RNA–Protein interactions for RNA: ENST00000498117.1

TRIM27-207, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-207ENST00000498117 COL14A1Q05707 1796 aaKnown RBP18.88■□□□□ 0.61
TRIM27-207ENST00000498117 MPHOSPH9Q99550 1183 aa18.87■□□□□ 0.61
TRIM27-207ENST00000498117 PRDM11Q9NQV5 511 aa18.87■□□□□ 0.61
TRIM27-207ENST00000498117 PARD3Q8TEW0 1356 aa18.86■□□□□ 0.61
TRIM27-207ENST00000498117 APBA3O96018 575 aa18.86■□□□□ 0.61
TRIM27-207ENST00000498117 ACIN1Q9UKV3 1341 aaKnown RBP18.85■□□□□ 0.61
TRIM27-207ENST00000498117 SPATA31A1Q5TZJ5 1347 aa18.84■□□□□ 0.61
TRIM27-207ENST00000498117 NBPF8Q3BBV2 869 aa18.84■□□□□ 0.61
TRIM27-207ENST00000498117 NBPF14Q5TI25 921 aa18.84■□□□□ 0.61
TRIM27-207ENST00000498117 DCAF8L1A6NGE4 600 aa18.83■□□□□ 0.6
TRIM27-207ENST00000498117 PAK3O75914 559 aaPredicted RBP18.83■□□□□ 0.6
TRIM27-207ENST00000498117 ADGRB2O60241 1585 aa18.83■□□□□ 0.6
TRIM27-207ENST00000498117 THSD7AQ9UPZ6 1657 aa18.82■□□□□ 0.6
TRIM27-207ENST00000498117 EIF3AQ14152 1382 aaKnown RBP18.82■□□□□ 0.6
TRIM27-207ENST00000498117 NGDNQ8NEJ9 315 aaKnown RBP18.82■□□□□ 0.6
TRIM27-207ENST00000498117 TNS1Q9HBL0 1735 aaKnown RBP18.82■□□□□ 0.6
TRIM27-207ENST00000498117 TRPM3Q9HCF6 1732 aaPredicted RBP18.82■□□□□ 0.6
TRIM27-207ENST00000498117 PDE3BQ13370 1112 aa18.81■□□□□ 0.6
TRIM27-207ENST00000498117 HIRIP3Q9BW71 556 aaPredicted RBP18.81■□□□□ 0.6
TRIM27-207ENST00000498117 DLC1Q96QB1 1528 aa18.8■□□□□ 0.6
TRIM27-207ENST00000498117 ALS2Q96Q42 1657 aa18.8■□□□□ 0.6
TRIM27-207ENST00000498117 STRN4Q9NRL3 753 aa18.8■□□□□ 0.6
TRIM27-207ENST00000498117 SPON1Q9HCB6 807 aa18.79■□□□□ 0.6
TRIM27-207ENST00000498117 PPP1R1BQ9UD71 204 aaPredicted RBP18.79■□□□□ 0.6
TRIM27-207ENST00000498117 MINK1Q8N4C8 1332 aaPredicted RBP18.78■□□□□ 0.6
TRIM27-207ENST00000498117 PRR36Q9H6K5 1346 aa18.78■□□□□ 0.6
TRIM27-207ENST00000498117 WASLO00401 505 aaPredicted RBP18.78■□□□□ 0.6
TRIM27-207ENST00000498117 CHRNA2Q15822 529 aa18.78■□□□□ 0.6
TRIM27-207ENST00000498117 TRAK1Q9UPV9 953 aa18.78■□□□□ 0.6
TRIM27-207ENST00000498117 KIAA0232Q92628 1395 aa18.78■□□□□ 0.6
TRIM27-207ENST00000498117 EVA1CP58658 441 aa18.77■□□□□ 0.6
TRIM27-207ENST00000498117 BARGINQ6ZT62 677 aa18.77■□□□□ 0.6
TRIM27-207ENST00000498117 USP35Q9P2H5 1018 aa18.77■□□□□ 0.6
TRIM27-207ENST00000498117 KCNQ2O43526 872 aa18.75■□□□□ 0.59
TRIM27-207ENST00000498117 ZC3H6P61129 1189 aaKnown RBP18.75■□□□□ 0.59
TRIM27-207ENST00000498117 TULP4Q9NRJ4 1543 aa18.74■□□□□ 0.59
TRIM27-207ENST00000498117 NINLQ9Y2I6 1382 aa18.72■□□□□ 0.59
TRIM27-207ENST00000498117 C11orf95C9JLR9 678 aaPredicted RBP18.72■□□□□ 0.59
TRIM27-207ENST00000498117 TCP11L2Q8N4U5 519 aa18.72■□□□□ 0.59
TRIM27-207ENST00000498117 CRYBG1Q9Y4K1 1723 aa18.71■□□□□ 0.59
TRIM27-207ENST00000498117 NUDT16Q96DE0 195 aaKnown RBP18.7■□□□□ 0.58
TRIM27-207ENST00000498117 RREB1Q92766 1687 aa18.69■□□□□ 0.58
TRIM27-207ENST00000498117 SSH2Q76I76 1423 aa18.69■□□□□ 0.58
TRIM27-207ENST00000498117 NUTM2GQ5VZR2 741 aa18.69■□□□□ 0.58
TRIM27-207ENST00000498117 THRAP3Q9Y2W1 955 aaKnown RBP18.69■□□□□ 0.58
TRIM27-207ENST00000498117 ADGRB1O14514 1584 aa18.68■□□□□ 0.58
TRIM27-207ENST00000498117 LARP1Q6PKG0 1096 aaKnown RBP18.68■□□□□ 0.58
TRIM27-207ENST00000498117 NUP188Q5SRE5 1749 aa18.68■□□□□ 0.58
TRIM27-207ENST00000498117 ATP7BP35670 1465 aa18.67■□□□□ 0.58
TRIM27-207ENST00000498117 KDM2AQ9Y2K7 1162 aa18.65■□□□□ 0.58
TRIM27-207ENST00000498117 PLSCR1O15162 318 aa18.64■□□□□ 0.57
TRIM27-207ENST00000498117 ABTB2Q8N961 1025 aa18.64■□□□□ 0.57
TRIM27-207ENST00000498117 STAC3Q96MF2 364 aa18.63■□□□□ 0.57
TRIM27-207ENST00000498117 CPDO75976 1380 aa18.63■□□□□ 0.57
TRIM27-207ENST00000498117 CAMTA1Q9Y6Y1 1673 aa18.63■□□□□ 0.57
TRIM27-207ENST00000498117 DCAF11Q8TEB1 546 aa18.62■□□□□ 0.57
TRIM27-207ENST00000498117 CDK19Q9BWU1 502 aa18.62■□□□□ 0.57
TRIM27-207ENST00000498117 CCDC61Q9Y6R9 512 aa18.62■□□□□ 0.57
TRIM27-207ENST00000498117 ACEP12821 1306 aa18.62■□□□□ 0.57
TRIM27-207ENST00000498117 PHRF1Q9P1Y6 1649 aaKnown RBP18.62■□□□□ 0.57
TRIM27-207ENST00000498117 POLR3AO14802 1390 aaPredicted RBP18.61■□□□□ 0.57
TRIM27-207ENST00000498117 PLEKHG3A1L390 1219 aa18.6■□□□□ 0.57
TRIM27-207ENST00000498117 NLRP13Q86W25 1043 aa18.6■□□□□ 0.57
TRIM27-207ENST00000498117 ITSN1Q15811 1721 aa18.6■□□□□ 0.57
TRIM27-207ENST00000498117 GCP02774 474 aa18.59■□□□□ 0.57
TRIM27-207ENST00000498117 ZNF784Q8NCA9 323 aaPredicted RBP18.59■□□□□ 0.57
TRIM27-207ENST00000498117 OVOS2A0A0G2JMS6 1433 aa18.58■□□□□ 0.57
TRIM27-207ENST00000498117 OVOS2A0A0J9YW53 1432 aa18.58■□□□□ 0.57
TRIM27-207ENST00000498117 OVOS2Q6IE36 1432 aa18.58■□□□□ 0.57
TRIM27-207ENST00000498117 USP19O94966 1318 aa18.57■□□□□ 0.56
TRIM27-207ENST00000498117 BCL11BQ9C0K0 894 aaPredicted RBP18.57■□□□□ 0.56
TRIM27-207ENST00000498117 ANO8Q9HCE9 1232 aaPredicted RBP18.57■□□□□ 0.56
TRIM27-207ENST00000498117 DDB1Q16531 1140 aa18.56■□□□□ 0.56
TRIM27-207ENST00000498117 LMO7Q8WWI1 1683 aa18.55■□□□□ 0.56
TRIM27-207ENST00000498117 COL5A2P05997 1499 aaPredicted RBP18.55■□□□□ 0.56
TRIM27-207ENST00000498117 ZBTB7AO95365 584 aa18.55■□□□□ 0.56
TRIM27-207ENST00000498117 CRB1P82279 1406 aa18.55■□□□□ 0.56
TRIM27-207ENST00000498117 NRKQ7Z2Y5 1582 aa18.55■□□□□ 0.56
TRIM27-207ENST00000498117 PARP4Q9UKK3 1724 aaKnown RBP18.54■□□□□ 0.56
TRIM27-207ENST00000498117 PTGER2P43116 358 aa18.53■□□□□ 0.56
TRIM27-207ENST00000498117 PROM2Q8N271 834 aa18.53■□□□□ 0.56
TRIM27-207ENST00000498117 PDGFDQ9GZP0 370 aaPredicted RBP18.53■□□□□ 0.56
TRIM27-207ENST00000498117 ATF5Q9Y2D1 282 aaPredicted RBP18.53■□□□□ 0.56
TRIM27-207ENST00000498117 RGPD3A6NKT7 1758 aaPredicted RBP18.52■□□□□ 0.55
TRIM27-207ENST00000498117 RGPD4Q7Z3J3 1758 aa18.52■□□□□ 0.55
TRIM27-207ENST00000498117 SENP3-EIF4A1A0A087X0R7 540 aa18.51■□□□□ 0.55
TRIM27-207ENST00000498117 ZBTB7CA1YPR0 619 aa18.51■□□□□ 0.55
TRIM27-207ENST00000498117 TOM1L2Q6ZVM7 507 aa18.51■□□□□ 0.55
TRIM27-207ENST00000498117 SYT17Q9BSW7 474 aa18.51■□□□□ 0.55
TRIM27-207ENST00000498117 STK32BQ9NY57 414 aa18.51■□□□□ 0.55
TRIM27-207ENST00000498117 PTF1AQ7RTS3 328 aa18.5■□□□□ 0.55
TRIM27-207ENST00000498117 CDCA7Q9BWT1 371 aaPredicted RBP18.5■□□□□ 0.55
TRIM27-207ENST00000498117 CASZ1Q86V15 1759 aa18.5■□□□□ 0.55
TRIM27-207ENST00000498117 ARHGEF28Q8N1W1 1705 aaKnown RBP18.49■□□□□ 0.55
TRIM27-207ENST00000498117 PEAK1Q9H792 1746 aa18.49■□□□□ 0.55
TRIM27-207ENST00000498117 FHDC1Q9C0D6 1143 aaPredicted RBP18.49■□□□□ 0.55
TRIM27-207ENST00000498117 BRD4O60885 1362 aaPredicted RBP18.49■□□□□ 0.55
TRIM27-207ENST00000498117 AATKQ6ZMQ8 1374 aa18.49■□□□□ 0.55
TRIM27-207ENST00000498117 C1QTNF8P60827 252 aa18.48■□□□□ 0.55
TRIM27-207ENST00000498117 SLC15A2Q16348 729 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms