RNA–Protein interactions for RNA: ENST00000497448.1

TOM1-217, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-217ENST00000497448 PPP1R1BQ9UD71 204 aaPredicted RBP15.84■□□□□ 0.13
TOM1-217ENST00000497448 ANKRD30BQ9BXX2 1392 aa15.84■□□□□ 0.13
TOM1-217ENST00000497448 FAM196AQ6ZSG2 479 aa15.83■□□□□ 0.12
TOM1-217ENST00000497448 PMFBP1Q8TBY8 1022 aa15.83■□□□□ 0.12
TOM1-217ENST00000497448 NRKQ7Z2Y5 1582 aa15.83■□□□□ 0.12
TOM1-217ENST00000497448 CASZ1Q86V15 1759 aa15.82■□□□□ 0.12
TOM1-217ENST00000497448 SPATA31A1Q5TZJ5 1347 aa15.82■□□□□ 0.12
TOM1-217ENST00000497448 RGPD3A6NKT7 1758 aaPredicted RBP15.81■□□□□ 0.12
TOM1-217ENST00000497448 UTRNP46939 3433 aa15.81■□□□□ 0.12
TOM1-217ENST00000497448 RGPD4Q7Z3J3 1758 aa15.81■□□□□ 0.12
TOM1-217ENST00000497448 SIRT1Q96EB6 747 aa15.81■□□□□ 0.12
TOM1-217ENST00000497448 SPON1Q9HCB6 807 aa15.81■□□□□ 0.12
TOM1-217ENST00000497448 DCAF8L1A6NGE4 600 aa15.8■□□□□ 0.12
TOM1-217ENST00000497448 SLC4A1APQ9BWU0 796 aaKnown RBP15.8■□□□□ 0.12
TOM1-217ENST00000497448 MYOM1P52179 1685 aa15.79■□□□□ 0.12
TOM1-217ENST00000497448 DLC1Q96QB1 1528 aa15.79■□□□□ 0.12
TOM1-217ENST00000497448 KCNQ2O43526 872 aa15.79■□□□□ 0.12
TOM1-217ENST00000497448 NBPF8Q3BBV2 869 aa15.79■□□□□ 0.12
TOM1-217ENST00000497448 RGL3Q3MIN7 710 aa15.79■□□□□ 0.12
TOM1-217ENST00000497448 NBPF14Q5TI25 921 aa15.79■□□□□ 0.12
TOM1-217ENST00000497448 SAFB2Q14151 953 aaKnown RBP eCLIP15.78■□□□□ 0.12
TOM1-217ENST00000497448 PRDM11Q9NQV5 511 aa15.78■□□□□ 0.12
TOM1-217ENST00000497448 TULP4Q9NRJ4 1543 aa15.78■□□□□ 0.12
TOM1-217ENST00000497448 GPRASP1Q5JY77 1395 aa15.77■□□□□ 0.12
TOM1-217ENST00000497448 ACIN1Q9UKV3 1341 aaKnown RBP15.77■□□□□ 0.12
TOM1-217ENST00000497448 ZNF784Q8NCA9 323 aaPredicted RBP15.77■□□□□ 0.12
TOM1-217ENST00000497448 KIAA0232Q92628 1395 aa15.76■□□□□ 0.11
TOM1-217ENST00000497448 SENP3-EIF4A1A0A087X0R7 540 aa15.76■□□□□ 0.11
TOM1-217ENST00000497448 PRAM1Q96QH2 718 aa15.76■□□□□ 0.11
TOM1-217ENST00000497448 PARP4Q9UKK3 1724 aaKnown RBP15.76■□□□□ 0.11
TOM1-217ENST00000497448 CHD4Q14839 1912 aa15.75■□□□□ 0.11
TOM1-217ENST00000497448 STRN4Q9NRL3 753 aa15.75■□□□□ 0.11
TOM1-217ENST00000497448 SSH2Q76I76 1423 aa15.75■□□□□ 0.11
TOM1-217ENST00000497448 DHX57Q6P158 1386 aaKnown RBP15.75■□□□□ 0.11
TOM1-217ENST00000497448 ITSN1Q15811 1721 aa15.74■□□□□ 0.11
TOM1-217ENST00000497448 PEAK1Q9H792 1746 aa15.74■□□□□ 0.11
TOM1-217ENST00000497448 PRR36Q9H6K5 1346 aa15.74■□□□□ 0.11
TOM1-217ENST00000497448 CHRNA2Q15822 529 aa15.74■□□□□ 0.11
TOM1-217ENST00000497448 LMO7Q8WWI1 1683 aa15.73■□□□□ 0.11
TOM1-217ENST00000497448 SBF2Q86WG5 1849 aa15.73■□□□□ 0.11
TOM1-217ENST00000497448 IFFO2Q5TF58 517 aa15.73■□□□□ 0.11
TOM1-217ENST00000497448 C14orf93Q9H972 538 aaKnown RBP15.73■□□□□ 0.11
TOM1-217ENST00000497448 BARGINQ6ZT62 677 aa15.72■□□□□ 0.11
TOM1-217ENST00000497448 USP35Q9P2H5 1018 aa15.72■□□□□ 0.11
TOM1-217ENST00000497448 EIF3AQ14152 1382 aaKnown RBP15.72■□□□□ 0.11
TOM1-217ENST00000497448 ADGRB1O14514 1584 aa15.71■□□□□ 0.11
TOM1-217ENST00000497448 PDE3BQ13370 1112 aa15.71■□□□□ 0.11
TOM1-217ENST00000497448 ANO8Q9HCE9 1232 aaPredicted RBP15.71■□□□□ 0.11
TOM1-217ENST00000497448 ATP7BP35670 1465 aa15.71■□□□□ 0.1
TOM1-217ENST00000497448 LRRC37A3O60309 1634 aa15.7■□□□□ 0.1
TOM1-217ENST00000497448 CFAP70Q5T0N1 1121 aa15.7■□□□□ 0.1
TOM1-217ENST00000497448 PPARGC1BQ86YN6 1023 aaKnown RBP15.7■□□□□ 0.1
TOM1-217ENST00000497448 PAK3O75914 559 aaPredicted RBP15.69■□□□□ 0.1
TOM1-217ENST00000497448 HIRIP3Q9BW71 556 aaPredicted RBP15.69■□□□□ 0.1
TOM1-217ENST00000497448 C1QTNF8P60827 252 aa15.68■□□□□ 0.1
TOM1-217ENST00000497448 POGKQ9P215 609 aa15.68■□□□□ 0.1
TOM1-217ENST00000497448 OVOS2A0A0G2JMS6 1433 aa15.67■□□□□ 0.1
TOM1-217ENST00000497448 OVOS2A0A0J9YW53 1432 aa15.67■□□□□ 0.1
TOM1-217ENST00000497448 OVOS2Q6IE36 1432 aa15.67■□□□□ 0.1
TOM1-217ENST00000497448 TOPAZ1Q8N9V7 1692 aa15.67■□□□□ 0.1
TOM1-217ENST00000497448 WNK3Q9BYP7 1800 aa15.66■□□□□ 0.1
TOM1-217ENST00000497448 ZC3H6P61129 1189 aaKnown RBP15.66■□□□□ 0.1
TOM1-217ENST00000497448 LARP1Q6PKG0 1096 aaKnown RBP15.66■□□□□ 0.1
TOM1-217ENST00000497448 NGDNQ8NEJ9 315 aaKnown RBP15.66■□□□□ 0.1
TOM1-217ENST00000497448 PDGFDQ9GZP0 370 aaPredicted RBP15.66■□□□□ 0.1
TOM1-217ENST00000497448 MINK1Q8N4C8 1332 aaPredicted RBP15.66■□□□□ 0.1
TOM1-217ENST00000497448 PTGER2P43116 358 aa15.65■□□□□ 0.1
TOM1-217ENST00000497448 TCP11L2Q8N4U5 519 aa15.65■□□□□ 0.1
TOM1-217ENST00000497448 ZBTB7AO95365 584 aa15.64■□□□□ 0.09
TOM1-217ENST00000497448 ARHGEF28Q8N1W1 1705 aaKnown RBP15.63■□□□□ 0.09
TOM1-217ENST00000497448 EVA1CP58658 441 aa15.63■□□□□ 0.09
TOM1-217ENST00000497448 COL5A2P05997 1499 aaPredicted RBP15.63■□□□□ 0.09
TOM1-217ENST00000497448 AKAP12Q02952 1782 aa15.62■□□□□ 0.09
TOM1-217ENST00000497448 WASLO00401 505 aaPredicted RBP15.62■□□□□ 0.09
TOM1-217ENST00000497448 PLSCR1O15162 318 aa15.62■□□□□ 0.09
TOM1-217ENST00000497448 CEP350Q5VT06 3117 aa15.62■□□□□ 0.09
TOM1-217ENST00000497448 CPDO75976 1380 aa15.62■□□□□ 0.09
TOM1-217ENST00000497448 NUTM2GQ5VZR2 741 aa15.61■□□□□ 0.09
TOM1-217ENST00000497448 FHDC1Q9C0D6 1143 aaPredicted RBP15.61■□□□□ 0.09
TOM1-217ENST00000497448 TRAK1Q9UPV9 953 aa15.61■□□□□ 0.09
TOM1-217ENST00000497448 THRAP3Q9Y2W1 955 aaKnown RBP15.61■□□□□ 0.09
TOM1-217ENST00000497448 C11orf95C9JLR9 678 aaPredicted RBP15.6■□□□□ 0.09
TOM1-217ENST00000497448 SYT17Q9BSW7 474 aa15.6■□□□□ 0.09
TOM1-217ENST00000497448 ATF5Q9Y2D1 282 aaPredicted RBP15.59■□□□□ 0.09
TOM1-217ENST00000497448 CRB1P82279 1406 aa15.59■□□□□ 0.09
TOM1-217ENST00000497448 PTF1AQ7RTS3 328 aa15.58■□□□□ 0.08
TOM1-217ENST00000497448 MPHOSPH9Q99550 1183 aa15.58■□□□□ 0.08
TOM1-217ENST00000497448 BCL11BQ9C0K0 894 aaPredicted RBP15.58■□□□□ 0.08
TOM1-217ENST00000497448 USP19O94966 1318 aa15.58■□□□□ 0.08
TOM1-217ENST00000497448 PROM2Q8N271 834 aa15.57■□□□□ 0.08
TOM1-217ENST00000497448 POLR3AO14802 1390 aaPredicted RBP15.57■□□□□ 0.08
TOM1-217ENST00000497448 SGIP1Q9BQI5 828 aa15.56■□□□□ 0.08
TOM1-217ENST00000497448 SHANK3Q9BYB0 1731 aa15.56■□□□□ 0.08
TOM1-217ENST00000497448 PAPPAQ13219 1627 aa15.55■□□□□ 0.08
TOM1-217ENST00000497448 NUDT16Q96DE0 195 aaKnown RBP15.55■□□□□ 0.08
TOM1-217ENST00000497448 BCL9O00512 1426 aa15.54■□□□□ 0.08
TOM1-217ENST00000497448 GOLGB1Q14789 3259 aaKnown RBP15.54■□□□□ 0.08
TOM1-217ENST00000497448 MAP3K5Q99683 1374 aa15.54■□□□□ 0.08
TOM1-217ENST00000497448 GIGYF1O75420 1035 aaPredicted RBP15.54■□□□□ 0.08
TOM1-217ENST00000497448 MTFR1LQ9H019 292 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms