RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 PIK3C2GO75747 1445 aa18.23■□□□□ 0.51
COPS4-210ENST00000511708 KCNQ2O43526 872 aa18.23■□□□□ 0.51
COPS4-210ENST00000511708 IFFO2Q5TF58 517 aa18.23■□□□□ 0.51
COPS4-210ENST00000511708 PPP1R1BQ9UD71 204 aaPredicted RBP18.23■□□□□ 0.51
COPS4-210ENST00000511708 UTRNP46939 3433 aa18.23■□□□□ 0.51
COPS4-210ENST00000511708 SPATA31A1Q5TZJ5 1347 aa18.23■□□□□ 0.51
COPS4-210ENST00000511708 NBPF8Q3BBV2 869 aa18.22■□□□□ 0.51
COPS4-210ENST00000511708 NBPF14Q5TI25 921 aa18.22■□□□□ 0.51
COPS4-210ENST00000511708 SPATA31E1Q6ZUB1 1445 aa18.22■□□□□ 0.51
COPS4-210ENST00000511708 ANKARQ7Z5J8 1434 aa18.22■□□□□ 0.51
COPS4-210ENST00000511708 ANKRD30BQ9BXX2 1392 aa18.21■□□□□ 0.51
COPS4-210ENST00000511708 ZNF784Q8NCA9 323 aaPredicted RBP18.21■□□□□ 0.51
COPS4-210ENST00000511708 CHD4Q14839 1912 aa18.19■□□□□ 0.5
COPS4-210ENST00000511708 PMFBP1Q8TBY8 1022 aa18.19■□□□□ 0.5
COPS4-210ENST00000511708 CASZ1Q86V15 1759 aa18.19■□□□□ 0.5
COPS4-210ENST00000511708 SENP3-EIF4A1A0A087X0R7 540 aa18.17■□□□□ 0.5
COPS4-210ENST00000511708 RGPD3A6NKT7 1758 aaPredicted RBP18.17■□□□□ 0.5
COPS4-210ENST00000511708 RGPD4Q7Z3J3 1758 aa18.17■□□□□ 0.5
COPS4-210ENST00000511708 PRDM11Q9NQV5 511 aa18.16■□□□□ 0.5
COPS4-210ENST00000511708 NRKQ7Z2Y5 1582 aa18.16■□□□□ 0.5
COPS4-210ENST00000511708 PHRF1Q9P1Y6 1649 aaKnown RBP18.14■□□□□ 0.49
COPS4-210ENST00000511708 RGL3Q3MIN7 710 aa18.14■□□□□ 0.49
COPS4-210ENST00000511708 SLC4A1APQ9BWU0 796 aaKnown RBP18.14■□□□□ 0.49
COPS4-210ENST00000511708 ACIN1Q9UKV3 1341 aaKnown RBP18.14■□□□□ 0.49
COPS4-210ENST00000511708 GPRASP1Q5JY77 1395 aa18.14■□□□□ 0.49
COPS4-210ENST00000511708 BARGINQ6ZT62 677 aa18.13■□□□□ 0.49
COPS4-210ENST00000511708 C14orf93Q9H972 538 aaKnown RBP18.13■□□□□ 0.49
COPS4-210ENST00000511708 DLC1Q96QB1 1528 aa18.13■□□□□ 0.49
COPS4-210ENST00000511708 MYOM1P52179 1685 aa18.12■□□□□ 0.49
COPS4-210ENST00000511708 C1QTNF8P60827 252 aa18.12■□□□□ 0.49
COPS4-210ENST00000511708 PRAM1Q96QH2 718 aa18.12■□□□□ 0.49
COPS4-210ENST00000511708 CEP350Q5VT06 3117 aa18.12■□□□□ 0.49
COPS4-210ENST00000511708 KIAA0232Q92628 1395 aa18.12■□□□□ 0.49
COPS4-210ENST00000511708 PDE3BQ13370 1112 aa18.11■□□□□ 0.49
COPS4-210ENST00000511708 SBF2Q86WG5 1849 aa18.11■□□□□ 0.49
COPS4-210ENST00000511708 PARP4Q9UKK3 1724 aaKnown RBP18.1■□□□□ 0.49
COPS4-210ENST00000511708 DHX57Q6P158 1386 aaKnown RBP18.1■□□□□ 0.49
COPS4-210ENST00000511708 PRR36Q9H6K5 1346 aa18.1■□□□□ 0.49
COPS4-210ENST00000511708 SAFB2Q14151 953 aaKnown RBP eCLIP18.1■□□□□ 0.49
COPS4-210ENST00000511708 PEAK1Q9H792 1746 aa18.09■□□□□ 0.49
COPS4-210ENST00000511708 SSH2Q76I76 1423 aa18.09■□□□□ 0.49
COPS4-210ENST00000511708 CHRNA2Q15822 529 aa18.09■□□□□ 0.49
COPS4-210ENST00000511708 STRN4Q9NRL3 753 aa18.09■□□□□ 0.49
COPS4-210ENST00000511708 TULP4Q9NRJ4 1543 aa18.08■□□□□ 0.49
COPS4-210ENST00000511708 ANO8Q9HCE9 1232 aaPredicted RBP18.07■□□□□ 0.48
COPS4-210ENST00000511708 USP35Q9P2H5 1018 aa18.07■□□□□ 0.48
COPS4-210ENST00000511708 LMO7Q8WWI1 1683 aa18.06■□□□□ 0.48
COPS4-210ENST00000511708 PTGER2P43116 358 aa18.06■□□□□ 0.48
COPS4-210ENST00000511708 CFAP70Q5T0N1 1121 aa18.06■□□□□ 0.48
COPS4-210ENST00000511708 EIF3AQ14152 1382 aaKnown RBP18.05■□□□□ 0.48
COPS4-210ENST00000511708 PLSCR1O15162 318 aa18.05■□□□□ 0.48
COPS4-210ENST00000511708 PDGFDQ9GZP0 370 aaPredicted RBP18.05■□□□□ 0.48
COPS4-210ENST00000511708 TCP11L2Q8N4U5 519 aa18.04■□□□□ 0.48
COPS4-210ENST00000511708 C11orf95C9JLR9 678 aaPredicted RBP18.03■□□□□ 0.48
COPS4-210ENST00000511708 PAK3O75914 559 aaPredicted RBP18.03■□□□□ 0.48
COPS4-210ENST00000511708 POGKQ9P215 609 aa18.03■□□□□ 0.48
COPS4-210ENST00000511708 ITSN1Q15811 1721 aa18.03■□□□□ 0.48
COPS4-210ENST00000511708 ATP7BP35670 1465 aa18.02■□□□□ 0.48
COPS4-210ENST00000511708 ZC3H6P61129 1189 aaKnown RBP18.02■□□□□ 0.48
COPS4-210ENST00000511708 LARP1Q6PKG0 1096 aaKnown RBP18.02■□□□□ 0.48
COPS4-210ENST00000511708 ADGRB1O14514 1584 aa18.01■□□□□ 0.47
COPS4-210ENST00000511708 OVOS2A0A0G2JMS6 1433 aa18.01■□□□□ 0.47
COPS4-210ENST00000511708 OVOS2A0A0J9YW53 1432 aa18.01■□□□□ 0.47
COPS4-210ENST00000511708 OVOS2Q6IE36 1432 aa18.01■□□□□ 0.47
COPS4-210ENST00000511708 NGDNQ8NEJ9 315 aaKnown RBP18.01■□□□□ 0.47
COPS4-210ENST00000511708 SYT17Q9BSW7 474 aa18.01■□□□□ 0.47
COPS4-210ENST00000511708 HIRIP3Q9BW71 556 aaPredicted RBP18.01■□□□□ 0.47
COPS4-210ENST00000511708 THRAP3Q9Y2W1 955 aaKnown RBP18.01■□□□□ 0.47
COPS4-210ENST00000511708 ZBTB7AO95365 584 aa18■□□□□ 0.47
COPS4-210ENST00000511708 EVA1CP58658 441 aa18■□□□□ 0.47
COPS4-210ENST00000511708 FHDC1Q9C0D6 1143 aaPredicted RBP18■□□□□ 0.47
COPS4-210ENST00000511708 LRRC37A3O60309 1634 aa17.98■□□□□ 0.47
COPS4-210ENST00000511708 WASLO00401 505 aaPredicted RBP17.98■□□□□ 0.47
COPS4-210ENST00000511708 PROM2Q8N271 834 aa17.98■□□□□ 0.47
COPS4-210ENST00000511708 CPDO75976 1380 aa17.98■□□□□ 0.47
COPS4-210ENST00000511708 MINK1Q8N4C8 1332 aaPredicted RBP17.98■□□□□ 0.47
COPS4-210ENST00000511708 SGIP1Q9BQI5 828 aa17.97■□□□□ 0.47
COPS4-210ENST00000511708 ATF5Q9Y2D1 282 aaPredicted RBP17.97■□□□□ 0.47
COPS4-210ENST00000511708 PTF1AQ7RTS3 328 aa17.95■□□□□ 0.46
COPS4-210ENST00000511708 PPARGC1BQ86YN6 1023 aaKnown RBP17.95■□□□□ 0.46
COPS4-210ENST00000511708 COL5A2P05997 1499 aaPredicted RBP17.95■□□□□ 0.46
COPS4-210ENST00000511708 NUTM2GQ5VZR2 741 aa17.94■□□□□ 0.46
COPS4-210ENST00000511708 BCL11BQ9C0K0 894 aaPredicted RBP17.94■□□□□ 0.46
COPS4-210ENST00000511708 WNK3Q9BYP7 1800 aa17.93■□□□□ 0.46
COPS4-210ENST00000511708 MAP3K5Q99683 1374 aa17.93■□□□□ 0.46
COPS4-210ENST00000511708 TRAK1Q9UPV9 953 aa17.93■□□□□ 0.46
COPS4-210ENST00000511708 USP19O94966 1318 aa17.93■□□□□ 0.46
COPS4-210ENST00000511708 TOPAZ1Q8N9V7 1692 aa17.93■□□□□ 0.46
COPS4-210ENST00000511708 AKAP12Q02952 1782 aa17.92■□□□□ 0.46
COPS4-210ENST00000511708 BCL9O00512 1426 aa17.92■□□□□ 0.46
COPS4-210ENST00000511708 GOLGB1Q14789 3259 aaKnown RBP17.92■□□□□ 0.46
COPS4-210ENST00000511708 MTFR1LQ9H019 292 aa17.92■□□□□ 0.46
COPS4-210ENST00000511708 POLR3AO14802 1390 aaPredicted RBP17.91■□□□□ 0.46
COPS4-210ENST00000511708 CRB1P82279 1406 aa17.91■□□□□ 0.46
COPS4-210ENST00000511708 GIGYF1O75420 1035 aaPredicted RBP17.91■□□□□ 0.46
COPS4-210ENST00000511708 MPHOSPH9Q99550 1183 aa17.91■□□□□ 0.46
COPS4-210ENST00000511708 SLC15A2Q16348 729 aa17.9■□□□□ 0.46
COPS4-210ENST00000511708 NUDT16Q96DE0 195 aaKnown RBP17.9■□□□□ 0.46
COPS4-210ENST00000511708 SHANK3Q9BYB0 1731 aa17.89■□□□□ 0.46
COPS4-210ENST00000511708 STK32BQ9NY57 414 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms