RNA–Protein interactions for RNA: ENST00000504431.1

UBE2B-204, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 235 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-204ENST00000504431 MSS51Q4VC12 460 aa12.52□□□□□ -0.41
UBE2B-204ENST00000504431 TJAP1Q5JTD0 557 aa12.52□□□□□ -0.41
UBE2B-204ENST00000504431 TSC1Q92574 1164 aa12.52□□□□□ -0.41
UBE2B-204ENST00000504431 ADH1BP00325 375 aa12.51□□□□□ -0.41
UBE2B-204ENST00000504431 FBXO31Q5XUX0 539 aaPredicted RBP12.51□□□□□ -0.41
UBE2B-204ENST00000504431 SNAPC4Q5SXM2 1469 aa12.51□□□□□ -0.41
UBE2B-204ENST00000504431 CFAP99D6REC4 459 aa12.5□□□□□ -0.41
UBE2B-204ENST00000504431 MCM6Q14566 821 aa12.5□□□□□ -0.41
UBE2B-204ENST00000504431 PBRM1Q86U86 1689 aa12.5□□□□□ -0.41
UBE2B-204ENST00000504431 ABCA5Q8WWZ7 1642 aa12.49□□□□□ -0.41
UBE2B-204ENST00000504431 USP17L8P0C7I0 530 aa12.49□□□□□ -0.41
UBE2B-204ENST00000504431 CHD1O14646 1710 aa12.48□□□□□ -0.41
UBE2B-204ENST00000504431 GRIN2BQ13224 1484 aa12.48□□□□□ -0.41
UBE2B-204ENST00000504431 ITGBL1O95965 494 aaPredicted RBP12.47□□□□□ -0.41
UBE2B-204ENST00000504431 JUNDP17535 347 aa12.47□□□□□ -0.41
UBE2B-204ENST00000504431 KCNC4Q03721 635 aa12.47□□□□□ -0.41
UBE2B-204ENST00000504431 PRM3Q9NNZ6 103 aa12.47□□□□□ -0.41
UBE2B-204ENST00000504431 CHMP7Q8WUX9 453 aaPredicted RBP12.46□□□□□ -0.41
UBE2B-204ENST00000504431 TLL1O43897 1013 aa12.45□□□□□ -0.42
UBE2B-204ENST00000504431 RUSC2Q8N2Y8 1516 aa12.45□□□□□ -0.42
UBE2B-204ENST00000504431 UBTFP17480 764 aaKnown RBP12.44□□□□□ -0.42
UBE2B-204ENST00000504431 CTDSPL2Q05D32 466 aa12.43□□□□□ -0.42
UBE2B-204ENST00000504431 PTPRNQ16849 979 aa12.43□□□□□ -0.42
UBE2B-204ENST00000504431 ZNF516Q92618 1163 aa12.43□□□□□ -0.42
UBE2B-204ENST00000504431 SLC6A16Q9GZN6 736 aa12.43□□□□□ -0.42
UBE2B-204ENST00000504431 RAD21O60216 631 aa12.42□□□□□ -0.42
UBE2B-204ENST00000504431 LYPD8Q6UX82 237 aa12.42□□□□□ -0.42
UBE2B-204ENST00000504431 FAM160A2Q8N612 972 aaPredicted RBP12.42□□□□□ -0.42
UBE2B-204ENST00000504431 MAGI1Q96QZ7 1491 aaPredicted RBP12.41□□□□□ -0.42
UBE2B-204ENST00000504431 DXOO77932 396 aaKnown RBP12.41□□□□□ -0.42
UBE2B-204ENST00000504431 MMP16P51512 607 aa12.41□□□□□ -0.42
UBE2B-204ENST00000504431 SNRKQ9NRH2 765 aa12.41□□□□□ -0.42
UBE2B-204ENST00000504431 TIMELESSQ9UNS1 1208 aa12.41□□□□□ -0.42
UBE2B-204ENST00000504431 KIF27Q86VH2 1401 aa12.4□□□□□ -0.42
UBE2B-204ENST00000504431 MTMR14Q8NCE2 650 aa12.4□□□□□ -0.42
UBE2B-204ENST00000504431 PNMA1Q8ND90 353 aa12.4□□□□□ -0.42
UBE2B-204ENST00000504431 SYNJ2O15056 1496 aa12.4□□□□□ -0.43
UBE2B-204ENST00000504431 GGCXP38435 758 aa12.39□□□□□ -0.43
UBE2B-204ENST00000504431 FAM9AQ8IZU1 332 aaPredicted RBP12.38□□□□□ -0.43
UBE2B-204ENST00000504431 IGF1RP08069 1367 aa12.38□□□□□ -0.43
UBE2B-204ENST00000504431 ADAMTS12P58397 1594 aa12.38□□□□□ -0.43
UBE2B-204ENST00000504431 CCNYL3P0C7X3 344 aa12.37□□□□□ -0.43
UBE2B-204ENST00000504431 NUDT12Q9BQG2 462 aa12.37□□□□□ -0.43
UBE2B-204ENST00000504431 PRDM9Q9NQV7 894 aa12.37□□□□□ -0.43
UBE2B-204ENST00000504431 NDUFB9Q9Y6M9 179 aa12.37□□□□□ -0.43
UBE2B-204ENST00000504431 ERICH3Q5RHP9 1530 aa12.37□□□□□ -0.43
UBE2B-204ENST00000504431 WWC1Q8IX03 1113 aa12.36□□□□□ -0.43
UBE2B-204ENST00000504431 LRRN4Q8WUT4 740 aa12.36□□□□□ -0.43
UBE2B-204ENST00000504431 ZMYND15Q9H091 742 aa12.36□□□□□ -0.43
UBE2B-204ENST00000504431 PER1O15534 1290 aaPredicted RBP12.35□□□□□ -0.43
UBE2B-204ENST00000504431 FHAD1B1AJZ9 1412 aa12.35□□□□□ -0.43
UBE2B-204ENST00000504431 GRIN2AQ12879 1464 aa12.34□□□□□ -0.43
UBE2B-204ENST00000504431 S1PR4O95977 384 aa12.34□□□□□ -0.43
UBE2B-204ENST00000504431 NKX2-3Q8TAU0 364 aa12.34□□□□□ -0.43
UBE2B-204ENST00000504431 A6NJR5 290 aa12.33□□□□□ -0.44
UBE2B-204ENST00000504431 IFFO2Q5TF58 517 aa12.33□□□□□ -0.44
UBE2B-204ENST00000504431 HMX1Q9NP08 348 aaPredicted RBP12.33□□□□□ -0.44
UBE2B-204ENST00000504431 F12P00748 615 aaPredicted RBP12.32□□□□□ -0.44
UBE2B-204ENST00000504431 GJD4Q96KN9 370 aaPredicted RBP12.32□□□□□ -0.44
UBE2B-204ENST00000504431 CARMIL1Q5VZK9 1371 aa12.31□□□□□ -0.44
UBE2B-204ENST00000504431 CTHP32929 405 aa12.31□□□□□ -0.44
UBE2B-204ENST00000504431 EVA1BQ9NVM1 165 aa12.31□□□□□ -0.44
UBE2B-204ENST00000504431 COG6Q9Y2V7 657 aa12.31□□□□□ -0.44
UBE2B-204ENST00000504431 CEP170Q5SW79 1584 aa12.3□□□□□ -0.44
UBE2B-204ENST00000504431 KCNH2Q12809 1159 aa12.3□□□□□ -0.44
UBE2B-204ENST00000504431 ARMC2Q8NEN0 867 aa12.3□□□□□ -0.44
UBE2B-204ENST00000504431 NR6A1Q15406 480 aa12.29□□□□□ -0.44
UBE2B-204ENST00000504431 CCDC24Q8N4L8 307 aa12.29□□□□□ -0.44
UBE2B-204ENST00000504431 TRIM34Q9BYJ4 488 aa12.29□□□□□ -0.44
UBE2B-204ENST00000504431 ZC3H4Q9UPT8 1303 aaKnown RBP12.29□□□□□ -0.44
UBE2B-204ENST00000504431 CLASP1Q7Z460 1538 aa12.28□□□□□ -0.44
UBE2B-204ENST00000504431 FCF1Q9Y324 198 aaKnown RBP12.28□□□□□ -0.44
UBE2B-204ENST00000504431 RIMBP3CA6NJZ7 1639 aa12.27□□□□□ -0.44
UBE2B-204ENST00000504431 RIMBP3BA6NNM3 1639 aa12.27□□□□□ -0.44
UBE2B-204ENST00000504431 RIMBP3Q9UFD9 1639 aa12.27□□□□□ -0.44
UBE2B-204ENST00000504431 CUL7Q14999 1698 aa12.27□□□□□ -0.45
UBE2B-204ENST00000504431 PROSER2Q86WR7 435 aaPredicted RBP12.27□□□□□ -0.45
UBE2B-204ENST00000504431 ANKLE1Q8NAG6 615 aa12.27□□□□□ -0.45
UBE2B-204ENST00000504431 CLUAP1Q96AJ1 413 aa12.27□□□□□ -0.45
UBE2B-204ENST00000504431 GDPD2Q9HCC8 539 aa12.27□□□□□ -0.45
UBE2B-204ENST00000504431 MAP10Q9P2G4 905 aa12.27□□□□□ -0.45
UBE2B-204ENST00000504431 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.26□□□□□ -0.45
UBE2B-204ENST00000504431 TBC1D2BQ9UPU7 963 aa12.26□□□□□ -0.45
UBE2B-204ENST00000504431 NUP160Q12769 1436 aa12.26□□□□□ -0.45
UBE2B-204ENST00000504431 ARHGEF11O15085 1522 aa12.26□□□□□ -0.45
UBE2B-204ENST00000504431 ABL2P42684 1182 aa12.25□□□□□ -0.45
UBE2B-204ENST00000504431 NBPF14Q5TI25 921 aa12.25□□□□□ -0.45
UBE2B-204ENST00000504431 GPKOWQ92917 476 aaPredicted RBP eCLIP12.25□□□□□ -0.45
UBE2B-204ENST00000504431 POM121Q96HA1 1249 aa12.25□□□□□ -0.45
UBE2B-204ENST00000504431 FKBPLQ9UIM3 349 aa12.25□□□□□ -0.45
UBE2B-204ENST00000504431 CYB5RLQ6IPT4 315 aa12.24□□□□□ -0.45
UBE2B-204ENST00000504431 PLA2G2EQ9NZK7 142 aa12.24□□□□□ -0.45
UBE2B-204ENST00000504431 ERCC6L2Q5T890 1561 aa12.23□□□□□ -0.45
UBE2B-204ENST00000504431 RNF223E7ERA6 249 aa12.23□□□□□ -0.45
UBE2B-204ENST00000504431 ZBTB24O43167 697 aaPredicted RBP12.23□□□□□ -0.45
UBE2B-204ENST00000504431 PPP1R18Q6NYC8 613 aa12.23□□□□□ -0.45
UBE2B-204ENST00000504431 WASHC4Q2M389 1173 aa12.22□□□□□ -0.45
UBE2B-204ENST00000504431 EPS8L1Q8TE68 723 aa12.22□□□□□ -0.45
UBE2B-204ENST00000504431 UNC93B1Q9H1C4 597 aa12.22□□□□□ -0.45
UBE2B-204ENST00000504431 RAPGEF2Q9Y4G8 1499 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms