RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 TNS1Q9HBL0 1735 aaKnown RBP20.8■□□□□ 0.92
DDR1-260ENST00000507533 GPRASP1Q5JY77 1395 aa20.8■□□□□ 0.92
DDR1-260ENST00000507533 PRDM11Q9NQV5 511 aa20.79■□□□□ 0.92
DDR1-260ENST00000507533 POGKQ9P215 609 aa20.79■□□□□ 0.92
DDR1-260ENST00000507533 PARD3Q8TEW0 1356 aa20.79■□□□□ 0.92
DDR1-260ENST00000507533 THSD7AQ9UPZ6 1657 aa20.79■□□□□ 0.92
DDR1-260ENST00000507533 ADGRB2O60241 1585 aa20.78■□□□□ 0.92
DDR1-260ENST00000507533 SPATA31A1Q5TZJ5 1347 aa20.78■□□□□ 0.92
DDR1-260ENST00000507533 NBPF8Q3BBV2 869 aa20.77■□□□□ 0.92
DDR1-260ENST00000507533 NBPF14Q5TI25 921 aa20.77■□□□□ 0.92
DDR1-260ENST00000507533 ACIN1Q9UKV3 1341 aaKnown RBP20.77■□□□□ 0.91
DDR1-260ENST00000507533 DCAF8L1A6NGE4 600 aa20.75■□□□□ 0.91
DDR1-260ENST00000507533 PAK3O75914 559 aaPredicted RBP20.75■□□□□ 0.91
DDR1-260ENST00000507533 PPP1R1BQ9UD71 204 aaPredicted RBP20.75■□□□□ 0.91
DDR1-260ENST00000507533 TRPM3Q9HCF6 1732 aaPredicted RBP20.75■□□□□ 0.91
DDR1-260ENST00000507533 STRN4Q9NRL3 753 aa20.74■□□□□ 0.91
DDR1-260ENST00000507533 MPHOSPH9Q99550 1183 aa20.73■□□□□ 0.91
DDR1-260ENST00000507533 HIRIP3Q9BW71 556 aaPredicted RBP20.73■□□□□ 0.91
DDR1-260ENST00000507533 SPON1Q9HCB6 807 aa20.73■□□□□ 0.91
DDR1-260ENST00000507533 ALS2Q96Q42 1657 aa20.73■□□□□ 0.91
DDR1-260ENST00000507533 PDE3BQ13370 1112 aa20.72■□□□□ 0.91
DDR1-260ENST00000507533 CHRNA2Q15822 529 aa20.72■□□□□ 0.91
DDR1-260ENST00000507533 NGDNQ8NEJ9 315 aaKnown RBP20.72■□□□□ 0.91
DDR1-260ENST00000507533 USP35Q9P2H5 1018 aa20.71■□□□□ 0.91
DDR1-260ENST00000507533 PRR36Q9H6K5 1346 aa20.71■□□□□ 0.91
DDR1-260ENST00000507533 KIAA0232Q92628 1395 aa20.71■□□□□ 0.91
DDR1-260ENST00000507533 KCNQ2O43526 872 aa20.7■□□□□ 0.9
DDR1-260ENST00000507533 DLC1Q96QB1 1528 aa20.69■□□□□ 0.9
DDR1-260ENST00000507533 MINK1Q8N4C8 1332 aaPredicted RBP20.69■□□□□ 0.9
DDR1-260ENST00000507533 EIF3AQ14152 1382 aaKnown RBP20.69■□□□□ 0.9
DDR1-260ENST00000507533 EVA1CP58658 441 aa20.67■□□□□ 0.9
DDR1-260ENST00000507533 ZC3H6P61129 1189 aaKnown RBP20.67■□□□□ 0.9
DDR1-260ENST00000507533 BARGINQ6ZT62 677 aa20.67■□□□□ 0.9
DDR1-260ENST00000507533 TRAK1Q9UPV9 953 aa20.67■□□□□ 0.9
DDR1-260ENST00000507533 NINLQ9Y2I6 1382 aa20.67■□□□□ 0.9
DDR1-260ENST00000507533 WASLO00401 505 aaPredicted RBP20.66■□□□□ 0.9
DDR1-260ENST00000507533 RREB1Q92766 1687 aa20.66■□□□□ 0.9
DDR1-260ENST00000507533 NUP188Q5SRE5 1749 aa20.64■□□□□ 0.9
DDR1-260ENST00000507533 CRYBG1Q9Y4K1 1723 aa20.64■□□□□ 0.9
DDR1-260ENST00000507533 TULP4Q9NRJ4 1543 aa20.64■□□□□ 0.9
DDR1-260ENST00000507533 NUTM2GQ5VZR2 741 aa20.62■□□□□ 0.89
DDR1-260ENST00000507533 SSH2Q76I76 1423 aa20.61■□□□□ 0.89
DDR1-260ENST00000507533 LARP1Q6PKG0 1096 aaKnown RBP20.61■□□□□ 0.89
DDR1-260ENST00000507533 TCP11L2Q8N4U5 519 aa20.61■□□□□ 0.89
DDR1-260ENST00000507533 NUDT16Q96DE0 195 aaKnown RBP20.58■□□□□ 0.89
DDR1-260ENST00000507533 ADGRB1O14514 1584 aa20.58■□□□□ 0.88
DDR1-260ENST00000507533 THRAP3Q9Y2W1 955 aaKnown RBP20.57■□□□□ 0.88
DDR1-260ENST00000507533 C11orf95C9JLR9 678 aaPredicted RBP20.56■□□□□ 0.88
DDR1-260ENST00000507533 ZNF784Q8NCA9 323 aaPredicted RBP20.56■□□□□ 0.88
DDR1-260ENST00000507533 PHRF1Q9P1Y6 1649 aaKnown RBP20.56■□□□□ 0.88
DDR1-260ENST00000507533 ATP7BP35670 1465 aa20.56■□□□□ 0.88
DDR1-260ENST00000507533 CAMTA1Q9Y6Y1 1673 aa20.54■□□□□ 0.88
DDR1-260ENST00000507533 PLSCR1O15162 318 aa20.53■□□□□ 0.88
DDR1-260ENST00000507533 ANO8Q9HCE9 1232 aaPredicted RBP20.52■□□□□ 0.88
DDR1-260ENST00000507533 CPDO75976 1380 aa20.51■□□□□ 0.87
DDR1-260ENST00000507533 ZBTB7AO95365 584 aa20.51■□□□□ 0.87
DDR1-260ENST00000507533 ABTB2Q8N961 1025 aa20.51■□□□□ 0.87
DDR1-260ENST00000507533 PDGFDQ9GZP0 370 aaPredicted RBP20.51■□□□□ 0.87
DDR1-260ENST00000507533 KDM2AQ9Y2K7 1162 aa20.51■□□□□ 0.87
DDR1-260ENST00000507533 SENP3-EIF4A1A0A087X0R7 540 aa20.5■□□□□ 0.87
DDR1-260ENST00000507533 ACEP12821 1306 aa20.5■□□□□ 0.87
DDR1-260ENST00000507533 CDK19Q9BWU1 502 aa20.49■□□□□ 0.87
DDR1-260ENST00000507533 BCL11BQ9C0K0 894 aaPredicted RBP20.49■□□□□ 0.87
DDR1-260ENST00000507533 OVOS2A0A0G2JMS6 1433 aa20.49■□□□□ 0.87
DDR1-260ENST00000507533 OVOS2A0A0J9YW53 1432 aa20.49■□□□□ 0.87
DDR1-260ENST00000507533 OVOS2Q6IE36 1432 aa20.49■□□□□ 0.87
DDR1-260ENST00000507533 POLR3AO14802 1390 aaPredicted RBP20.48■□□□□ 0.87
DDR1-260ENST00000507533 NRKQ7Z2Y5 1582 aa20.48■□□□□ 0.87
DDR1-260ENST00000507533 PTGER2P43116 358 aa20.47■□□□□ 0.87
DDR1-260ENST00000507533 ATF5Q9Y2D1 282 aaPredicted RBP20.47■□□□□ 0.87
DDR1-260ENST00000507533 USP19O94966 1318 aa20.47■□□□□ 0.87
DDR1-260ENST00000507533 LMO7Q8WWI1 1683 aa20.46■□□□□ 0.87
DDR1-260ENST00000507533 GCP02774 474 aa20.46■□□□□ 0.87
DDR1-260ENST00000507533 PTF1AQ7RTS3 328 aa20.46■□□□□ 0.87
DDR1-260ENST00000507533 DCAF11Q8TEB1 546 aa20.46■□□□□ 0.87
DDR1-260ENST00000507533 CCDC61Q9Y6R9 512 aa20.46■□□□□ 0.87
DDR1-260ENST00000507533 ITSN1Q15811 1721 aa20.46■□□□□ 0.87
DDR1-260ENST00000507533 COL5A2P05997 1499 aaPredicted RBP20.45■□□□□ 0.86
DDR1-260ENST00000507533 PARP4Q9UKK3 1724 aaKnown RBP20.45■□□□□ 0.86
DDR1-260ENST00000507533 PLEKHG3A1L390 1219 aa20.45■□□□□ 0.86
DDR1-260ENST00000507533 DDB1Q16531 1140 aa20.45■□□□□ 0.86
DDR1-260ENST00000507533 NLRP13Q86W25 1043 aa20.45■□□□□ 0.86
DDR1-260ENST00000507533 PROM2Q8N271 834 aa20.45■□□□□ 0.86
DDR1-260ENST00000507533 CRB1P82279 1406 aa20.44■□□□□ 0.86
DDR1-260ENST00000507533 CASZ1Q86V15 1759 aa20.44■□□□□ 0.86
DDR1-260ENST00000507533 C1QTNF8P60827 252 aa20.44■□□□□ 0.86
DDR1-260ENST00000507533 ZBTB7CA1YPR0 619 aa20.43■□□□□ 0.86
DDR1-260ENST00000507533 SYT17Q9BSW7 474 aa20.43■□□□□ 0.86
DDR1-260ENST00000507533 FHDC1Q9C0D6 1143 aaPredicted RBP20.43■□□□□ 0.86
DDR1-260ENST00000507533 UTRNP46939 3433 aa20.43■□□□□ 0.86
DDR1-260ENST00000507533 PEAK1Q9H792 1746 aa20.42■□□□□ 0.86
DDR1-260ENST00000507533 STK32BQ9NY57 414 aa20.42■□□□□ 0.86
DDR1-260ENST00000507533 RGPD3A6NKT7 1758 aaPredicted RBP20.41■□□□□ 0.86
DDR1-260ENST00000507533 RGPD4Q7Z3J3 1758 aa20.41■□□□□ 0.86
DDR1-260ENST00000507533 MYOM1P52179 1685 aa20.41■□□□□ 0.86
DDR1-260ENST00000507533 SLC15A2Q16348 729 aa20.39■□□□□ 0.85
DDR1-260ENST00000507533 TOM1L2Q6ZVM7 507 aa20.39■□□□□ 0.85
DDR1-260ENST00000507533 MARCH10Q8NA82 808 aaPredicted RBP20.39■□□□□ 0.85
DDR1-260ENST00000507533 STAC3Q96MF2 364 aa20.39■□□□□ 0.85
DDR1-260ENST00000507533 TXNRD1Q16881 649 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms