RNA–Protein interactions for RNA: ENST00000513756.5

PTPN20-229, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-229ENST00000513756 SAFB2Q14151 953 aaKnown RBP eCLIP18.03■□□□□ 0.48
PTPN20-229ENST00000513756 PRAM1Q96QH2 718 aa18.03■□□□□ 0.48
PTPN20-229ENST00000513756 TRIM37O94972 964 aa18.02■□□□□ 0.48
PTPN20-229ENST00000513756 APBA3O96018 575 aa18.02■□□□□ 0.48
PTPN20-229ENST00000513756 POGKQ9P215 609 aa18.02■□□□□ 0.48
PTPN20-229ENST00000513756 THSD7AQ9UPZ6 1657 aa18.02■□□□□ 0.47
PTPN20-229ENST00000513756 NBPF8Q3BBV2 869 aa18.01■□□□□ 0.47
PTPN20-229ENST00000513756 NBPF14Q5TI25 921 aa18.01■□□□□ 0.47
PTPN20-229ENST00000513756 PRDM11Q9NQV5 511 aa18.01■□□□□ 0.47
PTPN20-229ENST00000513756 TRPM3Q9HCF6 1732 aaPredicted RBP18■□□□□ 0.47
PTPN20-229ENST00000513756 EIF3AQ14152 1382 aaKnown RBP17.99■□□□□ 0.47
PTPN20-229ENST00000513756 ALS2Q96Q42 1657 aa17.99■□□□□ 0.47
PTPN20-229ENST00000513756 SPATA31A1Q5TZJ5 1347 aa17.98■□□□□ 0.47
PTPN20-229ENST00000513756 CFAP70Q5T0N1 1121 aa17.98■□□□□ 0.47
PTPN20-229ENST00000513756 PPP1R1BQ9UD71 204 aaPredicted RBP17.98■□□□□ 0.47
PTPN20-229ENST00000513756 ACIN1Q9UKV3 1341 aaKnown RBP17.98■□□□□ 0.47
PTPN20-229ENST00000513756 PAK3O75914 559 aaPredicted RBP17.96■□□□□ 0.47
PTPN20-229ENST00000513756 DLC1Q96QB1 1528 aa17.96■□□□□ 0.47
PTPN20-229ENST00000513756 PDE3BQ13370 1112 aa17.95■□□□□ 0.46
PTPN20-229ENST00000513756 NGDNQ8NEJ9 315 aaKnown RBP17.95■□□□□ 0.46
PTPN20-229ENST00000513756 MPHOSPH9Q99550 1183 aa17.95■□□□□ 0.46
PTPN20-229ENST00000513756 SPON1Q9HCB6 807 aa17.95■□□□□ 0.46
PTPN20-229ENST00000513756 STRN4Q9NRL3 753 aa17.94■□□□□ 0.46
PTPN20-229ENST00000513756 RREB1Q92766 1687 aa17.93■□□□□ 0.46
PTPN20-229ENST00000513756 NINLQ9Y2I6 1382 aa17.92■□□□□ 0.46
PTPN20-229ENST00000513756 KCNQ2O43526 872 aa17.92■□□□□ 0.46
PTPN20-229ENST00000513756 HIRIP3Q9BW71 556 aaPredicted RBP17.92■□□□□ 0.46
PTPN20-229ENST00000513756 KIAA0232Q92628 1395 aa17.91■□□□□ 0.46
PTPN20-229ENST00000513756 EVA1CP58658 441 aa17.91■□□□□ 0.46
PTPN20-229ENST00000513756 BARGINQ6ZT62 677 aa17.91■□□□□ 0.46
PTPN20-229ENST00000513756 CRYBG1Q9Y4K1 1723 aa17.91■□□□□ 0.46
PTPN20-229ENST00000513756 TULP4Q9NRJ4 1543 aa17.91■□□□□ 0.46
PTPN20-229ENST00000513756 NUP188Q5SRE5 1749 aa17.9■□□□□ 0.46
PTPN20-229ENST00000513756 WASLO00401 505 aaPredicted RBP17.9■□□□□ 0.46
PTPN20-229ENST00000513756 CHRNA2Q15822 529 aa17.9■□□□□ 0.46
PTPN20-229ENST00000513756 USP35Q9P2H5 1018 aa17.9■□□□□ 0.46
PTPN20-229ENST00000513756 MINK1Q8N4C8 1332 aaPredicted RBP17.9■□□□□ 0.46
PTPN20-229ENST00000513756 PRR36Q9H6K5 1346 aa17.9■□□□□ 0.46
PTPN20-229ENST00000513756 C11orf95C9JLR9 678 aaPredicted RBP17.89■□□□□ 0.45
PTPN20-229ENST00000513756 TRAK1Q9UPV9 953 aa17.89■□□□□ 0.45
PTPN20-229ENST00000513756 ZC3H6P61129 1189 aaKnown RBP17.87■□□□□ 0.45
PTPN20-229ENST00000513756 TCP11L2Q8N4U5 519 aa17.86■□□□□ 0.45
PTPN20-229ENST00000513756 ATP7BP35670 1465 aa17.85■□□□□ 0.45
PTPN20-229ENST00000513756 SSH2Q76I76 1423 aa17.85■□□□□ 0.45
PTPN20-229ENST00000513756 THRAP3Q9Y2W1 955 aaKnown RBP17.85■□□□□ 0.45
PTPN20-229ENST00000513756 PHRF1Q9P1Y6 1649 aaKnown RBP17.83■□□□□ 0.45
PTPN20-229ENST00000513756 ADGRB1O14514 1584 aa17.83■□□□□ 0.44
PTPN20-229ENST00000513756 LARP1Q6PKG0 1096 aaKnown RBP17.82■□□□□ 0.44
PTPN20-229ENST00000513756 ITSN1Q15811 1721 aa17.81■□□□□ 0.44
PTPN20-229ENST00000513756 NUTM2GQ5VZR2 741 aa17.81■□□□□ 0.44
PTPN20-229ENST00000513756 NUDT16Q96DE0 195 aaKnown RBP17.81■□□□□ 0.44
PTPN20-229ENST00000513756 PLSCR1O15162 318 aa17.79■□□□□ 0.44
PTPN20-229ENST00000513756 CPDO75976 1380 aa17.79■□□□□ 0.44
PTPN20-229ENST00000513756 CAMTA1Q9Y6Y1 1673 aa17.77■□□□□ 0.44
PTPN20-229ENST00000513756 ABTB2Q8N961 1025 aa17.77■□□□□ 0.44
PTPN20-229ENST00000513756 ZNF784Q8NCA9 323 aaPredicted RBP17.77■□□□□ 0.44
PTPN20-229ENST00000513756 OVOS2A0A0G2JMS6 1433 aa17.77■□□□□ 0.44
PTPN20-229ENST00000513756 OVOS2A0A0J9YW53 1432 aa17.77■□□□□ 0.44
PTPN20-229ENST00000513756 OVOS2Q6IE36 1432 aa17.77■□□□□ 0.44
PTPN20-229ENST00000513756 RGPD3A6NKT7 1758 aaPredicted RBP17.76■□□□□ 0.43
PTPN20-229ENST00000513756 RGPD4Q7Z3J3 1758 aa17.76■□□□□ 0.43
PTPN20-229ENST00000513756 PARP4Q9UKK3 1724 aaKnown RBP17.76■□□□□ 0.43
PTPN20-229ENST00000513756 ACEP12821 1306 aa17.75■□□□□ 0.43
PTPN20-229ENST00000513756 STAC3Q96MF2 364 aa17.75■□□□□ 0.43
PTPN20-229ENST00000513756 POLR3AO14802 1390 aaPredicted RBP17.75■□□□□ 0.43
PTPN20-229ENST00000513756 CDK19Q9BWU1 502 aa17.74■□□□□ 0.43
PTPN20-229ENST00000513756 BCL11BQ9C0K0 894 aaPredicted RBP17.74■□□□□ 0.43
PTPN20-229ENST00000513756 KDM2AQ9Y2K7 1162 aa17.74■□□□□ 0.43
PTPN20-229ENST00000513756 CCDC61Q9Y6R9 512 aa17.74■□□□□ 0.43
PTPN20-229ENST00000513756 NRKQ7Z2Y5 1582 aa17.74■□□□□ 0.43
PTPN20-229ENST00000513756 LMO7Q8WWI1 1683 aa17.74■□□□□ 0.43
PTPN20-229ENST00000513756 NLRP13Q86W25 1043 aa17.73■□□□□ 0.43
PTPN20-229ENST00000513756 USP19O94966 1318 aa17.72■□□□□ 0.43
PTPN20-229ENST00000513756 CASZ1Q86V15 1759 aa17.72■□□□□ 0.43
PTPN20-229ENST00000513756 PLEKHG3A1L390 1219 aa17.72■□□□□ 0.43
PTPN20-229ENST00000513756 ZBTB7AO95365 584 aa17.72■□□□□ 0.43
PTPN20-229ENST00000513756 DDB1Q16531 1140 aa17.72■□□□□ 0.43
PTPN20-229ENST00000513756 DCAF11Q8TEB1 546 aa17.72■□□□□ 0.43
PTPN20-229ENST00000513756 ANO8Q9HCE9 1232 aaPredicted RBP17.72■□□□□ 0.43
PTPN20-229ENST00000513756 UTRNP46939 3433 aa17.72■□□□□ 0.43
PTPN20-229ENST00000513756 CRB1P82279 1406 aa17.72■□□□□ 0.43
PTPN20-229ENST00000513756 COL5A2P05997 1499 aaPredicted RBP17.71■□□□□ 0.43
PTPN20-229ENST00000513756 SENP3-EIF4A1A0A087X0R7 540 aa17.71■□□□□ 0.43
PTPN20-229ENST00000513756 GCP02774 474 aa17.71■□□□□ 0.43
PTPN20-229ENST00000513756 PEAK1Q9H792 1746 aa17.69■□□□□ 0.42
PTPN20-229ENST00000513756 PTGER2P43116 358 aa17.69■□□□□ 0.42
PTPN20-229ENST00000513756 STK32BQ9NY57 414 aa17.69■□□□□ 0.42
PTPN20-229ENST00000513756 SBF2Q86WG5 1849 aa17.69■□□□□ 0.42
PTPN20-229ENST00000513756 ARHGEF28Q8N1W1 1705 aaKnown RBP17.69■□□□□ 0.42
PTPN20-229ENST00000513756 C1QTNF8P60827 252 aa17.68■□□□□ 0.42
PTPN20-229ENST00000513756 ATF5Q9Y2D1 282 aaPredicted RBP17.68■□□□□ 0.42
PTPN20-229ENST00000513756 TOPAZ1Q8N9V7 1692 aa17.67■□□□□ 0.42
PTPN20-229ENST00000513756 SYT17Q9BSW7 474 aa17.67■□□□□ 0.42
PTPN20-229ENST00000513756 PDGFDQ9GZP0 370 aaPredicted RBP17.67■□□□□ 0.42
PTPN20-229ENST00000513756 MYOM1P52179 1685 aa17.67■□□□□ 0.42
PTPN20-229ENST00000513756 ZBTB7CA1YPR0 619 aa17.66■□□□□ 0.42
PTPN20-229ENST00000513756 TOM1L2Q6ZVM7 507 aa17.66■□□□□ 0.42
PTPN20-229ENST00000513756 PROM2Q8N271 834 aa17.66■□□□□ 0.42
PTPN20-229ENST00000513756 CDCA7Q9BWT1 371 aaPredicted RBP17.66■□□□□ 0.42
PTPN20-229ENST00000513756 FHDC1Q9C0D6 1143 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms