RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 ERCC6Q03468 1493 aa14.11□□□□□ -0.15
PBX1-211ENST00000498497 PRXQ9BXM0 1461 aa14.11□□□□□ -0.15
PBX1-211ENST00000498497 IBSPP21815 317 aaPredicted RBP14.11□□□□□ -0.15
PBX1-211ENST00000498497 FAM43BQ6ZT52 329 aaPredicted RBP14.11□□□□□ -0.15
PBX1-211ENST00000498497 GADD45BO75293 160 aaPredicted RBP14.1□□□□□ -0.15
PBX1-211ENST00000498497 ELF2Q15723 593 aa14.1□□□□□ -0.15
PBX1-211ENST00000498497 KMT5BQ4FZB7 885 aa14.1□□□□□ -0.15
PBX1-211ENST00000498497 CCDC112Q8NEF3 446 aa14.1□□□□□ -0.15
PBX1-211ENST00000498497 PTGS1P23219 599 aa14.1□□□□□ -0.15
PBX1-211ENST00000498497 CCDC191Q8NCU4 936 aa14.1□□□□□ -0.15
PBX1-211ENST00000498497 SLC20A2Q08357 652 aa14.09□□□□□ -0.15
PBX1-211ENST00000498497 KIF2CQ99661 725 aa14.09□□□□□ -0.15
PBX1-211ENST00000498497 C1orf115Q9H7X2 142 aa14.09□□□□□ -0.15
PBX1-211ENST00000498497 ZCCHC17Q9NP64 241 aaKnown RBP14.09□□□□□ -0.15
PBX1-211ENST00000498497 KCNF1Q9H3M0 494 aa14.08□□□□□ -0.16
PBX1-211ENST00000498497 PKD2Q13563 968 aa14.08□□□□□ -0.16
PBX1-211ENST00000498497 GORABQ5T7V8 394 aa14.08□□□□□ -0.16
PBX1-211ENST00000498497 ANKRD45Q5TZF3 282 aa14.08□□□□□ -0.16
PBX1-211ENST00000498497 MYCBPQ99417 103 aaPredicted RBP14.08□□□□□ -0.16
PBX1-211ENST00000498497 GEMIN8Q9NWZ8 242 aaKnown RBP14.08□□□□□ -0.16
PBX1-211ENST00000498497 PDE3AQ14432 1141 aa14.07□□□□□ -0.16
PBX1-211ENST00000498497 SMC4Q9NTJ3 1288 aa14.07□□□□□ -0.16
PBX1-211ENST00000498497 TULP1O00294 542 aaPredicted RBP14.07□□□□□ -0.16
PBX1-211ENST00000498497 TPD52L1Q16890 204 aaPredicted RBP14.07□□□□□ -0.16
PBX1-211ENST00000498497 FBXO38Q6PIJ6 1188 aa14.07□□□□□ -0.16
PBX1-211ENST00000498497 MYO1CO00159 1063 aa14.06□□□□□ -0.16
PBX1-211ENST00000498497 SNX21Q969T3 373 aa14.06□□□□□ -0.16
PBX1-211ENST00000498497 TRMT1Q9NXH9 659 aaKnown RBP14.06□□□□□ -0.16
PBX1-211ENST00000498497 ZNF215Q9UL58 517 aaPredicted RBP14.06□□□□□ -0.16
PBX1-211ENST00000498497 ROCK2O75116 1388 aaKnown RBP14.06□□□□□ -0.16
PBX1-211ENST00000498497 KIF21AQ7Z4S6 1674 aa14.06□□□□□ -0.16
PBX1-211ENST00000498497 PDE6BP35913 854 aa14.06□□□□□ -0.16
PBX1-211ENST00000498497 ST5P78524 1137 aa14.06□□□□□ -0.16
PBX1-211ENST00000498497 ICE2Q659A1 982 aa14.06□□□□□ -0.16
PBX1-211ENST00000498497 LRRFIP2Q9Y608 721 aaKnown RBP14.06□□□□□ -0.16
PBX1-211ENST00000498497 GOLGA6L6A8MZA4 724 aa14.05□□□□□ -0.16
PBX1-211ENST00000498497 NUCB2P80303 420 aa14.05□□□□□ -0.16
PBX1-211ENST00000498497 PRPF38AQ8NAV1 312 aaKnown RBP14.05□□□□□ -0.16
PBX1-211ENST00000498497 BCCIPQ9P287 314 aaKnown RBP eCLIP14.05□□□□□ -0.16
PBX1-211ENST00000498497 KNSTRNQ9Y448 316 aa14.05□□□□□ -0.16
PBX1-211ENST00000498497 PARD3Q8TEW0 1356 aa14.04□□□□□ -0.16
PBX1-211ENST00000498497 ANKRD30BQ9BXX2 1392 aa14.04□□□□□ -0.16
PBX1-211ENST00000498497 PPP2R1AP30153 589 aa14.04□□□□□ -0.16
PBX1-211ENST00000498497 NOP2P46087 812 aaKnown RBP14.04□□□□□ -0.16
PBX1-211ENST00000498497 GIMAP6Q6P9H5 292 aa14.04□□□□□ -0.16
PBX1-211ENST00000498497 TBC1D9Q6ZT07 1266 aa14.04□□□□□ -0.16
PBX1-211ENST00000498497 KDM6BO15054 1643 aa14.04□□□□□ -0.16
PBX1-211ENST00000498497 KIAA1524Q8TCG1 905 aa14.04□□□□□ -0.16
PBX1-211ENST00000498497 NRBP1Q9UHY1 535 aa14.04□□□□□ -0.16
PBX1-211ENST00000498497 PER1O15534 1290 aaPredicted RBP14.04□□□□□ -0.16
PBX1-211ENST00000498497 RBM6P78332 1123 aaKnown RBP14.04□□□□□ -0.16
PBX1-211ENST00000498497 POLKQ9UBT6 870 aa14.04□□□□□ -0.16
PBX1-211ENST00000498497 MORC2Q9Y6X9 1032 aaPredicted RBP14.04□□□□□ -0.16
PBX1-211ENST00000498497 ZNF446Q9NWS9 450 aa14.03□□□□□ -0.16
PBX1-211ENST00000498497 EXOC6BQ9Y2D4 811 aa14.03□□□□□ -0.16
PBX1-211ENST00000498497 IBTKQ9P2D0 1353 aaPredicted RBP14.03□□□□□ -0.16
PBX1-211ENST00000498497 VGFO15240 615 aaPredicted RBP14.03□□□□□ -0.16
PBX1-211ENST00000498497 TSPYL1Q9H0U9 437 aa14.03□□□□□ -0.16
PBX1-211ENST00000498497 ZNF777Q9ULD5 760 aaPredicted RBP14.03□□□□□ -0.16
PBX1-211ENST00000498497 ZDHHC9Q9Y397 364 aa14.03□□□□□ -0.16
PBX1-211ENST00000498497 MIA2Q96PC5 1412 aa14.03□□□□□ -0.16
PBX1-211ENST00000498497 NESP48681 1621 aa14.02□□□□□ -0.16
PBX1-211ENST00000498497 MMP14P50281 582 aa14.02□□□□□ -0.16
PBX1-211ENST00000498497 CCDC27Q2M243 656 aa14.02□□□□□ -0.16
PBX1-211ENST00000498497 NKTRP30414 1462 aaKnown RBP14.02□□□□□ -0.16
PBX1-211ENST00000498497 AP5Z1O43299 807 aa14.02□□□□□ -0.17
PBX1-211ENST00000498497 RARSP54136 660 aaKnown RBP14.02□□□□□ -0.17
PBX1-211ENST00000498497 CCDC186Q7Z3E2 898 aa14.02□□□□□ -0.17
PBX1-211ENST00000498497 NFATC2IPQ8NCF5 419 aa14.02□□□□□ -0.17
PBX1-211ENST00000498497 CCDC34Q96HJ3 373 aa14.02□□□□□ -0.17
PBX1-211ENST00000498497 CFTRP13569 1480 aa14.02□□□□□ -0.17
PBX1-211ENST00000498497 SRRTQ9BXP5 876 aaKnown RBP14.01□□□□□ -0.17
PBX1-211ENST00000498497 EFCC1Q9HA90 598 aa14.01□□□□□ -0.17
PBX1-211ENST00000498497 NCOA3Q9Y6Q9 1424 aa14.01□□□□□ -0.17
PBX1-211ENST00000498497 NCAPGQ9BPX3 1015 aa14.01□□□□□ -0.17
PBX1-211ENST00000498497 PLEKHA4Q9H4M7 779 aa14.01□□□□□ -0.17
PBX1-211ENST00000498497 ZMYM4Q5VZL5 1548 aa14.01□□□□□ -0.17
PBX1-211ENST00000498497 CTIFO43310 598 aaKnown RBP14.01□□□□□ -0.17
PBX1-211ENST00000498497 C14orf37Q86TY3 774 aa14.01□□□□□ -0.17
PBX1-211ENST00000498497 TSR2Q969E8 191 aaKnown RBP14.01□□□□□ -0.17
PBX1-211ENST00000498497 ZNF622Q969S3 477 aaKnown RBP eCLIP14.01□□□□□ -0.17
PBX1-211ENST00000498497 JRKLQ9Y4A0 524 aa14.01□□□□□ -0.17
PBX1-211ENST00000498497 GOLIM4O00461 696 aa14□□□□□ -0.17
PBX1-211ENST00000498497 CASQ1P31415 396 aa14□□□□□ -0.17
PBX1-211ENST00000498497 LARP6Q9BRS8 491 aaKnown RBP14□□□□□ -0.17
PBX1-211ENST00000498497 TEX14Q8IWB6 1497 aa14□□□□□ -0.17
PBX1-211ENST00000498497 ZNF644Q9H582 1327 aaPredicted RBP14□□□□□ -0.17
PBX1-211ENST00000498497 ECM2O94769 699 aaPredicted RBP14□□□□□ -0.17
PBX1-211ENST00000498497 CYP2C19P33261 490 aa14□□□□□ -0.17
PBX1-211ENST00000498497 SPTLC3Q9NUV7 552 aa14□□□□□ -0.17
PBX1-211ENST00000498497 NINLQ9Y2I6 1382 aa14□□□□□ -0.17
PBX1-211ENST00000498497 LMAN1P49257 510 aa13.99□□□□□ -0.17
PBX1-211ENST00000498497 CEP83Q9Y592 693 aa13.99□□□□□ -0.17
PBX1-211ENST00000498497 BLMP54132 1417 aaPredicted RBP13.99□□□□□ -0.17
PBX1-211ENST00000498497 RPRD2Q5VT52 1461 aaKnown RBP13.99□□□□□ -0.17
PBX1-211ENST00000498497 TDO2P48775 406 aa13.99□□□□□ -0.17
PBX1-211ENST00000498497 SMARCE1Q969G3 411 aa13.99□□□□□ -0.17
PBX1-211ENST00000498497 ZBTB12Q9Y330 459 aaPredicted RBP13.99□□□□□ -0.17
PBX1-211ENST00000498497 FIBPO43427 364 aa13.99□□□□□ -0.17
PBX1-211ENST00000498497 PPP2R5AQ15172 486 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms