827 252 aa21.97■■□□□ 1.11
TNPO1-210ENST00000515483 ANO8Q9HCE9 1232 aaPredicted RBP21.97■■□□□ 1.11
TNPO1-210ENST00000515483 CPDO75976 1380 aa21.97■■□□□ 1.11
TNPO1-210ENST00000515483 OVOS2A0A0G2JMS6 1433 aa21.97■■□□□ 1.11
TNPO1-210ENST00000515483 OVOS2A0A0J9YW53 1432 aa21.97■■□□□ 1.11
TNPO1-210ENST00000515483 OVOS2Q6IE36 1432 aa21.97■■□□□ 1.11
TNPO1-210ENST00000515483 ADGRB1O14514 1584 aa21.96■■□□□ 1.11
TNPO1-210ENST00000515483 PHRF1Q9P1Y6 1649 aaKnown RBP21.96■■□□□ 1.11
TNPO1-210ENST00000515483 ZBTB7AO95365 584 aa21.96■■□□□ 1.11
TNPO1-210ENST00000515483 IFFO2Q5TF58 517 aa21.96■■□□□ 1.11
TNPO1-210ENST00000515483 BCL11BQ9C0K0 894 aaPredicted RBP21.96■■□□□ 1.11
TNPO1-210ENST00000515483 ABTB2Q8N961 1025 aa21.95■■□□□ 1.1
TNPO1-210ENST00000515483 PTGER2P43116 358 aa21.94■■□□□ 1.1
TNPO1-210ENST00000515483 NRKQ7Z2Y5 1582 aa21.93■■□□□ 1.1
TNPO1-210ENST00000515483 SYT17Q9BSW7 474 aa21.92■■□□□ 1.1
TNPO1-210ENST00000515483 PDGFDQ9GZP0 370 aaPredicted RBP21.92■■□□□ 1.1
TNPO1-210ENST00000515483 ATF5Q9Y2D1 282 aaPredicted RBP21.92■■□□□ 1.1
TNPO1-210ENST00000515483 UTRNP46939 3433 aa21.92■■□□□ 1.1
TNPO1-210ENST00000515483 POLR3AO14802 1390 aaPredicted RBP21.91■■□□□ 1.1
TNPO1-210ENST00000515483 ACEP12821 1306 aa21.91■■□□□ 1.1
TNPO1-210ENST00000515483 DDB1Q16531 1140 aa21.91■■□□□ 1.1
TNPO1-210ENST00000515483 RGPD3A6NKT7 1758 aaPredicted RBP21.9■■□□□ 1.1
TNPO1-210ENST00000515483 RGPD4Q7Z3J3 1758 aa21.9■■□□□ 1.1
TNPO1-210ENST00000515483 USP19O94966 1318 aa21.9■■□□□ 1.1
TNPO1-210ENST00000515483 PARP4Q9UKK3 1724 aaKnown RBP21.9■■□□□ 1.1
TNPO1-210ENST00000515483 NLRP13Q86W25 1043 aa21.9■■□□□ 1.1
TNPO1-210ENST00000515483 FHDC1Q9C0D6 1143 aaPredicted RBP21.9■■□□□ 1.1
TNPO1-210ENST00000515483 CCDC61Q9Y6R9 512 aa21.9■■□□□ 1.1
TNPO1-210ENST00000515483 CRB1P82279 1406 aa21.89■■□□□ 1.1
TNPO1-210ENST00000515483 CASZ1Q86V15 1759 aa21.89■■□□□ 1.1
TNPO1-210ENST00000515483 ITSN1Q15811 1721 aa21.89■■□□□ 1.1
TNPO1-210ENST00000515483 GCP02774 474 aa21.89■■□□□ 1.09
TNPO1-210ENST00000515483 CDK19Q9BWU1 502 aa21.89■■□□□ 1.09
TNPO1-210ENST00000515483 STK32BQ9NY57 414 aa21.89■■□□□ 1.09
TNPO1-210ENST00000515483 PROM2Q8N271 834 aa21.88■■□□□ 1.09
TNPO1-210ENST00000515483 COL5A2P05997 1499 aaPredicted RBP21.88■■□□□ 1.09
TNPO1-210ENST00000515483 LMO7Q8WWI1 1683 aa21.88■■□□□ 1.09
TNPO1-210ENST00000515483 PLEKHG3A1L390 1219 aa21.87■■□□□ 1.09
TNPO1-210ENST00000515483 STAC3Q96MF2 364 aa21.87■■□□□ 1.09
TNPO1-210ENST00000515483 KDM2AQ9Y2K7 1162 aa21.87■■□□□ 1.09
TNPO1-210ENST00000515483 MTFR1LQ9H019 292 aa21.86■■□□□ 1.09
TNPO1-210ENST00000515483 SLC15A2Q16348 729 aa21.85■■□□□ 1.09
TNPO1-210ENST00000515483 PEAK1Q9H792 1746 aa21.85■■□□□ 1.09
TNPO1-210ENST00000515483 MYOM1P52179 1685 aa21.85■■□□□ 1.09
TNPO1-210ENST00000515483 PTF1AQ7RTS3 328 aa21.84■■□□□ 1.09
TNPO1-210ENST00000515483 DCAF11Q8TEB1 546 aa21.84■■□□□ 1.09
TNPO1-210ENST00000515483 TXNRD1Q16881 649 aa21.83■■□□□ 1.09
TNPO1-210ENST00000515483 TOM1L2Q6ZVM7 507 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms