RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 GPRASP1Q5JY77 1395 aa23.69■■□□□ 1.38
PDLIM7-210ENST00000503827 FAM196AQ6ZSG2 479 aa23.69■■□□□ 1.38
PDLIM7-210ENST00000503827 PRAM1Q96QH2 718 aa23.69■■□□□ 1.38
PDLIM7-210ENST00000503827 PARD3Q8TEW0 1356 aa23.68■■□□□ 1.38
PDLIM7-210ENST00000503827 TRIM37O94972 964 aa23.68■■□□□ 1.38
PDLIM7-210ENST00000503827 CRYBG1Q9Y4K1 1723 aa23.67■■□□□ 1.38
PDLIM7-210ENST00000503827 APBA3O96018 575 aa23.66■■□□□ 1.38
PDLIM7-210ENST00000503827 POGKQ9P215 609 aa23.66■■□□□ 1.38
PDLIM7-210ENST00000503827 RREB1Q92766 1687 aa23.65■■□□□ 1.38
PDLIM7-210ENST00000503827 PRDM11Q9NQV5 511 aa23.65■■□□□ 1.38
PDLIM7-210ENST00000503827 CFAP70Q5T0N1 1121 aa23.64■■□□□ 1.37
PDLIM7-210ENST00000503827 SPATA31A1Q5TZJ5 1347 aa23.63■■□□□ 1.37
PDLIM7-210ENST00000503827 DCAF8L1A6NGE4 600 aa23.63■■□□□ 1.37
PDLIM7-210ENST00000503827 NBPF8Q3BBV2 869 aa23.63■■□□□ 1.37
PDLIM7-210ENST00000503827 NUP188Q5SRE5 1749 aa23.63■■□□□ 1.37
PDLIM7-210ENST00000503827 NBPF14Q5TI25 921 aa23.63■■□□□ 1.37
PDLIM7-210ENST00000503827 DLC1Q96QB1 1528 aa23.63■■□□□ 1.37
PDLIM7-210ENST00000503827 ACIN1Q9UKV3 1341 aaKnown RBP23.62■■□□□ 1.37
PDLIM7-210ENST00000503827 EIF3AQ14152 1382 aaKnown RBP23.61■■□□□ 1.37
PDLIM7-210ENST00000503827 PAK3O75914 559 aaPredicted RBP23.6■■□□□ 1.37
PDLIM7-210ENST00000503827 PPP1R1BQ9UD71 204 aaPredicted RBP23.6■■□□□ 1.37
PDLIM7-210ENST00000503827 MPHOSPH9Q99550 1183 aa23.59■■□□□ 1.37
PDLIM7-210ENST00000503827 STRN4Q9NRL3 753 aa23.58■■□□□ 1.37
PDLIM7-210ENST00000503827 PDE3BQ13370 1112 aa23.57■■□□□ 1.36
PDLIM7-210ENST00000503827 NGDNQ8NEJ9 315 aaKnown RBP23.57■■□□□ 1.36
PDLIM7-210ENST00000503827 HIRIP3Q9BW71 556 aaPredicted RBP23.57■■□□□ 1.36
PDLIM7-210ENST00000503827 SPON1Q9HCB6 807 aa23.57■■□□□ 1.36
PDLIM7-210ENST00000503827 TULP4Q9NRJ4 1543 aa23.57■■□□□ 1.36
PDLIM7-210ENST00000503827 KIAA0232Q92628 1395 aa23.56■■□□□ 1.36
PDLIM7-210ENST00000503827 PRR36Q9H6K5 1346 aa23.55■■□□□ 1.36
PDLIM7-210ENST00000503827 PHRF1Q9P1Y6 1649 aaKnown RBP23.55■■□□□ 1.36
PDLIM7-210ENST00000503827 CHRNA2Q15822 529 aa23.54■■□□□ 1.36
PDLIM7-210ENST00000503827 USP35Q9P2H5 1018 aa23.54■■□□□ 1.36
PDLIM7-210ENST00000503827 MINK1Q8N4C8 1332 aaPredicted RBP23.54■■□□□ 1.36
PDLIM7-210ENST00000503827 NINLQ9Y2I6 1382 aa23.53■■□□□ 1.36
PDLIM7-210ENST00000503827 KCNQ2O43526 872 aa23.53■■□□□ 1.36
PDLIM7-210ENST00000503827 BARGINQ6ZT62 677 aa23.52■■□□□ 1.36
PDLIM7-210ENST00000503827 ITSN1Q15811 1721 aa23.52■■□□□ 1.36
PDLIM7-210ENST00000503827 WASLO00401 505 aaPredicted RBP23.51■■□□□ 1.35
PDLIM7-210ENST00000503827 EVA1CP58658 441 aa23.51■■□□□ 1.35
PDLIM7-210ENST00000503827 TRAK1Q9UPV9 953 aa23.51■■□□□ 1.35
PDLIM7-210ENST00000503827 ZC3H6P61129 1189 aaKnown RBP23.5■■□□□ 1.35
PDLIM7-210ENST00000503827 ADGRB1O14514 1584 aa23.48■■□□□ 1.35
PDLIM7-210ENST00000503827 SSH2Q76I76 1423 aa23.48■■□□□ 1.35
PDLIM7-210ENST00000503827 ATP7BP35670 1465 aa23.47■■□□□ 1.35
PDLIM7-210ENST00000503827 CAMTA1Q9Y6Y1 1673 aa23.47■■□□□ 1.35
PDLIM7-210ENST00000503827 TCP11L2Q8N4U5 519 aa23.45■■□□□ 1.34
PDLIM7-210ENST00000503827 C11orf95C9JLR9 678 aaPredicted RBP23.43■■□□□ 1.34
PDLIM7-210ENST00000503827 RGPD3A6NKT7 1758 aaPredicted RBP23.42■■□□□ 1.34
PDLIM7-210ENST00000503827 RGPD4Q7Z3J3 1758 aa23.42■■□□□ 1.34
PDLIM7-210ENST00000503827 PARP4Q9UKK3 1724 aaKnown RBP23.42■■□□□ 1.34
PDLIM7-210ENST00000503827 NUTM2GQ5VZR2 741 aa23.42■■□□□ 1.34
PDLIM7-210ENST00000503827 LARP1Q6PKG0 1096 aaKnown RBP23.42■■□□□ 1.34
PDLIM7-210ENST00000503827 THRAP3Q9Y2W1 955 aaKnown RBP23.42■■□□□ 1.34
PDLIM7-210ENST00000503827 NUDT16Q96DE0 195 aaKnown RBP23.4■■□□□ 1.34
PDLIM7-210ENST00000503827 LMO7Q8WWI1 1683 aa23.39■■□□□ 1.34
PDLIM7-210ENST00000503827 NRKQ7Z2Y5 1582 aa23.39■■□□□ 1.33
PDLIM7-210ENST00000503827 SBF2Q86WG5 1849 aa23.38■■□□□ 1.33
PDLIM7-210ENST00000503827 CASZ1Q86V15 1759 aa23.38■■□□□ 1.33
PDLIM7-210ENST00000503827 PLSCR1O15162 318 aa23.36■■□□□ 1.33
PDLIM7-210ENST00000503827 CPDO75976 1380 aa23.36■■□□□ 1.33
PDLIM7-210ENST00000503827 ARHGEF28Q8N1W1 1705 aaKnown RBP23.36■■□□□ 1.33
PDLIM7-210ENST00000503827 OVOS2A0A0G2JMS6 1433 aa23.35■■□□□ 1.33
PDLIM7-210ENST00000503827 OVOS2A0A0J9YW53 1432 aa23.35■■□□□ 1.33
PDLIM7-210ENST00000503827 OVOS2Q6IE36 1432 aa23.35■■□□□ 1.33
PDLIM7-210ENST00000503827 ZNF784Q8NCA9 323 aaPredicted RBP23.35■■□□□ 1.33
PDLIM7-210ENST00000503827 PEAK1Q9H792 1746 aa23.34■■□□□ 1.33
PDLIM7-210ENST00000503827 ABTB2Q8N961 1025 aa23.34■■□□□ 1.33
PDLIM7-210ENST00000503827 TOPAZ1Q8N9V7 1692 aa23.33■■□□□ 1.33
PDLIM7-210ENST00000503827 POLR3AO14802 1390 aaPredicted RBP23.33■■□□□ 1.33
PDLIM7-210ENST00000503827 CHD4Q14839 1912 aa23.33■■□□□ 1.32
PDLIM7-210ENST00000503827 ACEP12821 1306 aa23.33■■□□□ 1.32
PDLIM7-210ENST00000503827 KDM2AQ9Y2K7 1162 aa23.32■■□□□ 1.32
PDLIM7-210ENST00000503827 MYOM1P52179 1685 aa23.32■■□□□ 1.32
PDLIM7-210ENST00000503827 ANO8Q9HCE9 1232 aaPredicted RBP23.31■■□□□ 1.32
PDLIM7-210ENST00000503827 COL5A2P05997 1499 aaPredicted RBP23.3■■□□□ 1.32
PDLIM7-210ENST00000503827 CDK19Q9BWU1 502 aa23.3■■□□□ 1.32
PDLIM7-210ENST00000503827 BCL11BQ9C0K0 894 aaPredicted RBP23.3■■□□□ 1.32
PDLIM7-210ENST00000503827 CRB1P82279 1406 aa23.3■■□□□ 1.32
PDLIM7-210ENST00000503827 DCAF11Q8TEB1 546 aa23.29■■□□□ 1.32
PDLIM7-210ENST00000503827 CCDC61Q9Y6R9 512 aa23.29■■□□□ 1.32
PDLIM7-210ENST00000503827 LRRC37A3O60309 1634 aa23.29■■□□□ 1.32
PDLIM7-210ENST00000503827 USP19O94966 1318 aa23.29■■□□□ 1.32
PDLIM7-210ENST00000503827 SENP3-EIF4A1A0A087X0R7 540 aa23.28■■□□□ 1.32
PDLIM7-210ENST00000503827 ZBTB7AO95365 584 aa23.28■■□□□ 1.32
PDLIM7-210ENST00000503827 NLRP13Q86W25 1043 aa23.28■■□□□ 1.32
PDLIM7-210ENST00000503827 GCP02774 474 aa23.27■■□□□ 1.32
PDLIM7-210ENST00000503827 DDB1Q16531 1140 aa23.27■■□□□ 1.32
PDLIM7-210ENST00000503827 PDGFDQ9GZP0 370 aaPredicted RBP23.27■■□□□ 1.32
PDLIM7-210ENST00000503827 PLEKHG3A1L390 1219 aa23.26■■□□□ 1.31
PDLIM7-210ENST00000503827 STAC3Q96MF2 364 aa23.26■■□□□ 1.31
PDLIM7-210ENST00000503827 AKAP12Q02952 1782 aa23.25■■□□□ 1.31
PDLIM7-210ENST00000503827 PTGER2P43116 358 aa23.25■■□□□ 1.31
PDLIM7-210ENST00000503827 ATF5Q9Y2D1 282 aaPredicted RBP23.24■■□□□ 1.31
PDLIM7-210ENST00000503827 WNK3Q9BYP7 1800 aa23.23■■□□□ 1.31
PDLIM7-210ENST00000503827 ZBTB7CA1YPR0 619 aa23.22■■□□□ 1.31
PDLIM7-210ENST00000503827 C1QTNF8P60827 252 aa23.22■■□□□ 1.31
PDLIM7-210ENST00000503827 PROM2Q8N271 834 aa23.22■■□□□ 1.31
PDLIM7-210ENST00000503827 SYT17Q9BSW7 474 aa23.22■■□□□ 1.31
PDLIM7-210ENST00000503827 FHDC1Q9C0D6 1143 aaPredicted RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms