RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.09□□□□□ -1.11
CLDND1-213ENST00000506927 SALL2Q9Y467 1007 aaPredicted RBP8.09□□□□□ -1.11
CLDND1-213ENST00000506927 MTUS2Q5JR59 1369 aa8.09□□□□□ -1.12
CLDND1-213ENST00000506927 FANCD2Q9BXW9 1451 aa8.08□□□□□ -1.12
CLDND1-213ENST00000506927 S1PR4O95977 384 aa8.08□□□□□ -1.12
CLDND1-213ENST00000506927 FDX1P10109 184 aa8.08□□□□□ -1.12
CLDND1-213ENST00000506927 Q3C1V9 767 aa8.08□□□□□ -1.12
CLDND1-213ENST00000506927 PCF11O94913 1555 aaKnown RBP8.07□□□□□ -1.12
CLDND1-213ENST00000506927 HFM1A2PYH4 1435 aa8.07□□□□□ -1.12
CLDND1-213ENST00000506927 FGD6Q6ZV73 1430 aa8.07□□□□□ -1.12
CLDND1-213ENST00000506927 GGCXP38435 758 aa8.07□□□□□ -1.12
CLDND1-213ENST00000506927 DDX10Q13206 875 aaKnown RBP8.07□□□□□ -1.12
CLDND1-213ENST00000506927 FAM160A2Q8N612 972 aaPredicted RBP8.07□□□□□ -1.12
CLDND1-213ENST00000506927 SLC6A16Q9GZN6 736 aa8.07□□□□□ -1.12
CLDND1-213ENST00000506927 ATP1B4Q9UN42 357 aaPredicted RBP8.07□□□□□ -1.12
CLDND1-213ENST00000506927 PCDHGC3Q9UN70 934 aa8.07□□□□□ -1.12
CLDND1-213ENST00000506927 PHLDB1Q86UU1 1377 aa8.07□□□□□ -1.12
CLDND1-213ENST00000506927 SUPT6HQ7KZ85 1726 aaKnown RBP8.06□□□□□ -1.12
CLDND1-213ENST00000506927 AKNAQ7Z591 1439 aa8.06□□□□□ -1.12
CLDND1-213ENST00000506927 DIXDC1Q155Q3 683 aa8.06□□□□□ -1.12
CLDND1-213ENST00000506927 NEUROD2Q15784 382 aa8.06□□□□□ -1.12
CLDND1-213ENST00000506927 SYMPKQ92797 1274 aaKnown RBP8.06□□□□□ -1.12
CLDND1-213ENST00000506927 FAM117AQ9C073 453 aa8.06□□□□□ -1.12
CLDND1-213ENST00000506927 EHBP1L1Q8N3D4 1523 aa8.05□□□□□ -1.12
CLDND1-213ENST00000506927 WDR97A6NE52 1622 aa8.05□□□□□ -1.12
CLDND1-213ENST00000506927 RNF223E7ERA6 249 aa8.05□□□□□ -1.12
CLDND1-213ENST00000506927 PPEF1O14829 653 aaPredicted RBP8.05□□□□□ -1.12
CLDND1-213ENST00000506927 LAMC3Q9Y6N6 1575 aa8.05□□□□□ -1.12
CLDND1-213ENST00000506927 BRPF1P55201 1214 aaPredicted RBP8.04□□□□□ -1.12
CLDND1-213ENST00000506927 MYSM1Q5VVJ2 828 aa8.04□□□□□ -1.12
CLDND1-213ENST00000506927 RSBN1LQ6PCB5 846 aaPredicted RBP8.04□□□□□ -1.12
CLDND1-213ENST00000506927 USB1Q9BQ65 265 aaKnown RBP8.04□□□□□ -1.12
CLDND1-213ENST00000506927 PRDM9Q9NQV7 894 aa8.04□□□□□ -1.12
CLDND1-213ENST00000506927 CDK11AQ9UQ88 783 aaPredicted RBP8.04□□□□□ -1.12
CLDND1-213ENST00000506927 MYOM3Q5VTT5 1437 aa8.03□□□□□ -1.12
CLDND1-213ENST00000506927 RIC3Q7Z5B4 369 aa8.03□□□□□ -1.12
CLDND1-213ENST00000506927 TOPBP1Q92547 1522 aa8.03□□□□□ -1.12
CLDND1-213ENST00000506927 MIA2Q96PC5 1412 aa8.03□□□□□ -1.12
CLDND1-213ENST00000506927 PLEKHG3A1L390 1219 aa8.02□□□□□ -1.13
CLDND1-213ENST00000506927 C6orf229H3BNL8 230 aa8.02□□□□□ -1.13
CLDND1-213ENST00000506927 SPTLC1O15269 473 aa8.02□□□□□ -1.13
CLDND1-213ENST00000506927 GJA5P36382 358 aa8.02□□□□□ -1.13
CLDND1-213ENST00000506927 MSS51Q4VC12 460 aa8.02□□□□□ -1.13
CLDND1-213ENST00000506927 DDRGK1Q96HY6 314 aa8.02□□□□□ -1.13
CLDND1-213ENST00000506927 PCDHB15Q9Y5E8 787 aa8.02□□□□□ -1.13
CLDND1-213ENST00000506927 PDS5BQ9NTI5 1447 aa8.02□□□□□ -1.13
CLDND1-213ENST00000506927 SAMD9Q5K651 1589 aa8.01□□□□□ -1.13
CLDND1-213ENST00000506927 PTPN23Q9H3S7 1636 aa8.01□□□□□ -1.13
CLDND1-213ENST00000506927 EIF4G2P78344 907 aaKnown RBP eCLIP8.01□□□□□ -1.13
CLDND1-213ENST00000506927 ANKLE1Q8NAG6 615 aa8.01□□□□□ -1.13
CLDND1-213ENST00000506927 RSPH6AQ9H0K4 717 aa8.01□□□□□ -1.13
CLDND1-213ENST00000506927 LIMD1Q9UGP4 676 aa8.01□□□□□ -1.13
CLDND1-213ENST00000506927 POLA1P09884 1462 aaPredicted RBP8□□□□□ -1.13
CLDND1-213ENST00000506927 CSPP1Q1MSJ5 1256 aa8□□□□□ -1.13
CLDND1-213ENST00000506927 ERICH6Q7L0X2 663 aa8□□□□□ -1.13
CLDND1-213ENST00000506927 RETREG3Q86VR2 466 aa8□□□□□ -1.13
CLDND1-213ENST00000506927 SIN3AQ96ST3 1273 aa8□□□□□ -1.13
CLDND1-213ENST00000506927 PRKD2Q9BZL6 878 aa8□□□□□ -1.13
CLDND1-213ENST00000506927 POLR3EQ9NVU0 708 aa8□□□□□ -1.13
CLDND1-213ENST00000506927 FHOD3Q2V2M9 1422 aa8□□□□□ -1.13
CLDND1-213ENST00000506927 MTMR2Q13614 643 aa7.99□□□□□ -1.13
CLDND1-213ENST00000506927 IRX2Q9BZI1 471 aaPredicted RBP7.99□□□□□ -1.13
CLDND1-213ENST00000506927 HECW1Q76N89 1606 aa7.99□□□□□ -1.13
CLDND1-213ENST00000506927 NCOA2Q15596 1464 aa7.99□□□□□ -1.13
CLDND1-213ENST00000506927 NAIPQ13075 1403 aa7.98□□□□□ -1.13
CLDND1-213ENST00000506927 MMP16P51512 607 aa7.98□□□□□ -1.13
CLDND1-213ENST00000506927 PLA2G2CQ5R387 149 aa7.98□□□□□ -1.13
CLDND1-213ENST00000506927 IL27Q8NEV9 243 aa7.98□□□□□ -1.13
CLDND1-213ENST00000506927 EMID1Q96A84 441 aaPredicted RBP7.98□□□□□ -1.13
CLDND1-213ENST00000506927 FCF1Q9Y324 198 aaKnown RBP7.98□□□□□ -1.13
CLDND1-213ENST00000506927 TCOF1Q13428 1488 aaKnown RBP7.98□□□□□ -1.13
CLDND1-213ENST00000506927 GAPVD1Q14C86 1478 aa7.98□□□□□ -1.13
CLDND1-213ENST00000506927 SNAPC4Q5SXM2 1469 aa7.98□□□□□ -1.13
CLDND1-213ENST00000506927 GCC2Q8IWJ2 1684 aa7.98□□□□□ -1.13
CLDND1-213ENST00000506927 ARID4BQ4LE39 1312 aaPredicted RBP7.98□□□□□ -1.13
CLDND1-213ENST00000506927 ROCK1Q13464 1354 aa7.97□□□□□ -1.13
CLDND1-213ENST00000506927 DXOO77932 396 aaKnown RBP7.97□□□□□ -1.13
CLDND1-213ENST00000506927 CLK2P49760 499 aaKnown RBP7.97□□□□□ -1.13
CLDND1-213ENST00000506927 CABLES1Q8TDN4 633 aa7.97□□□□□ -1.13
CLDND1-213ENST00000506927 GRIN2BQ13224 1484 aa7.97□□□□□ -1.13
CLDND1-213ENST00000506927 FANCIQ9NVI1 1328 aa7.97□□□□□ -1.13
CLDND1-213ENST00000506927 SPDYE5A6NIY4 337 aa7.96□□□□□ -1.14
CLDND1-213ENST00000506927 SKIV2LQ15477 1246 aaKnown RBP7.96□□□□□ -1.14
CLDND1-213ENST00000506927 QPCTQ16769 361 aa7.96□□□□□ -1.14
CLDND1-213ENST00000506927 TUSC1Q2TAM9 212 aa7.96□□□□□ -1.14
CLDND1-213ENST00000506927 PRPF38BQ5VTL8 546 aaKnown RBP7.96□□□□□ -1.14
CLDND1-213ENST00000506927 PRR7Q8TB68 274 aa7.96□□□□□ -1.14
CLDND1-213ENST00000506927 ZBTB3Q9H5J0 574 aa7.96□□□□□ -1.14
CLDND1-213ENST00000506927 PPP4R2Q9NY27 417 aa7.96□□□□□ -1.14
CLDND1-213ENST00000506927 V9GY48 417 aaPredicted RBP7.96□□□□□ -1.14
CLDND1-213ENST00000506927 UGGT2Q9NYU1 1516 aa7.96□□□□□ -1.14
CLDND1-213ENST00000506927 ABCA5Q8WWZ7 1642 aa7.96□□□□□ -1.14
CLDND1-213ENST00000506927 JUNDP17535 347 aa7.95□□□□□ -1.14
CLDND1-213ENST00000506927 SLC19A1P41440 591 aa7.95□□□□□ -1.14
CLDND1-213ENST00000506927 SH3D19Q5HYK7 790 aa7.95□□□□□ -1.14
CLDND1-213ENST00000506927 LIAT1Q6ZQX7 453 aa7.95□□□□□ -1.14
CLDND1-213ENST00000506927 RBM19Q9Y4C8 960 aaKnown RBP7.95□□□□□ -1.14
CLDND1-213ENST00000506927 ARHGEF11O15085 1522 aa7.94□□□□□ -1.14
CLDND1-213ENST00000506927 LILRB3O75022 631 aa7.94□□□□□ -1.14
CLDND1-213ENST00000506927 HNRNPUQ00839 825 aaKnown RBP eCLIP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms