RNA–Protein interactions for RNA: ENST00000491390.1

NCSTN-214, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-214ENST00000491390 SPON1Q9HCB6 807 aa16.61■□□□□ 0.25
NCSTN-214ENST00000491390 KCNQ2O43526 872 aa16.6■□□□□ 0.25
NCSTN-214ENST00000491390 APBA3O96018 575 aa16.59■□□□□ 0.25
NCSTN-214ENST00000491390 SIRT1Q96EB6 747 aa16.59■□□□□ 0.25
NCSTN-214ENST00000491390 YTHDC2Q9H6S0 1430 aaKnown RBP16.59■□□□□ 0.25
NCSTN-214ENST00000491390 PLEKHG5O94827 1062 aa16.58■□□□□ 0.24
NCSTN-214ENST00000491390 SPATA31A1Q5TZJ5 1347 aa16.58■□□□□ 0.24
NCSTN-214ENST00000491390 PIK3C2GO75747 1445 aa16.57■□□□□ 0.24
NCSTN-214ENST00000491390 SPATA31E1Q6ZUB1 1445 aa16.57■□□□□ 0.24
NCSTN-214ENST00000491390 DCAF8L1A6NGE4 600 aa16.57■□□□□ 0.24
NCSTN-214ENST00000491390 MPHOSPH9Q99550 1183 aa16.57■□□□□ 0.24
NCSTN-214ENST00000491390 PPP1R1BQ9UD71 204 aaPredicted RBP16.57■□□□□ 0.24
NCSTN-214ENST00000491390 ANKARQ7Z5J8 1434 aa16.56■□□□□ 0.24
NCSTN-214ENST00000491390 SENP3-EIF4A1A0A087X0R7 540 aa16.56■□□□□ 0.24
NCSTN-214ENST00000491390 NBPF8Q3BBV2 869 aa16.56■□□□□ 0.24
NCSTN-214ENST00000491390 NBPF14Q5TI25 921 aa16.56■□□□□ 0.24
NCSTN-214ENST00000491390 LMOD2Q6P5Q4 547 aa16.56■□□□□ 0.24
NCSTN-214ENST00000491390 CASZ1Q86V15 1759 aa16.56■□□□□ 0.24
NCSTN-214ENST00000491390 C1QTNF8P60827 252 aa16.54■□□□□ 0.24
NCSTN-214ENST00000491390 NRKQ7Z2Y5 1582 aa16.54■□□□□ 0.24
NCSTN-214ENST00000491390 RGPD3A6NKT7 1758 aaPredicted RBP16.53■□□□□ 0.24
NCSTN-214ENST00000491390 RGPD4Q7Z3J3 1758 aa16.53■□□□□ 0.24
NCSTN-214ENST00000491390 ANKRD30BQ9BXX2 1392 aa16.52■□□□□ 0.24
NCSTN-214ENST00000491390 SAFB2Q14151 953 aaKnown RBP eCLIP16.52■□□□□ 0.24
NCSTN-214ENST00000491390 BARGINQ6ZT62 677 aa16.5■□□□□ 0.23
NCSTN-214ENST00000491390 MYOM1P52179 1685 aa16.5■□□□□ 0.23
NCSTN-214ENST00000491390 CFAP70Q5T0N1 1121 aa16.49■□□□□ 0.23
NCSTN-214ENST00000491390 PMFBP1Q8TBY8 1022 aa16.49■□□□□ 0.23
NCSTN-214ENST00000491390 ACIN1Q9UKV3 1341 aaKnown RBP16.48■□□□□ 0.23
NCSTN-214ENST00000491390 PRDM11Q9NQV5 511 aa16.48■□□□□ 0.23
NCSTN-214ENST00000491390 KIAA0232Q92628 1395 aa16.48■□□□□ 0.23
NCSTN-214ENST00000491390 PTGER2P43116 358 aa16.47■□□□□ 0.23
NCSTN-214ENST00000491390 PEAK1Q9H792 1746 aa16.47■□□□□ 0.23
NCSTN-214ENST00000491390 DLC1Q96QB1 1528 aa16.46■□□□□ 0.23
NCSTN-214ENST00000491390 PHRF1Q9P1Y6 1649 aaKnown RBP16.46■□□□□ 0.23
NCSTN-214ENST00000491390 C14orf93Q9H972 538 aaKnown RBP16.46■□□□□ 0.23
NCSTN-214ENST00000491390 ANO8Q9HCE9 1232 aaPredicted RBP16.46■□□□□ 0.23
NCSTN-214ENST00000491390 GPRASP1Q5JY77 1395 aa16.46■□□□□ 0.23
NCSTN-214ENST00000491390 SSH2Q76I76 1423 aa16.45■□□□□ 0.22
NCSTN-214ENST00000491390 PRAM1Q96QH2 718 aa16.45■□□□□ 0.22
NCSTN-214ENST00000491390 PRR36Q9H6K5 1346 aa16.45■□□□□ 0.22
NCSTN-214ENST00000491390 GOLGB1Q14789 3259 aaKnown RBP16.44■□□□□ 0.22
NCSTN-214ENST00000491390 PDE3BQ13370 1112 aa16.44■□□□□ 0.22
NCSTN-214ENST00000491390 PDGFDQ9GZP0 370 aaPredicted RBP16.44■□□□□ 0.22
NCSTN-214ENST00000491390 PARP4Q9UKK3 1724 aaKnown RBP16.44■□□□□ 0.22
NCSTN-214ENST00000491390 CHD4Q14839 1912 aa16.43■□□□□ 0.22
NCSTN-214ENST00000491390 TULP4Q9NRJ4 1543 aa16.43■□□□□ 0.22
NCSTN-214ENST00000491390 LMO7Q8WWI1 1683 aa16.43■□□□□ 0.22
NCSTN-214ENST00000491390 DHX57Q6P158 1386 aaKnown RBP16.42■□□□□ 0.22
NCSTN-214ENST00000491390 PLSCR1O15162 318 aa16.42■□□□□ 0.22
NCSTN-214ENST00000491390 CHRNA2Q15822 529 aa16.41■□□□□ 0.22
NCSTN-214ENST00000491390 HIRIP3Q9BW71 556 aaPredicted RBP16.41■□□□□ 0.22
NCSTN-214ENST00000491390 STRN4Q9NRL3 753 aa16.41■□□□□ 0.22
NCSTN-214ENST00000491390 SYT17Q9BSW7 474 aa16.4■□□□□ 0.22
NCSTN-214ENST00000491390 POGKQ9P215 609 aa16.4■□□□□ 0.22
NCSTN-214ENST00000491390 C11orf95C9JLR9 678 aaPredicted RBP16.39■□□□□ 0.21
NCSTN-214ENST00000491390 SGIP1Q9BQI5 828 aa16.39■□□□□ 0.21
NCSTN-214ENST00000491390 EIF3AQ14152 1382 aaKnown RBP16.38■□□□□ 0.21
NCSTN-214ENST00000491390 OVOS2A0A0G2JMS6 1433 aa16.38■□□□□ 0.21
NCSTN-214ENST00000491390 OVOS2A0A0J9YW53 1432 aa16.38■□□□□ 0.21
NCSTN-214ENST00000491390 OVOS2Q6IE36 1432 aa16.38■□□□□ 0.21
NCSTN-214ENST00000491390 ATP7BP35670 1465 aa16.38■□□□□ 0.21
NCSTN-214ENST00000491390 ZBTB7AO95365 584 aa16.38■□□□□ 0.21
NCSTN-214ENST00000491390 TCP11L2Q8N4U5 519 aa16.38■□□□□ 0.21
NCSTN-214ENST00000491390 FHDC1Q9C0D6 1143 aaPredicted RBP16.38■□□□□ 0.21
NCSTN-214ENST00000491390 USP35Q9P2H5 1018 aa16.38■□□□□ 0.21
NCSTN-214ENST00000491390 TRAK1Q9UPV9 953 aa16.38■□□□□ 0.21
NCSTN-214ENST00000491390 KDM2AQ9Y2K7 1162 aa16.38■□□□□ 0.21
NCSTN-214ENST00000491390 ADGRB1O14514 1584 aa16.38■□□□□ 0.21
NCSTN-214ENST00000491390 SBF2Q86WG5 1849 aa16.38■□□□□ 0.21
NCSTN-214ENST00000491390 MAP3K5Q99683 1374 aa16.38■□□□□ 0.21
NCSTN-214ENST00000491390 LARP1Q6PKG0 1096 aaKnown RBP16.37■□□□□ 0.21
NCSTN-214ENST00000491390 PROM2Q8N271 834 aa16.37■□□□□ 0.21
NCSTN-214ENST00000491390 THRAP3Q9Y2W1 955 aaKnown RBP16.37■□□□□ 0.21
NCSTN-214ENST00000491390 MINK1Q8N4C8 1332 aaPredicted RBP16.37■□□□□ 0.21
NCSTN-214ENST00000491390 CPDO75976 1380 aa16.37■□□□□ 0.21
NCSTN-214ENST00000491390 RAB3GAP2Q9H2M9 1393 aa16.37■□□□□ 0.21
NCSTN-214ENST00000491390 LRRC37A3O60309 1634 aa16.35■□□□□ 0.21
NCSTN-214ENST00000491390 ZC3H6P61129 1189 aaKnown RBP16.34■□□□□ 0.21
NCSTN-214ENST00000491390 BCL9O00512 1426 aa16.34■□□□□ 0.21
NCSTN-214ENST00000491390 PTF1AQ7RTS3 328 aa16.33■□□□□ 0.2
NCSTN-214ENST00000491390 COL5A2P05997 1499 aaPredicted RBP16.33■□□□□ 0.2
NCSTN-214ENST00000491390 GIGYF1O75420 1035 aaPredicted RBP16.32■□□□□ 0.2
NCSTN-214ENST00000491390 PAK3O75914 559 aaPredicted RBP16.32■□□□□ 0.2
NCSTN-214ENST00000491390 DCAF11Q8TEB1 546 aa16.32■□□□□ 0.2
NCSTN-214ENST00000491390 SHANK3Q9BYB0 1731 aa16.32■□□□□ 0.2
NCSTN-214ENST00000491390 BCL11BQ9C0K0 894 aaPredicted RBP16.32■□□□□ 0.2
NCSTN-214ENST00000491390 ATF5Q9Y2D1 282 aaPredicted RBP16.32■□□□□ 0.2
NCSTN-214ENST00000491390 AATKQ6ZMQ8 1374 aa16.31■□□□□ 0.2
NCSTN-214ENST00000491390 USP19O94966 1318 aa16.31■□□□□ 0.2
NCSTN-214ENST00000491390 WASLO00401 505 aaPredicted RBP16.31■□□□□ 0.2
NCSTN-214ENST00000491390 NGDNQ8NEJ9 315 aaKnown RBP16.31■□□□□ 0.2
NCSTN-214ENST00000491390 MTFR1LQ9H019 292 aa16.31■□□□□ 0.2
NCSTN-214ENST00000491390 ITSN1Q15811 1721 aa16.31■□□□□ 0.2
NCSTN-214ENST00000491390 EVA1CP58658 441 aa16.3■□□□□ 0.2
NCSTN-214ENST00000491390 CRB1P82279 1406 aa16.29■□□□□ 0.2
NCSTN-214ENST00000491390 POLR3AO14802 1390 aaPredicted RBP16.28■□□□□ 0.2
NCSTN-214ENST00000491390 SLC15A2Q16348 729 aa16.28■□□□□ 0.2
NCSTN-214ENST00000491390 TOPAZ1Q8N9V7 1692 aa16.27■□□□□ 0.2
NCSTN-214ENST00000491390 PAPPAQ13219 1627 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms