RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 ZNF428Q96B54 188 aa18.42■□□□□ 0.54
HLA-DQB1-209ENST00000487676 VPS37CA5D8V6 355 aaPredicted RBP18.42■□□□□ 0.54
HLA-DQB1-209ENST00000487676 KIF20AO95235 890 aa18.42■□□□□ 0.54
HLA-DQB1-209ENST00000487676 CCDC192P0DO97 292 aa18.42■□□□□ 0.54
HLA-DQB1-209ENST00000487676 USP25Q9UHP3 1055 aa18.42■□□□□ 0.54
HLA-DQB1-209ENST00000487676 ZMYM3Q14202 1370 aa18.41■□□□□ 0.54
HLA-DQB1-209ENST00000487676 UVSSAQ2YD98 709 aa18.41■□□□□ 0.54
HLA-DQB1-209ENST00000487676 SPINK5Q9NQ38 1064 aaPredicted RBP18.41■□□□□ 0.54
HLA-DQB1-209ENST00000487676 FIBPO43427 364 aa18.41■□□□□ 0.54
HLA-DQB1-209ENST00000487676 RLBP1P12271 317 aa18.41■□□□□ 0.54
HLA-DQB1-209ENST00000487676 NOLC1Q14978 699 aaKnown RBP eCLIP18.41■□□□□ 0.54
HLA-DQB1-209ENST00000487676 CFAP70Q5T0N1 1121 aa18.41■□□□□ 0.54
HLA-DQB1-209ENST00000487676 SPDYE4A6NLX3 237 aa18.4■□□□□ 0.54
HLA-DQB1-209ENST00000487676 ZNF445P59923 1031 aa18.4■□□□□ 0.54
HLA-DQB1-209ENST00000487676 CC2D2AQ9P2K1 1620 aa18.4■□□□□ 0.54
HLA-DQB1-209ENST00000487676 NUCB1Q02818 461 aa18.4■□□□□ 0.54
HLA-DQB1-209ENST00000487676 GAS2L3Q86XJ1 694 aa18.4■□□□□ 0.54
HLA-DQB1-209ENST00000487676 GAS2L2Q8NHY3 880 aa18.4■□□□□ 0.54
HLA-DQB1-209ENST00000487676 BICRAQ9NZM4 1560 aa18.39■□□□□ 0.54
HLA-DQB1-209ENST00000487676 TESK2Q96S53 571 aa18.39■□□□□ 0.53
HLA-DQB1-209ENST00000487676 BICD2Q8TD16 824 aa18.39■□□□□ 0.53
HLA-DQB1-209ENST00000487676 ARHGEF12Q9NZN5 1544 aa18.39■□□□□ 0.53
HLA-DQB1-209ENST00000487676 ZNF500O60304 480 aaPredicted RBP18.38■□□□□ 0.53
HLA-DQB1-209ENST00000487676 BCL11BQ9C0K0 894 aaPredicted RBP18.38■□□□□ 0.53
HLA-DQB1-209ENST00000487676 SLC12A5Q9H2X9 1139 aa18.38■□□□□ 0.53
HLA-DQB1-209ENST00000487676 CCDC183Q5T5S1 534 aa18.37■□□□□ 0.53
HLA-DQB1-209ENST00000487676 DNMBPQ6XZF7 1577 aa18.37■□□□□ 0.53
HLA-DQB1-209ENST00000487676 HOMER1Q86YM7 354 aa18.37■□□□□ 0.53
HLA-DQB1-209ENST00000487676 RBSNQ9H1K0 784 aa18.37■□□□□ 0.53
HLA-DQB1-209ENST00000487676 KIF14Q15058 1648 aa18.37■□□□□ 0.53
HLA-DQB1-209ENST00000487676 ADCY5O95622 1261 aa18.37■□□□□ 0.53
HLA-DQB1-209ENST00000487676 CCDC27Q2M243 656 aa18.37■□□□□ 0.53
HLA-DQB1-209ENST00000487676 PIK3C2GO75747 1445 aa18.36■□□□□ 0.53
HLA-DQB1-209ENST00000487676 GPATCH3Q96I76 525 aa18.36■□□□□ 0.53
HLA-DQB1-209ENST00000487676 CWC15Q9P013 229 aaKnown RBP18.36■□□□□ 0.53
HLA-DQB1-209ENST00000487676 CALCOCO1Q9P1Z2 691 aa18.36■□□□□ 0.53
HLA-DQB1-209ENST00000487676 TNNQ9UQP3 1299 aa18.36■□□□□ 0.53
HLA-DQB1-209ENST00000487676 TMPOP42166 694 aaKnown RBP18.35■□□□□ 0.53
HLA-DQB1-209ENST00000487676 MNS1Q8NEH6 495 aa18.35■□□□□ 0.53
HLA-DQB1-209ENST00000487676 RBM42Q9BTD8 480 aaKnown RBP18.35■□□□□ 0.53
HLA-DQB1-209ENST00000487676 PRAG1Q86YV5 1406 aa18.35■□□□□ 0.53
HLA-DQB1-209ENST00000487676 ALDH1L2Q3SY69 923 aa18.35■□□□□ 0.53
HLA-DQB1-209ENST00000487676 RUFY2Q8WXA3 655 aa18.35■□□□□ 0.53
HLA-DQB1-209ENST00000487676 USP19O94966 1318 aa18.35■□□□□ 0.53
HLA-DQB1-209ENST00000487676 NPM1P06748 294 aaKnown RBP eCLIP18.35■□□□□ 0.53
HLA-DQB1-209ENST00000487676 GNL2Q13823 731 aaKnown RBP18.35■□□□□ 0.53
HLA-DQB1-209ENST00000487676 ZKSCAN1P17029 563 aaPredicted RBP18.34■□□□□ 0.53
HLA-DQB1-209ENST00000487676 PZPP20742 1482 aa18.34■□□□□ 0.53
HLA-DQB1-209ENST00000487676 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.34■□□□□ 0.53
HLA-DQB1-209ENST00000487676 PLEKHG5O94827 1062 aa18.34■□□□□ 0.53
HLA-DQB1-209ENST00000487676 NOM1Q5C9Z4 860 aaKnown RBP18.34■□□□□ 0.53
HLA-DQB1-209ENST00000487676 MYRIPQ8NFW9 859 aa18.34■□□□□ 0.53
HLA-DQB1-209ENST00000487676 TSPYL1Q9H0U9 437 aa18.34■□□□□ 0.53
HLA-DQB1-209ENST00000487676 GGNBP2Q9H3C7 697 aa18.34■□□□□ 0.53
HLA-DQB1-209ENST00000487676 NESP48681 1621 aa18.34■□□□□ 0.53
HLA-DQB1-209ENST00000487676 H3BQV1 296 aa18.34■□□□□ 0.53
HLA-DQB1-209ENST00000487676 IFFO2Q5TF58 517 aa18.34■□□□□ 0.53
HLA-DQB1-209ENST00000487676 ASXL1Q8IXJ9 1541 aa18.33■□□□□ 0.53
HLA-DQB1-209ENST00000487676 ERICH4A6NGS2 130 aa18.32■□□□□ 0.52
HLA-DQB1-209ENST00000487676 TWISTNBQ3B726 338 aaPredicted RBP18.32■□□□□ 0.52
HLA-DQB1-209ENST00000487676 ERBB4Q15303 1308 aa18.32■□□□□ 0.52
HLA-DQB1-209ENST00000487676 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.32■□□□□ 0.52
HLA-DQB1-209ENST00000487676 HSP90B1P14625 803 aaKnown RBP18.31■□□□□ 0.52
HLA-DQB1-209ENST00000487676 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.31■□□□□ 0.52
HLA-DQB1-209ENST00000487676 ZNF830Q96NB3 372 aaPredicted RBP18.31■□□□□ 0.52
HLA-DQB1-209ENST00000487676 COL17A1Q9UMD9 1497 aaPredicted RBP18.31■□□□□ 0.52
HLA-DQB1-209ENST00000487676 GCC2Q8IWJ2 1684 aa18.31■□□□□ 0.52
HLA-DQB1-209ENST00000487676 ABCC11Q96J66 1382 aa18.31■□□□□ 0.52
HLA-DQB1-209ENST00000487676 GGT6Q6P531 493 aa18.3■□□□□ 0.52
HLA-DQB1-209ENST00000487676 NSD3Q9BZ95 1437 aa18.3■□□□□ 0.52
HLA-DQB1-209ENST00000487676 NPHP1O15259 732 aa18.3■□□□□ 0.52
HLA-DQB1-209ENST00000487676 RPAP2Q8IXW5 612 aaPredicted RBP18.3■□□□□ 0.52
HLA-DQB1-209ENST00000487676 FEZ1Q99689 392 aa18.29■□□□□ 0.52
HLA-DQB1-209ENST00000487676 TTC12Q9H892 705 aaPredicted RBP18.29■□□□□ 0.52
HLA-DQB1-209ENST00000487676 CCAR2Q8N163 923 aaKnown RBP18.29■□□□□ 0.52
HLA-DQB1-209ENST00000487676 PRKAR2BP31323 418 aa18.29■□□□□ 0.52
HLA-DQB1-209ENST00000487676 SF3A1Q15459 793 aaKnown RBP18.29■□□□□ 0.52
HLA-DQB1-209ENST00000487676 PDCP20941 246 aa18.28■□□□□ 0.52
HLA-DQB1-209ENST00000487676 TIGD1Q96MW7 591 aa18.28■□□□□ 0.52
HLA-DQB1-209ENST00000487676 TNNT1P13805 278 aa18.28■□□□□ 0.52
HLA-DQB1-209ENST00000487676 RNF20Q5VTR2 975 aa18.28■□□□□ 0.52
HLA-DQB1-209ENST00000487676 UTP14CQ5TAP6 766 aaKnown RBP18.27■□□□□ 0.52
HLA-DQB1-209ENST00000487676 TNMDQ9H2S6 317 aa18.27■□□□□ 0.52
HLA-DQB1-209ENST00000487676 MAPK8IP2Q13387 824 aaPredicted RBP18.27■□□□□ 0.52
HLA-DQB1-209ENST00000487676 AEBP1Q8IUX7 1158 aa18.27■□□□□ 0.52
HLA-DQB1-209ENST00000487676 HMOX1P09601 288 aa18.27■□□□□ 0.52
HLA-DQB1-209ENST00000487676 TRMT2AQ8IZ69 625 aaKnown RBP18.27■□□□□ 0.52
HLA-DQB1-209ENST00000487676 ESF1Q9H501 851 aaKnown RBP18.27■□□□□ 0.52
HLA-DQB1-209ENST00000487676 IQGAP2Q13576 1575 aa18.27■□□□□ 0.52
HLA-DQB1-209ENST00000487676 HCLS1P14317 486 aaPredicted RBP18.27■□□□□ 0.51
HLA-DQB1-209ENST00000487676 KRT85P78386 507 aa18.26■□□□□ 0.51
HLA-DQB1-209ENST00000487676 NUP62CLQ9H1M0 184 aa18.26■□□□□ 0.51
HLA-DQB1-209ENST00000487676 ABCA5Q8WWZ7 1642 aa18.26■□□□□ 0.51
HLA-DQB1-209ENST00000487676 CCDC73Q6ZRK6 1079 aa18.26■□□□□ 0.51
HLA-DQB1-209ENST00000487676 GDPD2Q9HCC8 539 aa18.26■□□□□ 0.51
HLA-DQB1-209ENST00000487676 SCAF11Q99590 1463 aaKnown RBP18.26■□□□□ 0.51
HLA-DQB1-209ENST00000487676 ZNF521Q96K83 1311 aa18.26■□□□□ 0.51
HLA-DQB1-209ENST00000487676 VGFO15240 615 aaPredicted RBP18.26■□□□□ 0.51
HLA-DQB1-209ENST00000487676 HDAC5Q9UQL6 1122 aa18.26■□□□□ 0.51
HLA-DQB1-209ENST00000487676 C16orf45Q96MC5 204 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms