RNA–Protein interactions for RNA: ENST00000508800.1

NEDD9-212, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-212ENST00000508800 ALS2Q96Q42 1657 aa17.04■□□□□ 0.32
NEDD9-212ENST00000508800 KCNQ2O43526 872 aa17.04■□□□□ 0.32
NEDD9-212ENST00000508800 PLEKHG5O94827 1062 aa17.04■□□□□ 0.32
NEDD9-212ENST00000508800 IFFO2Q5TF58 517 aa17.03■□□□□ 0.32
NEDD9-212ENST00000508800 ADGRF5Q8IZF2 1346 aa17.02■□□□□ 0.32
NEDD9-212ENST00000508800 PIK3C2GO75747 1445 aa17.01■□□□□ 0.31
NEDD9-212ENST00000508800 CHD4Q14839 1912 aa17.01■□□□□ 0.31
NEDD9-212ENST00000508800 CRYBG1Q9Y4K1 1723 aa17.01■□□□□ 0.31
NEDD9-212ENST00000508800 GPRASP1Q5JY77 1395 aa17.01■□□□□ 0.31
NEDD9-212ENST00000508800 SPATA31A1Q5TZJ5 1347 aa17■□□□□ 0.31
NEDD9-212ENST00000508800 ZNF784Q8NCA9 323 aaPredicted RBP17■□□□□ 0.31
NEDD9-212ENST00000508800 PRDM11Q9NQV5 511 aa16.99■□□□□ 0.31
NEDD9-212ENST00000508800 CAMTA1Q9Y6Y1 1673 aa16.99■□□□□ 0.31
NEDD9-212ENST00000508800 RGPD3A6NKT7 1758 aaPredicted RBP16.99■□□□□ 0.31
NEDD9-212ENST00000508800 RGPD4Q7Z3J3 1758 aa16.99■□□□□ 0.31
NEDD9-212ENST00000508800 CEP350Q5VT06 3117 aa16.98■□□□□ 0.31
NEDD9-212ENST00000508800 SENP3-EIF4A1A0A087X0R7 540 aa16.98■□□□□ 0.31
NEDD9-212ENST00000508800 C11orf95C9JLR9 678 aaPredicted RBP16.98■□□□□ 0.31
NEDD9-212ENST00000508800 TMEM132EQ6IEE7 984 aa16.98■□□□□ 0.31
NEDD9-212ENST00000508800 EIF3AQ14152 1382 aaKnown RBP16.97■□□□□ 0.31
NEDD9-212ENST00000508800 PDE3BQ13370 1112 aa16.96■□□□□ 0.31
NEDD9-212ENST00000508800 SLC4A1APQ9BWU0 796 aaKnown RBP16.96■□□□□ 0.31
NEDD9-212ENST00000508800 SPATA31E1Q6ZUB1 1445 aa16.96■□□□□ 0.3
NEDD9-212ENST00000508800 DHX57Q6P158 1386 aaKnown RBP16.94■□□□□ 0.3
NEDD9-212ENST00000508800 BARGINQ6ZT62 677 aa16.94■□□□□ 0.3
NEDD9-212ENST00000508800 PMFBP1Q8TBY8 1022 aa16.94■□□□□ 0.3
NEDD9-212ENST00000508800 C1QTNF8P60827 252 aa16.93■□□□□ 0.3
NEDD9-212ENST00000508800 ACIN1Q9UKV3 1341 aaKnown RBP16.93■□□□□ 0.3
NEDD9-212ENST00000508800 CASZ1Q86V15 1759 aa16.92■□□□□ 0.3
NEDD9-212ENST00000508800 DLC1Q96QB1 1528 aa16.92■□□□□ 0.3
NEDD9-212ENST00000508800 NRKQ7Z2Y5 1582 aa16.92■□□□□ 0.3
NEDD9-212ENST00000508800 RGL3Q3MIN7 710 aa16.9■□□□□ 0.3
NEDD9-212ENST00000508800 KIAA0232Q92628 1395 aa16.89■□□□□ 0.3
NEDD9-212ENST00000508800 PHRF1Q9P1Y6 1649 aaKnown RBP16.89■□□□□ 0.29
NEDD9-212ENST00000508800 PRAM1Q96QH2 718 aa16.89■□□□□ 0.29
NEDD9-212ENST00000508800 C14orf93Q9H972 538 aaKnown RBP16.89■□□□□ 0.29
NEDD9-212ENST00000508800 TULP4Q9NRJ4 1543 aa16.89■□□□□ 0.29
NEDD9-212ENST00000508800 SSH2Q76I76 1423 aa16.88■□□□□ 0.29
NEDD9-212ENST00000508800 PARP4Q9UKK3 1724 aaKnown RBP16.88■□□□□ 0.29
NEDD9-212ENST00000508800 STRN4Q9NRL3 753 aa16.88■□□□□ 0.29
NEDD9-212ENST00000508800 MYOM1P52179 1685 aa16.88■□□□□ 0.29
NEDD9-212ENST00000508800 ATP7BP35670 1465 aa16.87■□□□□ 0.29
NEDD9-212ENST00000508800 POGKQ9P215 609 aa16.87■□□□□ 0.29
NEDD9-212ENST00000508800 THRAP3Q9Y2W1 955 aaKnown RBP16.87■□□□□ 0.29
NEDD9-212ENST00000508800 ITSN1Q15811 1721 aa16.87■□□□□ 0.29
NEDD9-212ENST00000508800 PLSCR1O15162 318 aa16.86■□□□□ 0.29
NEDD9-212ENST00000508800 SAFB2Q14151 953 aaKnown RBP eCLIP16.86■□□□□ 0.29
NEDD9-212ENST00000508800 TCP11L2Q8N4U5 519 aa16.86■□□□□ 0.29
NEDD9-212ENST00000508800 OVOS2A0A0G2JMS6 1433 aa16.86■□□□□ 0.29
NEDD9-212ENST00000508800 OVOS2A0A0J9YW53 1432 aa16.86■□□□□ 0.29
NEDD9-212ENST00000508800 OVOS2Q6IE36 1432 aa16.86■□□□□ 0.29
NEDD9-212ENST00000508800 PAK3O75914 559 aaPredicted RBP16.85■□□□□ 0.29
NEDD9-212ENST00000508800 EVA1CP58658 441 aa16.85■□□□□ 0.29
NEDD9-212ENST00000508800 NGDNQ8NEJ9 315 aaKnown RBP16.85■□□□□ 0.29
NEDD9-212ENST00000508800 USP35Q9P2H5 1018 aa16.85■□□□□ 0.29
NEDD9-212ENST00000508800 SBF2Q86WG5 1849 aa16.84■□□□□ 0.29
NEDD9-212ENST00000508800 CHRNA2Q15822 529 aa16.84■□□□□ 0.29
NEDD9-212ENST00000508800 PEAK1Q9H792 1746 aa16.82■□□□□ 0.28
NEDD9-212ENST00000508800 PTGER2P43116 358 aa16.81■□□□□ 0.28
NEDD9-212ENST00000508800 LMO7Q8WWI1 1683 aa16.81■□□□□ 0.28
NEDD9-212ENST00000508800 CPDO75976 1380 aa16.8■□□□□ 0.28
NEDD9-212ENST00000508800 PRR36Q9H6K5 1346 aa16.8■□□□□ 0.28
NEDD9-212ENST00000508800 ZC3H6P61129 1189 aaKnown RBP16.8■□□□□ 0.28
NEDD9-212ENST00000508800 SYT17Q9BSW7 474 aa16.8■□□□□ 0.28
NEDD9-212ENST00000508800 ANO8Q9HCE9 1232 aaPredicted RBP16.8■□□□□ 0.28
NEDD9-212ENST00000508800 GOLGB1Q14789 3259 aaKnown RBP16.8■□□□□ 0.28
NEDD9-212ENST00000508800 CFAP70Q5T0N1 1121 aa16.79■□□□□ 0.28
NEDD9-212ENST00000508800 MAP3K5Q99683 1374 aa16.78■□□□□ 0.28
NEDD9-212ENST00000508800 WASLO00401 505 aaPredicted RBP16.78■□□□□ 0.28
NEDD9-212ENST00000508800 GIGYF1O75420 1035 aaPredicted RBP16.78■□□□□ 0.28
NEDD9-212ENST00000508800 ZBTB7AO95365 584 aa16.78■□□□□ 0.28
NEDD9-212ENST00000508800 LARP1Q6PKG0 1096 aaKnown RBP16.78■□□□□ 0.28
NEDD9-212ENST00000508800 FHDC1Q9C0D6 1143 aaPredicted RBP16.78■□□□□ 0.28
NEDD9-212ENST00000508800 BCL11BQ9C0K0 894 aaPredicted RBP16.78■□□□□ 0.28
NEDD9-212ENST00000508800 HIRIP3Q9BW71 556 aaPredicted RBP16.76■□□□□ 0.27
NEDD9-212ENST00000508800 MTFR1LQ9H019 292 aa16.76■□□□□ 0.27
NEDD9-212ENST00000508800 ADGRB1O14514 1584 aa16.76■□□□□ 0.27
NEDD9-212ENST00000508800 MINK1Q8N4C8 1332 aaPredicted RBP16.75■□□□□ 0.27
NEDD9-212ENST00000508800 LRRC37A3O60309 1634 aa16.75■□□□□ 0.27
NEDD9-212ENST00000508800 STK32BQ9NY57 414 aa16.75■□□□□ 0.27
NEDD9-212ENST00000508800 BCL9O00512 1426 aa16.75■□□□□ 0.27
NEDD9-212ENST00000508800 CRB1P82279 1406 aa16.75■□□□□ 0.27
NEDD9-212ENST00000508800 ATF5Q9Y2D1 282 aaPredicted RBP16.74■□□□□ 0.27
NEDD9-212ENST00000508800 COL5A2P05997 1499 aaPredicted RBP16.73■□□□□ 0.27
NEDD9-212ENST00000508800 PDGFDQ9GZP0 370 aaPredicted RBP16.73■□□□□ 0.27
NEDD9-212ENST00000508800 AKAP12Q02952 1782 aa16.73■□□□□ 0.27
NEDD9-212ENST00000508800 DDB1Q16531 1140 aa16.72■□□□□ 0.27
NEDD9-212ENST00000508800 POLR3AO14802 1390 aaPredicted RBP16.72■□□□□ 0.27
NEDD9-212ENST00000508800 AATKQ6ZMQ8 1374 aa16.72■□□□□ 0.27
NEDD9-212ENST00000508800 USP19O94966 1318 aa16.71■□□□□ 0.27
NEDD9-212ENST00000508800 SLC15A2Q16348 729 aa16.71■□□□□ 0.27
NEDD9-212ENST00000508800 SGIP1Q9BQI5 828 aa16.71■□□□□ 0.27
NEDD9-212ENST00000508800 TRAK1Q9UPV9 953 aa16.71■□□□□ 0.27
NEDD9-212ENST00000508800 WNK3Q9BYP7 1800 aa16.7■□□□□ 0.26
NEDD9-212ENST00000508800 TOPAZ1Q8N9V7 1692 aa16.7■□□□□ 0.26
NEDD9-212ENST00000508800 ARXQ96QS3 562 aa16.7■□□□□ 0.26
NEDD9-212ENST00000508800 MPHOSPH9Q99550 1183 aa16.7■□□□□ 0.26
NEDD9-212ENST00000508800 NUTM2GQ5VZR2 741 aa16.69■□□□□ 0.26
NEDD9-212ENST00000508800 PROM2Q8N271 834 aa16.69■□□□□ 0.26
NEDD9-212ENST00000508800 NUDT16Q96DE0 195 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms