RNA–Protein interactions for RNA: ENST00000491789.1

VPS45-209, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 976 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-209ENST00000491789 ECM2O94769 699 aaPredicted RBP10.22□□□□□ -0.77
VPS45-209ENST00000491789 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.22□□□□□ -0.77
VPS45-209ENST00000491789 L3MBTL3Q96JM7 780 aaPredicted RBP10.22□□□□□ -0.77
VPS45-209ENST00000491789 STAC3Q96MF2 364 aa10.22□□□□□ -0.77
VPS45-209ENST00000491789 SLAIN2Q9P270 581 aa10.22□□□□□ -0.77
VPS45-209ENST00000491789 LAMC1P11047 1609 aa10.22□□□□□ -0.77
VPS45-209ENST00000491789 NRXN3Q9Y4C0 1643 aa10.22□□□□□ -0.77
VPS45-209ENST00000491789 PHLPP1O60346 1717 aa10.21□□□□□ -0.77
VPS45-209ENST00000491789 CCER2I3L3R5 266 aa10.21□□□□□ -0.77
VPS45-209ENST00000491789 VGFO15240 615 aaPredicted RBP10.21□□□□□ -0.77
VPS45-209ENST00000491789 HSPA5P11021 654 aaKnown RBP10.21□□□□□ -0.77
VPS45-209ENST00000491789 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.21□□□□□ -0.77
VPS45-209ENST00000491789 MSH6P52701 1360 aa10.21□□□□□ -0.78
VPS45-209ENST00000491789 SPATA31E1Q6ZUB1 1445 aa10.21□□□□□ -0.78
VPS45-209ENST00000491789 PTPRUQ92729 1446 aa10.21□□□□□ -0.78
VPS45-209ENST00000491789 ANP32CO43423 234 aa10.2□□□□□ -0.78
VPS45-209ENST00000491789 C3orf67Q6ZVT6 689 aa10.2□□□□□ -0.78
VPS45-209ENST00000491789 KIF1BO60333 1816 aa10.19□□□□□ -0.78
VPS45-209ENST00000491789 SNPHO15079 494 aa10.19□□□□□ -0.78
VPS45-209ENST00000491789 POTEAQ6S8J7 498 aa10.19□□□□□ -0.78
VPS45-209ENST00000491789 AMOTL2Q9Y2J4 779 aa10.19□□□□□ -0.78
VPS45-209ENST00000491789 DIP2AQ14689 1571 aa10.18□□□□□ -0.78
VPS45-209ENST00000491789 NCOA3Q9Y6Q9 1424 aa10.18□□□□□ -0.78
VPS45-209ENST00000491789 ROCK2O75116 1388 aaKnown RBP10.18□□□□□ -0.78
VPS45-209ENST00000491789 USP47Q96K76 1375 aa10.18□□□□□ -0.78
VPS45-209ENST00000491789 PIK3R4Q99570 1358 aa10.18□□□□□ -0.78
VPS45-209ENST00000491789 DDX10Q13206 875 aaKnown RBP10.18□□□□□ -0.78
VPS45-209ENST00000491789 NBPF8Q3BBV2 869 aa10.18□□□□□ -0.78
VPS45-209ENST00000491789 PDCD7Q8N8D1 485 aaKnown RBP10.18□□□□□ -0.78
VPS45-209ENST00000491789 CLTCL1P53675 1640 aa10.18□□□□□ -0.78
VPS45-209ENST00000491789 COL16A1Q07092 1604 aaPredicted RBP10.18□□□□□ -0.78
VPS45-209ENST00000491789 PRAG1Q86YV5 1406 aa10.17□□□□□ -0.78
VPS45-209ENST00000491789 GPRASP1Q5JY77 1395 aa10.17□□□□□ -0.78
VPS45-209ENST00000491789 CCDC7Q96M83 1385 aa10.17□□□□□ -0.78
VPS45-209ENST00000491789 RNF25Q96BH1 459 aaPredicted RBP10.17□□□□□ -0.78
VPS45-209ENST00000491789 C19orf44Q9H6X5 657 aa10.17□□□□□ -0.78
VPS45-209ENST00000491789 XRN1Q8IZH2 1706 aaKnown RBP10.16□□□□□ -0.78
VPS45-209ENST00000491789 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.16□□□□□ -0.78
VPS45-209ENST00000491789 ZFP91Q96JP5 570 aaPredicted RBP10.16□□□□□ -0.78
VPS45-209ENST00000491789 SETBP1Q9Y6X0 1596 aa10.16□□□□□ -0.78
VPS45-209ENST00000491789 TRPM1Q7Z4N2 1603 aa10.15□□□□□ -0.78
VPS45-209ENST00000491789 ZNF326Q5BKZ1 582 aaKnown RBP10.15□□□□□ -0.78
VPS45-209ENST00000491789 NEXMIFQ5QGS0 1516 aa10.15□□□□□ -0.78
VPS45-209ENST00000491789 METP08581 1390 aa10.14□□□□□ -0.79
VPS45-209ENST00000491789 WASHC2AQ641Q2 1341 aa10.14□□□□□ -0.79
VPS45-209ENST00000491789 SETD1AO15047 1707 aaKnown RBP10.14□□□□□ -0.79
VPS45-209ENST00000491789 C14orf37Q86TY3 774 aa10.14□□□□□ -0.79
VPS45-209ENST00000491789 CADPS2Q86UW7 1296 aa10.14□□□□□ -0.79
VPS45-209ENST00000491789 EFCAB3Q8N7B9 438 aa10.14□□□□□ -0.79
VPS45-209ENST00000491789 JCADQ9P266 1359 aa10.14□□□□□ -0.79
VPS45-209ENST00000491789 AHDC1Q5TGY3 1603 aaPredicted RBP10.13□□□□□ -0.79
VPS45-209ENST00000491789 SHPRHQ149N8 1683 aa10.12□□□□□ -0.79
VPS45-209ENST00000491789 LRP6O75581 1613 aa10.12□□□□□ -0.79
VPS45-209ENST00000491789 ATF3P18847 181 aa10.12□□□□□ -0.79
VPS45-209ENST00000491789 BRINP3Q76B58 766 aa10.12□□□□□ -0.79
VPS45-209ENST00000491789 NALCNQ8IZF0 1738 aa10.12□□□□□ -0.79
VPS45-209ENST00000491789 PPLO60437 1756 aa10.11□□□□□ -0.79
VPS45-209ENST00000491789 MYOM2P54296 1465 aa10.11□□□□□ -0.79
VPS45-209ENST00000491789 DCAF11Q8TEB1 546 aa10.11□□□□□ -0.79
VPS45-209ENST00000491789 MARVELD3Q96A59 401 aa10.11□□□□□ -0.79
VPS45-209ENST00000491789 YTHDC1Q96MU7 727 aaKnown RBP10.11□□□□□ -0.79
VPS45-209ENST00000491789 CARD11Q9BXL7 1154 aa10.11□□□□□ -0.79
VPS45-209ENST00000491789 NHSL1Q5SYE7 1610 aa10.11□□□□□ -0.79
VPS45-209ENST00000491789 KIF7Q2M1P5 1343 aa10.1□□□□□ -0.79
VPS45-209ENST00000491789 STK25O00506 426 aa10.1□□□□□ -0.79
VPS45-209ENST00000491789 HIRIP3Q9BW71 556 aaPredicted RBP10.1□□□□□ -0.79
VPS45-209ENST00000491789 BCL11BQ9C0K0 894 aaPredicted RBP10.1□□□□□ -0.79
VPS45-209ENST00000491789 STK24Q9Y6E0 443 aa10.1□□□□□ -0.79
VPS45-209ENST00000491789 KIAA1210Q9ULL0 1709 aa10.1□□□□□ -0.79
VPS45-209ENST00000491789 MST1RQ04912 1400 aa10.09□□□□□ -0.79
VPS45-209ENST00000491789 SOX12O15370 315 aa10.09□□□□□ -0.79
VPS45-209ENST00000491789 DDX17Q92841 729 aaKnown RBP10.09□□□□□ -0.79
VPS45-209ENST00000491789 BOLA1Q9Y3E2 137 aa10.09□□□□□ -0.79
VPS45-209ENST00000491789 KTN1Q86UP2 1357 aaKnown RBP10.09□□□□□ -0.79
VPS45-209ENST00000491789 SPATA31A6Q5VVP1 1343 aa10.08□□□□□ -0.8
VPS45-209ENST00000491789 DCCP43146 1447 aa10.08□□□□□ -0.8
VPS45-209ENST00000491789 SLC24A1O60721 1099 aa10.08□□□□□ -0.8
VPS45-209ENST00000491789 ASXL1Q8IXJ9 1541 aa10.07□□□□□ -0.8
VPS45-209ENST00000491789 EIF3AQ14152 1382 aaKnown RBP10.07□□□□□ -0.8
VPS45-209ENST00000491789 DPY19L2Q6NUT2 758 aa10.07□□□□□ -0.8
VPS45-209ENST00000491789 KDM2AQ9Y2K7 1162 aa10.06□□□□□ -0.8
VPS45-209ENST00000491789 IFT172Q9UG01 1749 aa10.06□□□□□ -0.8
VPS45-209ENST00000491789 ADGRL3Q9HAR2 1447 aa10.06□□□□□ -0.8
VPS45-209ENST00000491789 RPGRIP1LQ68CZ1 1315 aa10.06□□□□□ -0.8
VPS45-209ENST00000491789 ROBO2Q9HCK4 1378 aa10.05□□□□□ -0.8
VPS45-209ENST00000491789 NUTM2BA6NNL0 878 aaPredicted RBP10.05□□□□□ -0.8
VPS45-209ENST00000491789 NUTM2EB1AL46 878 aaPredicted RBP10.05□□□□□ -0.8
VPS45-209ENST00000491789 RGL2O15211 777 aa10.05□□□□□ -0.8
VPS45-209ENST00000491789 NUTM2AQ8IVF1 878 aaPredicted RBP10.05□□□□□ -0.8
VPS45-209ENST00000491789 ORAI2Q96SN7 254 aa10.04□□□□□ -0.8
VPS45-209ENST00000491789 ADGRF5Q8IZF2 1346 aa10.04□□□□□ -0.8
VPS45-209ENST00000491789 C1orf167Q5SNV9 1468 aa10.04□□□□□ -0.8
VPS45-209ENST00000491789 NRXN1Q9ULB1 1477 aa10.04□□□□□ -0.8
VPS45-209ENST00000491789 EMP3P54852 163 aa10.03□□□□□ -0.8
VPS45-209ENST00000491789 RGL3Q3MIN7 710 aa10.03□□□□□ -0.8
VPS45-209ENST00000491789 CDCA8Q53HL2 280 aa10.03□□□□□ -0.8
VPS45-209ENST00000491789 MEX3CQ5U5Q3 659 aaKnown RBP10.03□□□□□ -0.8
VPS45-209ENST00000491789 ZNF772Q68DY9 489 aaPredicted RBP10.03□□□□□ -0.8
VPS45-209ENST00000491789 LRRC59Q96AG4 307 aaKnown RBP10.03□□□□□ -0.8
VPS45-209ENST00000491789 PTCH1Q13635 1447 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms