RNA–Protein interactions for RNA: ENST00000496216.5

STX1A-213, Transcript of syntaxin 1A, humanhuman

TSL 5

Gene STX1A, Length 714 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-213ENST00000496216 IFT172Q9UG01 1749 aa22.19■■□□□ 1.14
STX1A-213ENST00000496216 COL14A1Q05707 1796 aaKnown RBP22.19■■□□□ 1.14
STX1A-213ENST00000496216 ABCA3Q99758 1704 aa22.18■■□□□ 1.14
STX1A-213ENST00000496216 TRIM37O94972 964 aa22.18■■□□□ 1.14
STX1A-213ENST00000496216 APBA3O96018 575 aa22.18■■□□□ 1.14
STX1A-213ENST00000496216 NBPF8Q3BBV2 869 aa22.18■■□□□ 1.14
STX1A-213ENST00000496216 NBPF14Q5TI25 921 aa22.18■■□□□ 1.14
STX1A-213ENST00000496216 NRAPQ86VF7 1730 aa22.17■■□□□ 1.14
STX1A-213ENST00000496216 SPATA31A1Q5TZJ5 1347 aa22.17■■□□□ 1.14
STX1A-213ENST00000496216 DCAF8L1A6NGE4 600 aa22.17■■□□□ 1.14
STX1A-213ENST00000496216 NGDNQ8NEJ9 315 aaKnown RBP22.17■■□□□ 1.14
STX1A-213ENST00000496216 DLC1Q96QB1 1528 aa22.16■■□□□ 1.14
STX1A-213ENST00000496216 PAK3O75914 559 aaPredicted RBP22.16■■□□□ 1.14
STX1A-213ENST00000496216 ADGRB2O60241 1585 aa22.15■■□□□ 1.14
STX1A-213ENST00000496216 RGPD8O14715 1765 aaPredicted RBP22.15■■□□□ 1.14
STX1A-213ENST00000496216 PDE3BQ13370 1112 aa22.14■■□□□ 1.13
STX1A-213ENST00000496216 WASLO00401 505 aaPredicted RBP22.13■■□□□ 1.13
STX1A-213ENST00000496216 THSD7AQ9UPZ6 1657 aa22.12■■□□□ 1.13
STX1A-213ENST00000496216 BARGINQ6ZT62 677 aa22.12■■□□□ 1.13
STX1A-213ENST00000496216 HIRIP3Q9BW71 556 aaPredicted RBP22.12■■□□□ 1.13
STX1A-213ENST00000496216 TRAK1Q9UPV9 953 aa22.11■■□□□ 1.13
STX1A-213ENST00000496216 MINK1Q8N4C8 1332 aaPredicted RBP22.1■■□□□ 1.13
STX1A-213ENST00000496216 PRR36Q9H6K5 1346 aa22.1■■□□□ 1.13
STX1A-213ENST00000496216 C11orf95C9JLR9 678 aaPredicted RBP22.1■■□□□ 1.13
STX1A-213ENST00000496216 EVA1CP58658 441 aa22.1■■□□□ 1.13
STX1A-213ENST00000496216 STRN4Q9NRL3 753 aa22.1■■□□□ 1.13
STX1A-213ENST00000496216 TRPM3Q9HCF6 1732 aaPredicted RBP22.09■■□□□ 1.13
STX1A-213ENST00000496216 SPON1Q9HCB6 807 aa22.09■■□□□ 1.13
STX1A-213ENST00000496216 PPP1R1BQ9UD71 204 aaPredicted RBP22.09■■□□□ 1.13
STX1A-213ENST00000496216 KIAA0232Q92628 1395 aa22.09■■□□□ 1.13
STX1A-213ENST00000496216 ALS2Q96Q42 1657 aa22.08■■□□□ 1.13
STX1A-213ENST00000496216 TULP4Q9NRJ4 1543 aa22.07■■□□□ 1.12
STX1A-213ENST00000496216 CHRNA2Q15822 529 aa22.07■■□□□ 1.12
STX1A-213ENST00000496216 TNS1Q9HBL0 1735 aaKnown RBP22.06■■□□□ 1.12
STX1A-213ENST00000496216 KCNQ2O43526 872 aa22.06■■□□□ 1.12
STX1A-213ENST00000496216 STAC3Q96MF2 364 aa22.06■■□□□ 1.12
STX1A-213ENST00000496216 ZC3H6P61129 1189 aaKnown RBP22.05■■□□□ 1.12
STX1A-213ENST00000496216 USP35Q9P2H5 1018 aa22.05■■□□□ 1.12
STX1A-213ENST00000496216 THRAP3Q9Y2W1 955 aaKnown RBP22.04■■□□□ 1.12
STX1A-213ENST00000496216 TCP11L2Q8N4U5 519 aa22.03■■□□□ 1.12
STX1A-213ENST00000496216 NINLQ9Y2I6 1382 aa22.02■■□□□ 1.12
STX1A-213ENST00000496216 NUDT16Q96DE0 195 aaKnown RBP22.02■■□□□ 1.12
STX1A-213ENST00000496216 ADGRB1O14514 1584 aa22.01■■□□□ 1.11
STX1A-213ENST00000496216 ATP7BP35670 1465 aa22.01■■□□□ 1.11
STX1A-213ENST00000496216 SSH2Q76I76 1423 aa21.99■■□□□ 1.11
STX1A-213ENST00000496216 LARP1Q6PKG0 1096 aaKnown RBP21.98■■□□□ 1.11
STX1A-213ENST00000496216 NUTM2GQ5VZR2 741 aa21.96■■□□□ 1.11
STX1A-213ENST00000496216 CRYBG1Q9Y4K1 1723 aa21.96■■□□□ 1.11
STX1A-213ENST00000496216 CPDO75976 1380 aa21.96■■□□□ 1.11
STX1A-213ENST00000496216 PLSCR1O15162 318 aa21.95■■□□□ 1.1
STX1A-213ENST00000496216 ABTB2Q8N961 1025 aa21.95■■□□□ 1.1
STX1A-213ENST00000496216 DCAF11Q8TEB1 546 aa21.95■■□□□ 1.1
STX1A-213ENST00000496216 KDM2AQ9Y2K7 1162 aa21.95■■□□□ 1.1
STX1A-213ENST00000496216 CCDC61Q9Y6R9 512 aa21.95■■□□□ 1.1
STX1A-213ENST00000496216 POLR3AO14802 1390 aaPredicted RBP21.94■■□□□ 1.1
STX1A-213ENST00000496216 PLEKHG3A1L390 1219 aa21.93■■□□□ 1.1
STX1A-213ENST00000496216 ACEP12821 1306 aa21.93■■□□□ 1.1
STX1A-213ENST00000496216 NLRP13Q86W25 1043 aa21.93■■□□□ 1.1
STX1A-213ENST00000496216 RREB1Q92766 1687 aa21.93■■□□□ 1.1
STX1A-213ENST00000496216 CDK19Q9BWU1 502 aa21.93■■□□□ 1.1
STX1A-213ENST00000496216 CAMTA1Q9Y6Y1 1673 aa21.9■■□□□ 1.1
STX1A-213ENST00000496216 NUP188Q5SRE5 1749 aa21.89■■□□□ 1.1
STX1A-213ENST00000496216 GCP02774 474 aa21.89■■□□□ 1.09
STX1A-213ENST00000496216 OVOS2A0A0G2JMS6 1433 aa21.89■■□□□ 1.09
STX1A-213ENST00000496216 OVOS2A0A0J9YW53 1432 aa21.89■■□□□ 1.09
STX1A-213ENST00000496216 OVOS2Q6IE36 1432 aa21.89■■□□□ 1.09
STX1A-213ENST00000496216 USP19O94966 1318 aa21.88■■□□□ 1.09
STX1A-213ENST00000496216 BCL11BQ9C0K0 894 aaPredicted RBP21.88■■□□□ 1.09
STX1A-213ENST00000496216 PHRF1Q9P1Y6 1649 aaKnown RBP21.88■■□□□ 1.09
STX1A-213ENST00000496216 ITSN1Q15811 1721 aa21.86■■□□□ 1.09
STX1A-213ENST00000496216 DDB1Q16531 1140 aa21.86■■□□□ 1.09
STX1A-213ENST00000496216 CRB1P82279 1406 aa21.86■■□□□ 1.09
STX1A-213ENST00000496216 BRD4O60885 1362 aaPredicted RBP21.85■■□□□ 1.09
STX1A-213ENST00000496216 CDCA7Q9BWT1 371 aaPredicted RBP21.83■■□□□ 1.09
STX1A-213ENST00000496216 ZNF784Q8NCA9 323 aaPredicted RBP21.82■■□□□ 1.08
STX1A-213ENST00000496216 COL5A2P05997 1499 aaPredicted RBP21.82■■□□□ 1.08
STX1A-213ENST00000496216 NRKQ7Z2Y5 1582 aa21.82■■□□□ 1.08
STX1A-213ENST00000496216 LMO7Q8WWI1 1683 aa21.81■■□□□ 1.08
STX1A-213ENST00000496216 AATKQ6ZMQ8 1374 aa21.8■■□□□ 1.08
STX1A-213ENST00000496216 TOM1L2Q6ZVM7 507 aa21.8■■□□□ 1.08
STX1A-213ENST00000496216 ANO8Q9HCE9 1232 aaPredicted RBP21.8■■□□□ 1.08
STX1A-213ENST00000496216 ZBTB7AO95365 584 aa21.79■■□□□ 1.08
STX1A-213ENST00000496216 STK32BQ9NY57 414 aa21.79■■□□□ 1.08
STX1A-213ENST00000496216 PARP4Q9UKK3 1724 aaKnown RBP21.79■■□□□ 1.08
STX1A-213ENST00000496216 BCL9O00512 1426 aa21.78■■□□□ 1.08
STX1A-213ENST00000496216 PTGER2P43116 358 aa21.77■■□□□ 1.08
STX1A-213ENST00000496216 NLRP6P59044 892 aa21.77■■□□□ 1.08
STX1A-213ENST00000496216 SRPK2P78362 688 aaKnown RBP21.77■■□□□ 1.08
STX1A-213ENST00000496216 PROM2Q8N271 834 aa21.77■■□□□ 1.08
STX1A-213ENST00000496216 ZBTB7CA1YPR0 619 aa21.76■■□□□ 1.07
STX1A-213ENST00000496216 SYT17Q9BSW7 474 aa21.76■■□□□ 1.07
STX1A-213ENST00000496216 RGPD3A6NKT7 1758 aaPredicted RBP21.76■■□□□ 1.07
STX1A-213ENST00000496216 RGPD4Q7Z3J3 1758 aa21.76■■□□□ 1.07
STX1A-213ENST00000496216 RAB3GAP2Q9H2M9 1393 aa21.75■■□□□ 1.07
STX1A-213ENST00000496216 SLC15A2Q16348 729 aa21.75■■□□□ 1.07
STX1A-213ENST00000496216 ATF5Q9Y2D1 282 aaPredicted RBP21.75■■□□□ 1.07
STX1A-213ENST00000496216 TXNRD1Q16881 649 aa21.74■■□□□ 1.07
STX1A-213ENST00000496216 MARCH10Q8NA82 808 aaPredicted RBP21.74■■□□□ 1.07
STX1A-213ENST00000496216 PDGFDQ9GZP0 370 aaPredicted RBP21.74■■□□□ 1.07
STX1A-213ENST00000496216 MTFR1LQ9H019 292 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms